RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 MPNDQ8N594 471 aa22.44■■□□□ 1.18
PSPC1-201ENST00000338910 PAPPAQ13219 1627 aa22.44■■□□□ 1.18
PSPC1-201ENST00000338910 TNS2Q63HR2 1409 aa22.43■■□□□ 1.18
PSPC1-201ENST00000338910 CNTROBQ8N137 903 aa22.43■■□□□ 1.18
PSPC1-201ENST00000338910 PLBD2Q8NHP8 589 aa22.43■■□□□ 1.18
PSPC1-201ENST00000338910 IL17RAQ96F46 866 aa22.43■■□□□ 1.18
PSPC1-201ENST00000338910 MCCP23508 829 aa22.43■■□□□ 1.18
PSPC1-201ENST00000338910 TTC12Q9H892 705 aaPredicted RBP22.43■■□□□ 1.18
PSPC1-201ENST00000338910 ZHX1Q9UKY1 873 aaPredicted RBP22.43■■□□□ 1.18
PSPC1-201ENST00000338910 TTC41PQ6P2S7 1318 aa22.43■■□□□ 1.18
PSPC1-201ENST00000338910 GLRX3O76003 335 aaKnown RBP22.42■■□□□ 1.18
PSPC1-201ENST00000338910 TMEM87AQ8NBN3 555 aa22.42■■□□□ 1.18
PSPC1-201ENST00000338910 ECHDC1Q9NTX5 307 aa22.42■■□□□ 1.18
PSPC1-201ENST00000338910 A0A087WZG4 1122 aa22.42■■□□□ 1.18
PSPC1-201ENST00000338910 ADCY5O95622 1261 aa22.42■■□□□ 1.18
PSPC1-201ENST00000338910 TTLL7Q6ZT98 887 aa22.42■■□□□ 1.18
PSPC1-201ENST00000338910 TCHHQ07283 1943 aa22.42■■□□□ 1.18
PSPC1-201ENST00000338910 FOXD4L6Q3SYB3 417 aaPredicted RBP22.41■■□□□ 1.18
PSPC1-201ENST00000338910 FOXD4L3Q6VB84 417 aaPredicted RBP22.41■■□□□ 1.18
PSPC1-201ENST00000338910 WDR33Q9C0J8 1336 aaKnown RBP22.41■■□□□ 1.18
PSPC1-201ENST00000338910 USP42Q9H9J4 1324 aaKnown RBP22.41■■□□□ 1.18
PSPC1-201ENST00000338910 NOL8Q76FK4 1167 aaKnown RBP22.41■■□□□ 1.18
PSPC1-201ENST00000338910 EAF2Q96CJ1 260 aaPredicted RBP22.41■■□□□ 1.18
PSPC1-201ENST00000338910 CCDC8Q9H0W5 538 aaPredicted RBP22.41■■□□□ 1.18
PSPC1-201ENST00000338910 CCDC183Q5T5S1 534 aa22.4■■□□□ 1.18
PSPC1-201ENST00000338910 C17orf53Q8N3J3 647 aaPredicted RBP22.4■■□□□ 1.18
PSPC1-201ENST00000338910 KIF3AQ9Y496 699 aa22.4■■□□□ 1.18
PSPC1-201ENST00000338910 ATG3Q9NT62 314 aa22.4■■□□□ 1.18
PSPC1-201ENST00000338910 GPATCH3Q96I76 525 aa22.39■■□□□ 1.18
PSPC1-201ENST00000338910 PLCH1Q4KWH8 1693 aa22.39■■□□□ 1.18
PSPC1-201ENST00000338910 ARFGEF2Q9Y6D5 1785 aa22.39■■□□□ 1.17
PSPC1-201ENST00000338910 CWC27Q6UX04 472 aaKnown RBP22.39■■□□□ 1.17
PSPC1-201ENST00000338910 SYTL4Q96C24 671 aaPredicted RBP22.39■■□□□ 1.17
PSPC1-201ENST00000338910 RPAP1Q9BWH6 1393 aaPredicted RBP22.38■■□□□ 1.17
PSPC1-201ENST00000338910 SPATA31A1Q5TZJ5 1347 aa22.37■■□□□ 1.17
PSPC1-201ENST00000338910 HCLS1P14317 486 aaPredicted RBP22.37■■□□□ 1.17
PSPC1-201ENST00000338910 ZBTB3Q9H5J0 574 aa22.37■■□□□ 1.17
PSPC1-201ENST00000338910 TLR7Q9NYK1 1049 aaKnown RBP22.37■■□□□ 1.17
PSPC1-201ENST00000338910 ITGB4P16144 1822 aa22.37■■□□□ 1.17
PSPC1-201ENST00000338910 SGSM2O43147 1006 aa22.37■■□□□ 1.17
PSPC1-201ENST00000338910 UPF3BQ9BZI7 483 aaKnown RBP22.37■■□□□ 1.17
PSPC1-201ENST00000338910 UBAP1LF5GYI3 381 aa22.36■■□□□ 1.17
PSPC1-201ENST00000338910 LETM1O95202 739 aaPredicted RBP22.36■■□□□ 1.17
PSPC1-201ENST00000338910 DNAJC10Q8IXB1 793 aa22.36■■□□□ 1.17
PSPC1-201ENST00000338910 ZNF330Q9Y3S2 320 aaPredicted RBP22.36■■□□□ 1.17
PSPC1-201ENST00000338910 BCL2L12Q9HB09 334 aa22.36■■□□□ 1.17
PSPC1-201ENST00000338910 AFDNP55196 1824 aaKnown RBP22.36■■□□□ 1.17
PSPC1-201ENST00000338910 KDM4AO75164 1064 aa22.35■■□□□ 1.17
PSPC1-201ENST00000338910 CBX1P83916 185 aa22.35■■□□□ 1.17
PSPC1-201ENST00000338910 ATP2B3Q16720 1220 aa22.35■■□□□ 1.17
PSPC1-201ENST00000338910 PPP4R3BQ5MIZ7 849 aa22.35■■□□□ 1.17
PSPC1-201ENST00000338910 GTPBP4Q9BZE4 634 aaKnown RBP22.35■■□□□ 1.17
PSPC1-201ENST00000338910 BCL9O00512 1426 aa22.35■■□□□ 1.17
PSPC1-201ENST00000338910 DIAPH3Q9NSV4 1193 aa22.35■■□□□ 1.17
PSPC1-201ENST00000338910 FAM177BA6PVY3 158 aa22.34■■□□□ 1.17
PSPC1-201ENST00000338910 RFX5P48382 616 aaPredicted RBP22.34■■□□□ 1.17
PSPC1-201ENST00000338910 CASP7P55210 303 aa22.34■■□□□ 1.17
PSPC1-201ENST00000338910 PTPN12Q05209 780 aaKnown RBP22.34■■□□□ 1.17
PSPC1-201ENST00000338910 COPRSQ9NQ92 184 aa22.34■■□□□ 1.17
PSPC1-201ENST00000338910 CCDC9Q9Y3X0 531 aaKnown RBP22.34■■□□□ 1.17
PSPC1-201ENST00000338910 RABL6Q3YEC7 729 aaPredicted RBP22.33■■□□□ 1.17
PSPC1-201ENST00000338910 DDB1Q16531 1140 aa22.33■■□□□ 1.17
PSPC1-201ENST00000338910 LMBR1LQ6UX01 489 aa22.33■■□□□ 1.17
PSPC1-201ENST00000338910 CNPY2Q9Y2B0 182 aa22.33■■□□□ 1.17
PSPC1-201ENST00000338910 CHMP3Q9Y3E7 222 aa22.33■■□□□ 1.17
PSPC1-201ENST00000338910 HSPA4P34932 840 aa22.32■■□□□ 1.16
PSPC1-201ENST00000338910 KIAA1524Q8TCG1 905 aa22.32■■□□□ 1.16
PSPC1-201ENST00000338910 BOLA2Q9H3K6 86 aa22.32■■□□□ 1.16
PSPC1-201ENST00000338910 THRAP3Q9Y2W1 955 aaKnown RBP22.32■■□□□ 1.16
PSPC1-201ENST00000338910 NRAPQ86VF7 1730 aa22.32■■□□□ 1.16
PSPC1-201ENST00000338910 H7C1W4 665 aa22.32■■□□□ 1.16
PSPC1-201ENST00000338910 UBE2HP62256 183 aa22.32■■□□□ 1.16
PSPC1-201ENST00000338910 EVI5LQ96CN4 794 aa22.32■■□□□ 1.16
PSPC1-201ENST00000338910 SLC4A9Q96Q91 983 aa22.32■■□□□ 1.16
PSPC1-201ENST00000338910 FUCA2Q9BTY2 467 aa22.32■■□□□ 1.16
PSPC1-201ENST00000338910 TEX13AQ9BXU3 409 aaPredicted RBP22.32■■□□□ 1.16
PSPC1-201ENST00000338910 CWC25Q9NXE8 425 aaPredicted RBP22.32■■□□□ 1.16
PSPC1-201ENST00000338910 KLHL34Q8N239 644 aa22.31■■□□□ 1.16
PSPC1-201ENST00000338910 CDCA7Q9BWT1 371 aaPredicted RBP22.31■■□□□ 1.16
PSPC1-201ENST00000338910 LSG1Q9H089 658 aaKnown RBP22.31■■□□□ 1.16
PSPC1-201ENST00000338910 WNK3Q9BYP7 1800 aa22.31■■□□□ 1.16
PSPC1-201ENST00000338910 STARD3NLO95772 234 aa22.31■■□□□ 1.16
PSPC1-201ENST00000338910 TFCP2Q12800 502 aa22.31■■□□□ 1.16
PSPC1-201ENST00000338910 EPB41L2O43491 1005 aaKnown RBP22.3■■□□□ 1.16
PSPC1-201ENST00000338910 SPATA31A5Q5VU36 1347 aa22.3■■□□□ 1.16
PSPC1-201ENST00000338910 SPATA31A7Q8IWB4 1347 aa22.3■■□□□ 1.16
PSPC1-201ENST00000338910 RAD50Q92878 1312 aa22.3■■□□□ 1.16
PSPC1-201ENST00000338910 FOXO4P98177 505 aa22.3■■□□□ 1.16
PSPC1-201ENST00000338910 A0A0G2JS52 829 aa22.29■■□□□ 1.16
PSPC1-201ENST00000338910 ZSCAN22P10073 491 aaPredicted RBP22.29■■□□□ 1.16
PSPC1-201ENST00000338910 KCNF1Q9H3M0 494 aa22.29■■□□□ 1.16
PSPC1-201ENST00000338910 NUP188Q5SRE5 1749 aa22.29■■□□□ 1.16
PSPC1-201ENST00000338910 RUFY2Q8WXA3 655 aa22.29■■□□□ 1.16
PSPC1-201ENST00000338910 AP5Z1O43299 807 aa22.28■■□□□ 1.16
PSPC1-201ENST00000338910 KIF20AO95235 890 aa22.28■■□□□ 1.16
PSPC1-201ENST00000338910 PDCL2Q8N4E4 241 aa22.28■■□□□ 1.16
PSPC1-201ENST00000338910 ANKRD7Q92527 254 aa22.28■■□□□ 1.16
PSPC1-201ENST00000338910 LRP6O75581 1613 aa22.28■■□□□ 1.16
PSPC1-201ENST00000338910 SLIT2O94813 1529 aa22.28■■□□□ 1.16
PSPC1-201ENST00000338910 PYCARDQ9ULZ3 195 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms