RNA–Protein interactions for RNA: ENST00000335922.9

FGFR1-202, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 4,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-202ENST00000335922 HAND2P61296 217 aa17.13■□□□□ 0.33
FGFR1-202ENST00000335922 ANO6Q4KMQ2 910 aa17.13■□□□□ 0.33
FGFR1-202ENST00000335922 DNAJC25Q9H1X3 360 aa17.13■□□□□ 0.33
FGFR1-202ENST00000335922 CAVIN4Q5BKX8 364 aa17.12■□□□□ 0.33
FGFR1-202ENST00000335922 TEX35Q5T0J7 233 aa17.12■□□□□ 0.33
FGFR1-202ENST00000335922 TDO2P48775 406 aa17.12■□□□□ 0.33
FGFR1-202ENST00000335922 KIF1BO60333 1816 aa17.12■□□□□ 0.33
FGFR1-202ENST00000335922 MYOM2P54296 1465 aa17.12■□□□□ 0.33
FGFR1-202ENST00000335922 TET3O43151 1660 aa17.12■□□□□ 0.33
FGFR1-202ENST00000335922 SHROOM2Q13796 1616 aa17.12■□□□□ 0.33
FGFR1-202ENST00000335922 BRF1Q92994 677 aa17.12■□□□□ 0.33
FGFR1-202ENST00000335922 FAM89AQ96GI7 184 aa17.12■□□□□ 0.33
FGFR1-202ENST00000335922 HIP1O00291 1037 aa17.11■□□□□ 0.33
FGFR1-202ENST00000335922 KCNQ4P56696 695 aa17.11■□□□□ 0.33
FGFR1-202ENST00000335922 AKAP2Q9Y2D5 859 aa17.11■□□□□ 0.33
FGFR1-202ENST00000335922 DYNC1I1O14576 645 aa17.11■□□□□ 0.33
FGFR1-202ENST00000335922 LINS1Q8NG48 757 aa17.11■□□□□ 0.33
FGFR1-202ENST00000335922 SLC52A2Q9HAB3 445 aa17.11■□□□□ 0.33
FGFR1-202ENST00000335922 MAP3K4Q9Y6R4 1608 aa17.11■□□□□ 0.33
FGFR1-202ENST00000335922 ANKRD1Q15327 319 aa17.11■□□□□ 0.33
FGFR1-202ENST00000335922 CCDC82Q8N4S0 544 aa17.11■□□□□ 0.33
FGFR1-202ENST00000335922 EDC3Q96F86 508 aaKnown RBP17.11■□□□□ 0.33
FGFR1-202ENST00000335922 DDX21Q9NR30 783 aaKnown RBP eCLIP17.11■□□□□ 0.33
FGFR1-202ENST00000335922 SNX14Q9Y5W7 946 aa17.11■□□□□ 0.33
FGFR1-202ENST00000335922 NMIQ13287 307 aaPredicted RBP17.1■□□□□ 0.33
FGFR1-202ENST00000335922 HSP90AA4PQ58FG1 418 aa17.1■□□□□ 0.33
FGFR1-202ENST00000335922 FAM227BQ96M60 508 aa17.1■□□□□ 0.33
FGFR1-202ENST00000335922 POLR3DP05423 398 aaPredicted RBP17.1■□□□□ 0.33
FGFR1-202ENST00000335922 SOS1Q07889 1333 aaPredicted RBP17.1■□□□□ 0.33
FGFR1-202ENST00000335922 CLTCL1P53675 1640 aa17.1■□□□□ 0.33
FGFR1-202ENST00000335922 BRPF1P55201 1214 aaPredicted RBP17.1■□□□□ 0.33
FGFR1-202ENST00000335922 NLRP3Q96P20 1036 aa17.1■□□□□ 0.33
FGFR1-202ENST00000335922 QTRT2Q9H974 415 aaKnown RBP17.1■□□□□ 0.33
FGFR1-202ENST00000335922 USP6P35125 1406 aa17.1■□□□□ 0.33
FGFR1-202ENST00000335922 BRD1O95696 1058 aa17.1■□□□□ 0.33
FGFR1-202ENST00000335922 CDC5LQ99459 802 aaKnown RBP17.1■□□□□ 0.33
FGFR1-202ENST00000335922 NACAP1Q9BZK3 213 aa17.1■□□□□ 0.33
FGFR1-202ENST00000335922 ANAPC15P60006 121 aa17.09■□□□□ 0.33
FGFR1-202ENST00000335922 AIDAQ96BJ3 306 aa17.09■□□□□ 0.33
FGFR1-202ENST00000335922 TRERF1Q96PN7 1200 aa17.09■□□□□ 0.33
FGFR1-202ENST00000335922 PPP1R9BQ96SB3 815 aa17.09■□□□□ 0.33
FGFR1-202ENST00000335922 SH2B1Q9NRF2 756 aaPredicted RBP17.09■□□□□ 0.33
FGFR1-202ENST00000335922 USP16Q9Y5T5 823 aa17.09■□□□□ 0.33
FGFR1-202ENST00000335922 ERCC4Q92889 916 aaPredicted RBP17.09■□□□□ 0.33
FGFR1-202ENST00000335922 GOLIM4O00461 696 aa17.09■□□□□ 0.33
FGFR1-202ENST00000335922 RASEFQ8IZ41 740 aa17.09■□□□□ 0.33
FGFR1-202ENST00000335922 SCAND2PQ9GZW5 306 aaPredicted RBP17.09■□□□□ 0.33
FGFR1-202ENST00000335922 MINDY4BA8MYZ0 360 aa17.08■□□□□ 0.33
FGFR1-202ENST00000335922 GPS2Q13227 327 aa17.08■□□□□ 0.33
FGFR1-202ENST00000335922 SETD1BQ9UPS6 1966 aaKnown RBP17.08■□□□□ 0.33
FGFR1-202ENST00000335922 SERPINC1P01008 464 aa17.08■□□□□ 0.32
FGFR1-202ENST00000335922 MCM5P33992 734 aa17.08■□□□□ 0.32
FGFR1-202ENST00000335922 SART3Q15020 963 aaKnown RBP17.08■□□□□ 0.32
FGFR1-202ENST00000335922 EVI5LQ96CN4 794 aa17.08■□□□□ 0.32
FGFR1-202ENST00000335922 CDCA7Q9BWT1 371 aaPredicted RBP17.08■□□□□ 0.32
FGFR1-202ENST00000335922 NAT10Q9H0A0 1025 aaKnown RBP17.07■□□□□ 0.32
FGFR1-202ENST00000335922 USP44Q9H0E7 712 aa17.07■□□□□ 0.32
FGFR1-202ENST00000335922 PHKG2P15735 406 aa17.07■□□□□ 0.32
FGFR1-202ENST00000335922 SLC4A8Q2Y0W8 1093 aa17.07■□□□□ 0.32
FGFR1-202ENST00000335922 CCDC129Q6ZRS4 1044 aa17.07■□□□□ 0.32
FGFR1-202ENST00000335922 ARGLU1Q9NWB6 273 aaPredicted RBP17.07■□□□□ 0.32
FGFR1-202ENST00000335922 RNF17Q9BXT8 1623 aaKnown RBP17.07■□□□□ 0.32
FGFR1-202ENST00000335922 APBA3O96018 575 aa17.07■□□□□ 0.32
FGFR1-202ENST00000335922 SLC5A1P13866 664 aa17.07■□□□□ 0.32
FGFR1-202ENST00000335922 CFAP45Q9UL16 551 aa17.07■□□□□ 0.32
FGFR1-202ENST00000335922 DIP2CQ9Y2E4 1556 aa17.06■□□□□ 0.32
FGFR1-202ENST00000335922 IQGAP3Q86VI3 1631 aa17.06■□□□□ 0.32
FGFR1-202ENST00000335922 HMGB2P26583 209 aaKnown RBP17.06■□□□□ 0.32
FGFR1-202ENST00000335922 TYRO3Q06418 890 aa17.06■□□□□ 0.32
FGFR1-202ENST00000335922 PIBF1Q8WXW3 757 aa17.06■□□□□ 0.32
FGFR1-202ENST00000335922 TSR1Q2NL82 804 aaKnown RBP17.06■□□□□ 0.32
FGFR1-202ENST00000335922 DZIP1Q86YF9 867 aaKnown RBP17.06■□□□□ 0.32
FGFR1-202ENST00000335922 CCDC144CPQ8IYA2 1237 aa17.06■□□□□ 0.32
FGFR1-202ENST00000335922 FSIP1Q8NA03 581 aa17.06■□□□□ 0.32
FGFR1-202ENST00000335922 NUP133Q8WUM0 1156 aa17.06■□□□□ 0.32
FGFR1-202ENST00000335922 IRS4O14654 1257 aaPredicted RBP17.06■□□□□ 0.32
FGFR1-202ENST00000335922 INTS4Q96HW7 963 aaKnown RBP17.06■□□□□ 0.32
FGFR1-202ENST00000335922 ZNF396Q96N95 335 aaPredicted RBP17.06■□□□□ 0.32
FGFR1-202ENST00000335922 PTH1RQ03431 593 aa17.05■□□□□ 0.32
FGFR1-202ENST00000335922 PTPN14Q15678 1187 aa17.05■□□□□ 0.32
FGFR1-202ENST00000335922 CREB3L3Q68CJ9 461 aa17.05■□□□□ 0.32
FGFR1-202ENST00000335922 ZSCAN25Q6NSZ9 544 aa17.05■□□□□ 0.32
FGFR1-202ENST00000335922 CEP57L1Q8IYX8 460 aa17.05■□□□□ 0.32
FGFR1-202ENST00000335922 POLR1AO95602 1720 aaPredicted RBP17.05■□□□□ 0.32
FGFR1-202ENST00000335922 SGSM2O43147 1006 aa17.05■□□□□ 0.32
FGFR1-202ENST00000335922 CCDC152Q4G0S7 254 aa17.05■□□□□ 0.32
FGFR1-202ENST00000335922 TPTE2Q6XPS3 522 aa17.05■□□□□ 0.32
FGFR1-202ENST00000335922 TRAPPC3LQ5T215 181 aa17.05■□□□□ 0.32
FGFR1-202ENST00000335922 UTP14AQ9BVJ6 771 aaKnown RBP17.04■□□□□ 0.32
FGFR1-202ENST00000335922 ASAP1Q9ULH1 1129 aa17.04■□□□□ 0.32
FGFR1-202ENST00000335922 AXIN2Q9Y2T1 843 aa17.04■□□□□ 0.32
FGFR1-202ENST00000335922 FAM135BQ49AJ0 1406 aa17.04■□□□□ 0.32
FGFR1-202ENST00000335922 ERBB3P21860 1342 aa17.04■□□□□ 0.32
FGFR1-202ENST00000335922 ALDH1L1O75891 902 aa17.04■□□□□ 0.32
FGFR1-202ENST00000335922 SLC3A2P08195 630 aaKnown RBP17.04■□□□□ 0.32
FGFR1-202ENST00000335922 ST5P78524 1137 aa17.04■□□□□ 0.32
FGFR1-202ENST00000335922 ANKRD18AQ8IVF6 992 aa17.04■□□□□ 0.32
FGFR1-202ENST00000335922 NEK1Q96PY6 1258 aa17.04■□□□□ 0.32
FGFR1-202ENST00000335922 ZDHHC9Q9Y397 364 aa17.04■□□□□ 0.32
FGFR1-202ENST00000335922 TPM1P09493 284 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms