RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 GCKRQ14397 625 aa23.39■■□□□ 1.33
HLA-F-217ENST00000334668 SF3B3Q15393 1217 aaKnown RBP23.39■■□□□ 1.33
HLA-F-217ENST00000334668 TAF1P21675 1872 aa23.39■■□□□ 1.33
HLA-F-217ENST00000334668 CCDC88AQ3V6T2 1871 aa23.39■■□□□ 1.33
HLA-F-217ENST00000334668 H7C1W4 665 aa23.38■■□□□ 1.33
HLA-F-217ENST00000334668 C21orf2O43822 256 aa23.38■■□□□ 1.33
HLA-F-217ENST00000334668 HSP90B1P14625 803 aaKnown RBP23.38■■□□□ 1.33
HLA-F-217ENST00000334668 RTL5Q5HYW3 569 aaPredicted RBP23.38■■□□□ 1.33
HLA-F-217ENST00000334668 BCL2L13Q9BXK5 485 aa23.38■■□□□ 1.33
HLA-F-217ENST00000334668 SOGA3Q5TF21 947 aa23.37■■□□□ 1.33
HLA-F-217ENST00000334668 SMC4Q9NTJ3 1288 aa23.37■■□□□ 1.33
HLA-F-217ENST00000334668 CASP7P55210 303 aa23.36■■□□□ 1.33
HLA-F-217ENST00000334668 ABCC4O15439 1325 aa23.35■■□□□ 1.33
HLA-F-217ENST00000334668 SNED1Q8TER0 1413 aa23.35■■□□□ 1.33
HLA-F-217ENST00000334668 NFKBIEO00221 500 aa23.35■■□□□ 1.33
HLA-F-217ENST00000334668 PDE8AO60658 829 aa23.35■■□□□ 1.33
HLA-F-217ENST00000334668 JARID2Q92833 1246 aaPredicted RBP23.35■■□□□ 1.33
HLA-F-217ENST00000334668 LTBP3Q9NS15 1303 aa23.34■■□□□ 1.33
HLA-F-217ENST00000334668 DICER1Q9UPY3 1922 aaKnown RBP23.34■■□□□ 1.33
HLA-F-217ENST00000334668 ALDH1L1O75891 902 aa23.34■■□□□ 1.33
HLA-F-217ENST00000334668 SPDYE2BA6NHP3 402 aa23.33■■□□□ 1.33
HLA-F-217ENST00000334668 SPDYE6P0CI01 402 aa23.33■■□□□ 1.33
HLA-F-217ENST00000334668 SPDYE2Q495Y8 402 aa23.33■■□□□ 1.33
HLA-F-217ENST00000334668 DDX46Q7L014 1031 aaKnown RBP23.33■■□□□ 1.33
HLA-F-217ENST00000334668 PLA2G12BQ9BX93 195 aa23.33■■□□□ 1.33
HLA-F-217ENST00000334668 BBOX1O75936 387 aa23.32■■□□□ 1.32
HLA-F-217ENST00000334668 PRELPP51888 382 aa23.32■■□□□ 1.32
HLA-F-217ENST00000334668 RASSF7Q02833 373 aa23.32■■□□□ 1.32
HLA-F-217ENST00000334668 CCDC93Q567U6 631 aa23.32■■□□□ 1.32
HLA-F-217ENST00000334668 UBE3BQ7Z3V4 1068 aa23.32■■□□□ 1.32
HLA-F-217ENST00000334668 GRAPQ13588 217 aa23.31■■□□□ 1.32
HLA-F-217ENST00000334668 CC2D2BQ6DHV5 1058 aa23.31■■□□□ 1.32
HLA-F-217ENST00000334668 OLFM4Q6UX06 510 aa23.31■■□□□ 1.32
HLA-F-217ENST00000334668 GRAPLQ8TC17 118 aaPredicted RBP23.31■■□□□ 1.32
HLA-F-217ENST00000334668 SRCIN1Q9C0H9 1055 aa23.31■■□□□ 1.32
HLA-F-217ENST00000334668 PPEF1O14829 653 aaPredicted RBP23.3■■□□□ 1.32
HLA-F-217ENST00000334668 C9orf131Q5VYM1 1079 aa23.3■■□□□ 1.32
HLA-F-217ENST00000334668 SLC4A10Q6U841 1118 aa23.3■■□□□ 1.32
HLA-F-217ENST00000334668 RTKN2Q8IZC4 609 aa23.3■■□□□ 1.32
HLA-F-217ENST00000334668 NOB1Q9ULX3 412 aaKnown RBP23.3■■□□□ 1.32
HLA-F-217ENST00000334668 COL4A1P02462 1669 aa23.29■■□□□ 1.32
HLA-F-217ENST00000334668 LMNB1P20700 586 aa23.29■■□□□ 1.32
HLA-F-217ENST00000334668 CCDC152Q4G0S7 254 aa23.29■■□□□ 1.32
HLA-F-217ENST00000334668 GRIPAP1Q4V328 841 aa23.29■■□□□ 1.32
HLA-F-217ENST00000334668 ARHGAP45Q92619 1136 aa23.29■■□□□ 1.32
HLA-F-217ENST00000334668 ATP6V0A2Q9Y487 856 aa23.29■■□□□ 1.32
HLA-F-217ENST00000334668 LRRC37AA6NMS7 1700 aa23.28■■□□□ 1.32
HLA-F-217ENST00000334668 CTSWP56202 376 aa23.28■■□□□ 1.32
HLA-F-217ENST00000334668 TMC4Q7Z404 712 aa23.28■■□□□ 1.32
HLA-F-217ENST00000334668 TTLL11Q8NHH1 800 aa23.28■■□□□ 1.32
HLA-F-217ENST00000334668 TAOK3Q9H2K8 898 aa23.28■■□□□ 1.32
HLA-F-217ENST00000334668 KIF16BQ96L93 1317 aa23.28■■□□□ 1.32
HLA-F-217ENST00000334668 RTL9Q8NET4 1388 aa23.27■■□□□ 1.32
HLA-F-217ENST00000334668 GRM8O00222 908 aa23.27■■□□□ 1.32
HLA-F-217ENST00000334668 SLC51AQ86UW1 340 aa23.27■■□□□ 1.32
HLA-F-217ENST00000334668 SP8Q8IXZ3 490 aa23.27■■□□□ 1.32
HLA-F-217ENST00000334668 CELF1Q92879 486 aaKnown RBP23.27■■□□□ 1.32
HLA-F-217ENST00000334668 UTYO14607 1347 aa23.27■■□□□ 1.32
HLA-F-217ENST00000334668 BCAR3O75815 825 aa23.26■■□□□ 1.31
HLA-F-217ENST00000334668 CSF1RP07333 972 aa23.26■■□□□ 1.31
HLA-F-217ENST00000334668 FKBP4Q02790 459 aaKnown RBP eCLIP23.26■■□□□ 1.31
HLA-F-217ENST00000334668 PSMD1Q99460 953 aa23.26■■□□□ 1.31
HLA-F-217ENST00000334668 API5Q9BZZ5 524 aaKnown RBP23.26■■□□□ 1.31
HLA-F-217ENST00000334668 RNF181Q9P0P0 153 aa23.26■■□□□ 1.31
HLA-F-217ENST00000334668 RPS8P62241 208 aaKnown RBP23.25■■□□□ 1.31
HLA-F-217ENST00000334668 ZNF784Q8NCA9 323 aaPredicted RBP23.25■■□□□ 1.31
HLA-F-217ENST00000334668 SEC31BQ9NQW1 1179 aa23.25■■□□□ 1.31
HLA-F-217ENST00000334668 C9orf78Q9NZ63 289 aaPredicted RBP23.24■■□□□ 1.31
HLA-F-217ENST00000334668 ZC3H4Q9UPT8 1303 aaKnown RBP23.24■■□□□ 1.31
HLA-F-217ENST00000334668 FOXO4P98177 505 aa23.23■■□□□ 1.31
HLA-F-217ENST00000334668 TIAM2Q8IVF5 1701 aa23.22■■□□□ 1.31
HLA-F-217ENST00000334668 RTFDC1Q9BY42 306 aaPredicted RBP23.22■■□□□ 1.31
HLA-F-217ENST00000334668 GREM2Q9H772 168 aa23.22■■□□□ 1.31
HLA-F-217ENST00000334668 IPO8O15397 1037 aaKnown RBP23.21■■□□□ 1.31
HLA-F-217ENST00000334668 CCT4P50991 539 aaKnown RBP23.21■■□□□ 1.31
HLA-F-217ENST00000334668 CCDC85AQ96PX6 553 aaPredicted RBP23.21■■□□□ 1.31
HLA-F-217ENST00000334668 USP44Q9H0E7 712 aa23.21■■□□□ 1.31
HLA-F-217ENST00000334668 LTBP1Q14766 1721 aa23.21■■□□□ 1.31
HLA-F-217ENST00000334668 NBPF7P0C2Y1 421 aaPredicted RBP23.2■■□□□ 1.3
HLA-F-217ENST00000334668 KAZALD1Q96I82 304 aa23.2■■□□□ 1.3
HLA-F-217ENST00000334668 TMX4Q9H1E5 349 aaPredicted RBP23.2■■□□□ 1.3
HLA-F-217ENST00000334668 ZNF277Q9NRM2 450 aaPredicted RBP23.2■■□□□ 1.3
HLA-F-217ENST00000334668 TRIM27P14373 513 aa23.19■■□□□ 1.3
HLA-F-217ENST00000334668 EPHA10Q5JZY3 1008 aa23.19■■□□□ 1.3
HLA-F-217ENST00000334668 ATF7IPQ6VMQ6 1270 aa23.19■■□□□ 1.3
HLA-F-217ENST00000334668 CDC5LQ99459 802 aaKnown RBP23.19■■□□□ 1.3
HLA-F-217ENST00000334668 SPEF2Q9C093 1822 aa23.19■■□□□ 1.3
HLA-F-217ENST00000334668 INTS3Q68E01 1043 aaKnown RBP23.18■■□□□ 1.3
HLA-F-217ENST00000334668 ANKRD18AQ8IVF6 992 aa23.18■■□□□ 1.3
HLA-F-217ENST00000334668 MPNDQ8N594 471 aa23.18■■□□□ 1.3
HLA-F-217ENST00000334668 SUCLG2Q96I99 432 aa23.18■■□□□ 1.3
HLA-F-217ENST00000334668 DUOX1Q9NRD9 1551 aa23.18■■□□□ 1.3
HLA-F-217ENST00000334668 PITPNM1O00562 1244 aa23.17■■□□□ 1.3
HLA-F-217ENST00000334668 ITGA6P23229 1130 aa23.17■■□□□ 1.3
HLA-F-217ENST00000334668 IARSP41252 1262 aaKnown RBP23.17■■□□□ 1.3
HLA-F-217ENST00000334668 FAM161AQ3B820 660 aa23.17■■□□□ 1.3
HLA-F-217ENST00000334668 VPS33BQ9H267 617 aa23.17■■□□□ 1.3
HLA-F-217ENST00000334668 LMBR1LQ6UX01 489 aa23.16■■□□□ 1.3
HLA-F-217ENST00000334668 DPP8Q6V1X1 898 aaPredicted RBP23.16■■□□□ 1.3
HLA-F-217ENST00000334668 BSDC1Q9NW68 430 aaPredicted RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms