RNA–Protein interactions for RNA: ENST00000333256.10

TSSC4-201, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,686 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-201ENST00000333256 LAMB2P55268 1798 aa23.36■■□□□ 1.33
TSSC4-201ENST00000333256 CHRNA5P30532 468 aa23.36■■□□□ 1.33
TSSC4-201ENST00000333256 RIC1Q4ADV7 1423 aa23.36■■□□□ 1.33
TSSC4-201ENST00000333256 PDE6BP35913 854 aa23.35■■□□□ 1.33
TSSC4-201ENST00000333256 SF3B3Q15393 1217 aaKnown RBP23.35■■□□□ 1.33
TSSC4-201ENST00000333256 SEC31BQ9NQW1 1179 aa23.35■■□□□ 1.33
TSSC4-201ENST00000333256 SRGAP3O43295 1099 aa23.35■■□□□ 1.33
TSSC4-201ENST00000333256 CRY2Q49AN0 593 aa23.35■■□□□ 1.33
TSSC4-201ENST00000333256 CCDC152Q4G0S7 254 aa23.35■■□□□ 1.33
TSSC4-201ENST00000333256 SIRT2Q8IXJ6 389 aa23.35■■□□□ 1.33
TSSC4-201ENST00000333256 KLRG2A4D1S0 409 aaPredicted RBP23.34■■□□□ 1.33
TSSC4-201ENST00000333256 C2CD5Q86YS7 1000 aa23.34■■□□□ 1.33
TSSC4-201ENST00000333256 ITGA6P23229 1130 aa23.33■■□□□ 1.33
TSSC4-201ENST00000333256 ATP8B2P98198 1209 aa23.33■■□□□ 1.33
TSSC4-201ENST00000333256 KLHDC4Q8TBB5 520 aa23.33■■□□□ 1.33
TSSC4-201ENST00000333256 RPGRQ92834 1020 aaKnown RBP23.33■■□□□ 1.33
TSSC4-201ENST00000333256 SRGNP10124 158 aa23.32■■□□□ 1.32
TSSC4-201ENST00000333256 MTX1Q13505 466 aa23.32■■□□□ 1.32
TSSC4-201ENST00000333256 A0A0G2JLW4 131 aa23.32■■□□□ 1.32
TSSC4-201ENST00000333256 H0YIN7 160 aa23.32■■□□□ 1.32
TSSC4-201ENST00000333256 IFIT5Q13325 482 aaKnown RBP23.32■■□□□ 1.32
TSSC4-201ENST00000333256 AAMPQ13685 434 aa23.32■■□□□ 1.32
TSSC4-201ENST00000333256 CCDC57Q2TAC2 916 aa23.32■■□□□ 1.32
TSSC4-201ENST00000333256 RPAP2Q8IXW5 612 aaPredicted RBP23.32■■□□□ 1.32
TSSC4-201ENST00000333256 ZNF594Q96JF6 807 aaPredicted RBP23.32■■□□□ 1.32
TSSC4-201ENST00000333256 MYH3P11055 1940 aa23.31■■□□□ 1.32
TSSC4-201ENST00000333256 COL4A1P02462 1669 aa23.3■■□□□ 1.32
TSSC4-201ENST00000333256 DPEP1P16444 411 aa23.3■■□□□ 1.32
TSSC4-201ENST00000333256 DDX46Q7L014 1031 aaKnown RBP23.3■■□□□ 1.32
TSSC4-201ENST00000333256 ZNF622Q969S3 477 aaKnown RBP eCLIP23.3■■□□□ 1.32
TSSC4-201ENST00000333256 FHDC1Q9C0D6 1143 aaPredicted RBP23.3■■□□□ 1.32
TSSC4-201ENST00000333256 WWC3Q9ULE0 1092 aa23.3■■□□□ 1.32
TSSC4-201ENST00000333256 PA2G4Q9UQ80 394 aaKnown RBP23.3■■□□□ 1.32
TSSC4-201ENST00000333256 CD2APQ9Y5K6 639 aa23.3■■□□□ 1.32
TSSC4-201ENST00000333256 COL11A2P13942 1736 aaPredicted RBP23.3■■□□□ 1.32
TSSC4-201ENST00000333256 ANKRD18BA2A2Z9 1011 aa23.29■■□□□ 1.32
TSSC4-201ENST00000333256 CELF1Q92879 486 aaKnown RBP23.29■■□□□ 1.32
TSSC4-201ENST00000333256 NPR1P16066 1061 aa23.28■■□□□ 1.32
TSSC4-201ENST00000333256 RFX5P48382 616 aaPredicted RBP23.28■■□□□ 1.32
TSSC4-201ENST00000333256 NLGN2Q8NFZ4 835 aa23.28■■□□□ 1.32
TSSC4-201ENST00000333256 SSH3Q8TE77 659 aa23.28■■□□□ 1.32
TSSC4-201ENST00000333256 GOLGB1Q14789 3259 aaKnown RBP23.28■■□□□ 1.32
TSSC4-201ENST00000333256 POLA2Q14181 598 aa23.28■■□□□ 1.32
TSSC4-201ENST00000333256 TAF7LQ5H9L4 462 aa23.28■■□□□ 1.32
TSSC4-201ENST00000333256 MASTLQ96GX5 879 aa23.28■■□□□ 1.32
TSSC4-201ENST00000333256 RBM17Q96I25 401 aaKnown RBP23.28■■□□□ 1.32
TSSC4-201ENST00000333256 SIL1Q9H173 461 aa23.28■■□□□ 1.32
TSSC4-201ENST00000333256 RTL9Q8NET4 1388 aa23.27■■□□□ 1.32
TSSC4-201ENST00000333256 KIF13BQ9NQT8 1826 aa23.27■■□□□ 1.32
TSSC4-201ENST00000333256 HOXA10P31260 410 aaPredicted RBP23.27■■□□□ 1.32
TSSC4-201ENST00000333256 SLC51AQ86UW1 340 aa23.27■■□□□ 1.32
TSSC4-201ENST00000333256 KCNA3P22001 575 aa23.26■■□□□ 1.31
TSSC4-201ENST00000333256 TGFB2P61812 414 aa23.26■■□□□ 1.31
TSSC4-201ENST00000333256 PTPN12Q05209 780 aaKnown RBP23.26■■□□□ 1.31
TSSC4-201ENST00000333256 TAF1P21675 1872 aa23.26■■□□□ 1.31
TSSC4-201ENST00000333256 HMMRO75330 724 aa23.25■■□□□ 1.31
TSSC4-201ENST00000333256 CDC5LQ99459 802 aaKnown RBP23.25■■□□□ 1.31
TSSC4-201ENST00000333256 GRAPQ13588 217 aa23.25■■□□□ 1.31
TSSC4-201ENST00000333256 ANKRD18AQ8IVF6 992 aa23.25■■□□□ 1.31
TSSC4-201ENST00000333256 GRAPLQ8TC17 118 aaPredicted RBP23.25■■□□□ 1.31
TSSC4-201ENST00000333256 PUS3Q9BZE2 481 aaKnown RBP23.25■■□□□ 1.31
TSSC4-201ENST00000333256 IGHDP01880 384 aa23.24■■□□□ 1.31
TSSC4-201ENST00000333256 RPS8P62241 208 aaKnown RBP23.24■■□□□ 1.31
TSSC4-201ENST00000333256 STYK1Q6J9G0 422 aa23.24■■□□□ 1.31
TSSC4-201ENST00000333256 CRAMP1Q96RY5 1269 aa23.24■■□□□ 1.31
TSSC4-201ENST00000333256 PDZRN3Q9UPQ7 1066 aa23.24■■□□□ 1.31
TSSC4-201ENST00000333256 LDHAL6AQ6ZMR3 332 aa23.23■■□□□ 1.31
TSSC4-201ENST00000333256 EXOC6BQ9Y2D4 811 aa23.23■■□□□ 1.31
TSSC4-201ENST00000333256 KIAA1551Q9HCM1 1747 aa23.23■■□□□ 1.31
TSSC4-201ENST00000333256 SURF6O75683 361 aaKnown RBP23.22■■□□□ 1.31
TSSC4-201ENST00000333256 IGHMBP2P38935 993 aaKnown RBP23.22■■□□□ 1.31
TSSC4-201ENST00000333256 LRRC24Q50LG9 513 aa23.22■■□□□ 1.31
TSSC4-201ENST00000333256 MPHOSPH8Q99549 860 aa23.22■■□□□ 1.31
TSSC4-201ENST00000333256 SYT17Q9BSW7 474 aa23.22■■□□□ 1.31
TSSC4-201ENST00000333256 COPRSQ9NQ92 184 aa23.22■■□□□ 1.31
TSSC4-201ENST00000333256 ALDH1B1P30837 517 aa23.22■■□□□ 1.31
TSSC4-201ENST00000333256 ERICH6BQ5W0A0 696 aa23.22■■□□□ 1.31
TSSC4-201ENST00000333256 ZNF219Q9P2Y4 722 aaPredicted RBP23.22■■□□□ 1.31
TSSC4-201ENST00000333256 GTF3C3Q9Y5Q9 886 aa23.22■■□□□ 1.31
TSSC4-201ENST00000333256 APBB1O00213 710 aa23.21■■□□□ 1.31
TSSC4-201ENST00000333256 HDAC1Q13547 482 aaPredicted RBP23.21■■□□□ 1.31
TSSC4-201ENST00000333256 PRPF40BQ6NWY9 871 aaKnown RBP23.21■■□□□ 1.31
TSSC4-201ENST00000333256 CNNM1Q9NRU3 951 aa23.21■■□□□ 1.31
TSSC4-201ENST00000333256 B4GALNT3Q6L9W6 998 aa23.2■■□□□ 1.3
TSSC4-201ENST00000333256 OLFM4Q6UX06 510 aa23.2■■□□□ 1.3
TSSC4-201ENST00000333256 CNKSR1Q969H4 720 aa23.2■■□□□ 1.3
TSSC4-201ENST00000333256 RWDD1Q9H446 243 aaPredicted RBP23.2■■□□□ 1.3
TSSC4-201ENST00000333256 PIM2Q9P1W9 311 aa23.2■■□□□ 1.3
TSSC4-201ENST00000333256 PPEF1O14829 653 aaPredicted RBP23.19■■□□□ 1.3
TSSC4-201ENST00000333256 TTLL6Q8N841 843 aa23.19■■□□□ 1.3
TSSC4-201ENST00000333256 CCDC136Q96JN2 1154 aa23.19■■□□□ 1.3
TSSC4-201ENST00000333256 EYA2O00167 538 aa23.19■■□□□ 1.3
TSSC4-201ENST00000333256 BBOX1O75936 387 aa23.19■■□□□ 1.3
TSSC4-201ENST00000333256 OS9Q13438 667 aaPredicted RBP23.19■■□□□ 1.3
TSSC4-201ENST00000333256 ATG9AQ7Z3C6 839 aa23.19■■□□□ 1.3
TSSC4-201ENST00000333256 BSDC1Q9NW68 430 aaPredicted RBP23.19■■□□□ 1.3
TSSC4-201ENST00000333256 PPP4R2Q9NY27 417 aa23.19■■□□□ 1.3
TSSC4-201ENST00000333256 LRP5O75197 1615 aa23.19■■□□□ 1.3
TSSC4-201ENST00000333256 G3BP1Q13283 466 aaKnown RBP eCLIP23.18■■□□□ 1.3
TSSC4-201ENST00000333256 BCL11AQ9H165 835 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms