RNA–Protein interactions for RNA: ENST00000327578.9

PCM1-202, Transcript of pericentriolar material 1, humanhuman

TSL 5 BASIC

Gene PCM1, Length 8,287 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-202ENST00000327578 CCDC8Q9H0W5 538 aaPredicted RBP15.67■□□□□ 0.1
PCM1-202ENST00000327578 ARID5AQ03989 594 aa15.67■□□□□ 0.1
PCM1-202ENST00000327578 KLHL40Q2TBA0 621 aa15.67■□□□□ 0.1
PCM1-202ENST00000327578 CEP85LQ5SZL2 805 aa15.67■□□□□ 0.1
PCM1-202ENST00000327578 UBLCP1Q8WVY7 318 aaPredicted RBP15.67■□□□□ 0.1
PCM1-202ENST00000327578 GTF3C6Q969F1 213 aa15.67■□□□□ 0.1
PCM1-202ENST00000327578 TRIM7Q9C029 511 aa15.67■□□□□ 0.1
PCM1-202ENST00000327578 VAT1LQ9HCJ6 419 aa15.67■□□□□ 0.1
PCM1-202ENST00000327578 GBP1P32455 592 aa15.67■□□□□ 0.1
PCM1-202ENST00000327578 TBC1D9Q6ZT07 1266 aa15.67■□□□□ 0.1
PCM1-202ENST00000327578 RUSC2Q8N2Y8 1516 aa15.67■□□□□ 0.1
PCM1-202ENST00000327578 PCK1P35558 622 aa15.67■□□□□ 0.1
PCM1-202ENST00000327578 STAT6P42226 847 aa15.67■□□□□ 0.1
PCM1-202ENST00000327578 GNAT3A8MTJ3 354 aa15.67■□□□□ 0.1
PCM1-202ENST00000327578 TACC1O75410 805 aa15.67■□□□□ 0.1
PCM1-202ENST00000327578 CCDC174Q6PII3 467 aa15.67■□□□□ 0.1
PCM1-202ENST00000327578 TMOD2Q9NZR1 351 aa15.67■□□□□ 0.1
PCM1-202ENST00000327578 CNPY2Q9Y2B0 182 aa15.67■□□□□ 0.1
PCM1-202ENST00000327578 MAP3K12Q12852 859 aa15.67■□□□□ 0.1
PCM1-202ENST00000327578 ERCC3P19447 782 aa15.67■□□□□ 0.1
PCM1-202ENST00000327578 SETDB1Q15047 1291 aa15.67■□□□□ 0.1
PCM1-202ENST00000327578 TMEM87AQ8NBN3 555 aa15.67■□□□□ 0.1
PCM1-202ENST00000327578 TMPOP42166 694 aaKnown RBP15.66■□□□□ 0.1
PCM1-202ENST00000327578 AOPEPQ8N6M6 819 aa15.66■□□□□ 0.1
PCM1-202ENST00000327578 SLC26A6Q9BXS9 759 aa15.66■□□□□ 0.1
PCM1-202ENST00000327578 CCDC186Q7Z3E2 898 aa15.66■□□□□ 0.1
PCM1-202ENST00000327578 CIB2O75838 187 aa15.66■□□□□ 0.1
PCM1-202ENST00000327578 ZSCAN16Q9H4T2 348 aaPredicted RBP15.66■□□□□ 0.1
PCM1-202ENST00000327578 PLEKHH2Q8IVE3 1493 aa15.66■□□□□ 0.1
PCM1-202ENST00000327578 MYCNP04198 464 aaPredicted RBP15.66■□□□□ 0.1
PCM1-202ENST00000327578 HDXQ7Z353 690 aa15.66■□□□□ 0.1
PCM1-202ENST00000327578 PPFIA3O75145 1194 aa15.66■□□□□ 0.1
PCM1-202ENST00000327578 CFAP157Q5JU67 520 aa15.66■□□□□ 0.1
PCM1-202ENST00000327578 CFAP70Q5T0N1 1121 aa15.66■□□□□ 0.1
PCM1-202ENST00000327578 CCDC50Q8IVM0 306 aa15.66■□□□□ 0.1
PCM1-202ENST00000327578 ANKIB1Q9P2G1 1089 aa15.66■□□□□ 0.1
PCM1-202ENST00000327578 USP16Q9Y5T5 823 aa15.66■□□□□ 0.1
PCM1-202ENST00000327578 METAP2P50579 478 aaKnown RBP eCLIP15.65■□□□□ 0.1
PCM1-202ENST00000327578 KARSQ15046 597 aaKnown RBP15.65■□□□□ 0.1
PCM1-202ENST00000327578 A0A1B0GUA9 196 aa15.65■□□□□ 0.1
PCM1-202ENST00000327578 GJC1P36383 396 aa15.65■□□□□ 0.1
PCM1-202ENST00000327578 PRPHP41219 470 aa15.65■□□□□ 0.1
PCM1-202ENST00000327578 INTS8Q75QN2 995 aaKnown RBP15.65■□□□□ 0.1
PCM1-202ENST00000327578 C20orf194Q5TEA3 1177 aa15.65■□□□□ 0.1
PCM1-202ENST00000327578 RRAGBQ5VZM2 374 aa15.65■□□□□ 0.1
PCM1-202ENST00000327578 OGFRQ9NZT2 677 aa15.65■□□□□ 0.1
PCM1-202ENST00000327578 B4GALNT4Q76KP1 1039 aa15.65■□□□□ 0.1
PCM1-202ENST00000327578 ATP2A1O14983 1001 aa15.65■□□□□ 0.1
PCM1-202ENST00000327578 DUSP27Q5VZP5 1158 aa15.65■□□□□ 0.1
PCM1-202ENST00000327578 SLC4A8Q2Y0W8 1093 aa15.65■□□□□ 0.1
PCM1-202ENST00000327578 USP48Q86UV5 1035 aa15.65■□□□□ 0.1
PCM1-202ENST00000327578 VIMP08670 466 aaKnown RBP15.65■□□□□ 0.1
PCM1-202ENST00000327578 RNF41Q9H4P4 317 aaPredicted RBP15.65■□□□□ 0.1
PCM1-202ENST00000327578 MYD88Q99836 296 aa15.64■□□□□ 0.09
PCM1-202ENST00000327578 CLNS1AP54105 237 aaKnown RBP15.64■□□□□ 0.09
PCM1-202ENST00000327578 KIF5AQ12840 1032 aa15.64■□□□□ 0.09
PCM1-202ENST00000327578 IARSP41252 1262 aaKnown RBP15.64■□□□□ 0.09
PCM1-202ENST00000327578 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.64■□□□□ 0.096e-8■■□□□ 11.8
PCM1-202ENST00000327578 RAB11FIP4Q86YS3 637 aa15.64■□□□□ 0.09
PCM1-202ENST00000327578 ZSCAN22P10073 491 aaPredicted RBP15.64■□□□□ 0.09
PCM1-202ENST00000327578 CCDC184Q52MB2 194 aa15.64■□□□□ 0.09
PCM1-202ENST00000327578 MICU3Q86XE3 530 aa15.64■□□□□ 0.09
PCM1-202ENST00000327578 ZNF644Q9H582 1327 aaPredicted RBP15.64■□□□□ 0.09
PCM1-202ENST00000327578 TTF1Q15361 905 aaPredicted RBP15.64■□□□□ 0.09
PCM1-202ENST00000327578 ZNF569Q5MCW4 686 aa15.64■□□□□ 0.09
PCM1-202ENST00000327578 PPP1R12CQ9BZL4 782 aa15.64■□□□□ 0.09
PCM1-202ENST00000327578 FAM114A2Q9NRY5 505 aa15.64■□□□□ 0.09
PCM1-202ENST00000327578 TXNDC16Q9P2K2 825 aa15.64■□□□□ 0.09
PCM1-202ENST00000327578 TUBB4BP68371 445 aa15.63■□□□□ 0.09
PCM1-202ENST00000327578 PPFIBP2Q8ND30 876 aa15.63■□□□□ 0.09
PCM1-202ENST00000327578 EVI5LQ96CN4 794 aa15.63■□□□□ 0.09
PCM1-202ENST00000327578 LRRC9Q6ZRR7 1453 aa15.63■□□□□ 0.09
PCM1-202ENST00000327578 GMNNO75496 209 aa15.63■□□□□ 0.09
PCM1-202ENST00000327578 CACNA2D3Q8IZS8 1091 aa15.63■□□□□ 0.09
PCM1-202ENST00000327578 MRVI1Q9Y6F6 885 aa15.63■□□□□ 0.09
PCM1-202ENST00000327578 EEF2P13639 858 aaKnown RBP15.63■□□□□ 0.09
PCM1-202ENST00000327578 SATB1Q01826 763 aa15.63■□□□□ 0.09
PCM1-202ENST00000327578 NFE2L2Q16236 605 aa15.63■□□□□ 0.09
PCM1-202ENST00000327578 LMNTD2Q8IXW0 634 aa15.63■□□□□ 0.09
PCM1-202ENST00000327578 ANKRD50Q9ULJ7 1429 aa15.63■□□□□ 0.09
PCM1-202ENST00000327578 SH3BP5O60239 455 aa15.63■□□□□ 0.09
PCM1-202ENST00000327578 CCDC170Q8IYT3 715 aa15.63■□□□□ 0.09
PCM1-202ENST00000327578 CABP1Q9NZU7 370 aa15.63■□□□□ 0.09
PCM1-202ENST00000327578 TLDC2A0PJX2 215 aa15.63■□□□□ 0.09
PCM1-202ENST00000327578 KRT86O43790 486 aa15.63■□□□□ 0.09
PCM1-202ENST00000327578 LRRC27Q9C0I9 530 aa15.63■□□□□ 0.09
PCM1-202ENST00000327578 LZTFL1Q9NQ48 299 aa15.63■□□□□ 0.09
PCM1-202ENST00000327578 SETSIPP0DME0 302 aa15.63■□□□□ 0.09
PCM1-202ENST00000327578 ORC3Q9UBD5 711 aaPredicted RBP15.63■□□□□ 0.09
PCM1-202ENST00000327578 RFC1P35251 1148 aaPredicted RBP15.62■□□□□ 0.09
PCM1-202ENST00000327578 SF3B2Q13435 895 aaKnown RBP15.62■□□□□ 0.09
PCM1-202ENST00000327578 PPP1R7Q15435 360 aa15.62■□□□□ 0.09
PCM1-202ENST00000327578 GUCA1BQ9UMX6 200 aa15.62■□□□□ 0.09
PCM1-202ENST00000327578 LUC7L2Q9Y383 392 aaKnown RBP15.62■□□□□ 0.09
PCM1-202ENST00000327578 SPAG5Q96R06 1193 aa15.62■□□□□ 0.09
PCM1-202ENST00000327578 ZNF853P0CG23 659 aa15.62■□□□□ 0.09
PCM1-202ENST00000327578 KRT83P78385 493 aa15.62■□□□□ 0.09
PCM1-202ENST00000327578 WDR78Q5VTH9 848 aa15.62■□□□□ 0.09
PCM1-202ENST00000327578 CCDC110Q8TBZ0 833 aa15.62■□□□□ 0.09
PCM1-202ENST00000327578 IFT74Q96LB3 600 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms