RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 SLC3A2P08195 630 aaKnown RBP19.1■□□□□ 0.65
SFXN1-201ENST00000321442 PALD1Q9ULE6 856 aa19.1■□□□□ 0.65
SFXN1-201ENST00000321442 U2AF2P26368 475 aaKnown RBP eCLIP19.1■□□□□ 0.656e-7■■■□□ 14.8
SFXN1-201ENST00000321442 STX1AQ16623 288 aa19.1■□□□□ 0.65
SFXN1-201ENST00000321442 ZNF219Q9P2Y4 722 aaPredicted RBP19.1■□□□□ 0.65
SFXN1-201ENST00000321442 SBNO1A3KN83 1393 aa19.1■□□□□ 0.65
SFXN1-201ENST00000321442 KIF1BO60333 1816 aa19.09■□□□□ 0.65
SFXN1-201ENST00000321442 TOP1P11387 765 aaKnown RBP19.09■□□□□ 0.65
SFXN1-201ENST00000321442 RIOK3O14730 519 aaKnown RBP19.09■□□□□ 0.65
SFXN1-201ENST00000321442 PLEKHF1Q96S99 279 aa19.09■□□□□ 0.65
SFXN1-201ENST00000321442 H0YHG0 523 aa19.08■□□□□ 0.65
SFXN1-201ENST00000321442 CTAGE5O15320 804 aa19.08■□□□□ 0.65
SFXN1-201ENST00000321442 XBP1P17861 261 aa19.08■□□□□ 0.65
SFXN1-201ENST00000321442 LMBR1LQ6UX01 489 aa19.08■□□□□ 0.65
SFXN1-201ENST00000321442 ZNF496Q96IT1 587 aaPredicted RBP19.08■□□□□ 0.65
SFXN1-201ENST00000321442 PAXBP1Q9Y5B6 917 aa19.08■□□□□ 0.65
SFXN1-201ENST00000321442 PLXNC1O60486 1568 aa19.08■□□□□ 0.65
SFXN1-201ENST00000321442 PRAMEF22A3QJZ6 481 aa19.08■□□□□ 0.65
SFXN1-201ENST00000321442 GOLIM4O00461 696 aa19.08■□□□□ 0.65
SFXN1-201ENST00000321442 FAM193AP78312 1265 aa19.08■□□□□ 0.65
SFXN1-201ENST00000321442 DDB1Q16531 1140 aa19.08■□□□□ 0.65
SFXN1-201ENST00000321442 PIBF1Q8WXW3 757 aa19.08■□□□□ 0.65
SFXN1-201ENST00000321442 SMARCE1Q969G3 411 aa19.08■□□□□ 0.65
SFXN1-201ENST00000321442 CCDC47Q96A33 483 aaKnown RBP19.08■□□□□ 0.65
SFXN1-201ENST00000321442 ZFP91Q96JP5 570 aaPredicted RBP19.08■□□□□ 0.65
SFXN1-201ENST00000321442 IQGAP3Q86VI3 1631 aa19.08■□□□□ 0.64
SFXN1-201ENST00000321442 TOM1O60784 492 aa19.08■□□□□ 0.64
SFXN1-201ENST00000321442 TRIM22Q8IYM9 498 aa19.08■□□□□ 0.64
SFXN1-201ENST00000321442 PIK3R4Q99570 1358 aa19.08■□□□□ 0.64
SFXN1-201ENST00000321442 ARHGAP29Q52LW3 1261 aa19.08■□□□□ 0.64
SFXN1-201ENST00000321442 FAM182BQ5T319 152 aa19.08■□□□□ 0.64
SFXN1-201ENST00000321442 A2ML1A8K2U0 1454 aa19.07■□□□□ 0.64
SFXN1-201ENST00000321442 ZFYVE9O95405 1425 aa19.07■□□□□ 0.64
SFXN1-201ENST00000321442 BRD1O95696 1058 aa19.07■□□□□ 0.64
SFXN1-201ENST00000321442 CTNNA3Q9UI47 895 aa19.07■□□□□ 0.64
SFXN1-201ENST00000321442 IFIT1P09914 478 aaKnown RBP19.07■□□□□ 0.64
SFXN1-201ENST00000321442 NBPF7P0C2Y1 421 aaPredicted RBP19.07■□□□□ 0.64
SFXN1-201ENST00000321442 IMMTQ16891 758 aaKnown RBP19.07■□□□□ 0.64
SFXN1-201ENST00000321442 KRT222Q8N1A0 295 aa19.07■□□□□ 0.64
SFXN1-201ENST00000321442 AOPEPQ8N6M6 819 aa19.07■□□□□ 0.64
SFXN1-201ENST00000321442 NEMFO60524 1076 aa19.06■□□□□ 0.64
SFXN1-201ENST00000321442 ZNF790Q6PG37 636 aa19.06■□□□□ 0.64
SFXN1-201ENST00000321442 CCDC24Q8N4L8 307 aa19.06■□□□□ 0.64
SFXN1-201ENST00000321442 MYRIPQ8NFW9 859 aa19.06■□□□□ 0.64
SFXN1-201ENST00000321442 HELBQ8NG08 1087 aaPredicted RBP19.06■□□□□ 0.64
SFXN1-201ENST00000321442 DNAI1Q9UI46 699 aa19.06■□□□□ 0.64
SFXN1-201ENST00000321442 ERCC4Q92889 916 aaPredicted RBP19.06■□□□□ 0.64
SFXN1-201ENST00000321442 TET3O43151 1660 aa19.06■□□□□ 0.64
SFXN1-201ENST00000321442 RNF17Q9BXT8 1623 aaKnown RBP19.05■□□□□ 0.64
SFXN1-201ENST00000321442 NMIQ13287 307 aaPredicted RBP19.05■□□□□ 0.64
SFXN1-201ENST00000321442 IFIT5Q13325 482 aaKnown RBP19.05■□□□□ 0.64
SFXN1-201ENST00000321442 LDHAL6AQ6ZMR3 332 aa19.05■□□□□ 0.64
SFXN1-201ENST00000321442 MYOM2P54296 1465 aa19.05■□□□□ 0.64
SFXN1-201ENST00000321442 CFAP74Q9C0B2 1584 aa19.05■□□□□ 0.64
SFXN1-201ENST00000321442 LMOD1P29536 600 aaPredicted RBP19.05■□□□□ 0.64
SFXN1-201ENST00000321442 ATP6V1AP38606 617 aa19.05■□□□□ 0.64
SFXN1-201ENST00000321442 CHST3Q7LGC8 479 aa19.05■□□□□ 0.64
SFXN1-201ENST00000321442 BRMS1Q9HCU9 246 aa19.05■□□□□ 0.64
SFXN1-201ENST00000321442 PLEKHG1Q9ULL1 1385 aa19.05■□□□□ 0.64
SFXN1-201ENST00000321442 KDM5AP29375 1690 aaKnown RBP19.05■□□□□ 0.64
SFXN1-201ENST00000321442 GOLGA8BA8MQT2 603 aa19.05■□□□□ 0.64
SFXN1-201ENST00000321442 SLC4A8Q2Y0W8 1093 aa19.05■□□□□ 0.64
SFXN1-201ENST00000321442 CCDC144CPQ8IYA2 1237 aa19.05■□□□□ 0.64
SFXN1-201ENST00000321442 ORC3Q9UBD5 711 aaPredicted RBP19.05■□□□□ 0.64
SFXN1-201ENST00000321442 USP16Q9Y5T5 823 aa19.05■□□□□ 0.64
SFXN1-201ENST00000321442 CCDC69A6NI79 296 aa19.04■□□□□ 0.64
SFXN1-201ENST00000321442 GRM8O00222 908 aa19.04■□□□□ 0.64
SFXN1-201ENST00000321442 GSDMDP57764 484 aa19.04■□□□□ 0.64
SFXN1-201ENST00000321442 KIF4BQ2VIQ3 1234 aa19.04■□□□□ 0.64
SFXN1-201ENST00000321442 KSR2Q6VAB6 950 aa19.04■□□□□ 0.64
SFXN1-201ENST00000321442 CEP152O94986 1710 aa19.04■□□□□ 0.64
SFXN1-201ENST00000321442 ABCA9Q8IUA7 1624 aa19.04■□□□□ 0.64
SFXN1-201ENST00000321442 SOS1Q07889 1333 aaPredicted RBP19.04■□□□□ 0.64
SFXN1-201ENST00000321442 E9PCH4 1651 aa19.04■□□□□ 0.64
SFXN1-201ENST00000321442 ERLIN1O75477 346 aa19.04■□□□□ 0.64
SFXN1-201ENST00000321442 NDUFB9Q9Y6M9 179 aa19.04■□□□□ 0.64
SFXN1-201ENST00000321442 ZNF500O60304 480 aaPredicted RBP19.04■□□□□ 0.64
SFXN1-201ENST00000321442 DHX8Q14562 1220 aaKnown RBP19.04■□□□□ 0.64
SFXN1-201ENST00000321442 NOL10Q9BSC4 688 aaKnown RBP19.04■□□□□ 0.64
SFXN1-201ENST00000321442 GNG11P61952 73 aa19.03■□□□□ 0.64
SFXN1-201ENST00000321442 CREB3L3Q68CJ9 461 aa19.03■□□□□ 0.64
SFXN1-201ENST00000321442 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.03■□□□□ 0.642e-6■□□□□ 11.2
SFXN1-201ENST00000321442 EPB41L2O43491 1005 aaKnown RBP19.03■□□□□ 0.64
SFXN1-201ENST00000321442 Q6ZUG5 572 aa19.03■□□□□ 0.64
SFXN1-201ENST00000321442 SNX14Q9Y5W7 946 aa19.03■□□□□ 0.64
SFXN1-201ENST00000321442 ZSCAN12O43309 604 aa19.03■□□□□ 0.64
SFXN1-201ENST00000321442 KCNQ4P56696 695 aa19.02■□□□□ 0.64
SFXN1-201ENST00000321442 BMS1Q14692 1282 aaKnown RBP19.02■□□□□ 0.64
SFXN1-201ENST00000321442 TAF3Q5VWG9 929 aa19.02■□□□□ 0.64
SFXN1-201ENST00000321442 SIRT1Q96EB6 747 aa19.02■□□□□ 0.64
SFXN1-201ENST00000321442 FAM89AQ96GI7 184 aa19.02■□□□□ 0.64
SFXN1-201ENST00000321442 TRIM34Q9BYJ4 488 aa19.02■□□□□ 0.64
SFXN1-201ENST00000321442 CWC25Q9NXE8 425 aaPredicted RBP19.02■□□□□ 0.64
SFXN1-201ENST00000321442 NSFL1CQ9UNZ2 370 aaKnown RBP19.02■□□□□ 0.64
SFXN1-201ENST00000321442 SIRT2Q8IXJ6 389 aa19.02■□□□□ 0.64
SFXN1-201ENST00000321442 SMAP1Q8IYB5 467 aaPredicted RBP19.02■□□□□ 0.64
SFXN1-201ENST00000321442 CNNM3Q8NE01 707 aa19.02■□□□□ 0.64
SFXN1-201ENST00000321442 CALCOCO1Q9P1Z2 691 aa19.02■□□□□ 0.64
SFXN1-201ENST00000321442 EIF3JO75822 258 aaKnown RBP19.01■□□□□ 0.63
SFXN1-201ENST00000321442 FAM98CQ17RN3 349 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms