RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 IFIT5Q13325 482 aaKnown RBP26.39■■□□□ 1.81
YBX1-201ENST00000321358 DDX46Q7L014 1031 aaKnown RBP26.39■■□□□ 1.81
YBX1-201ENST00000321358 ANKRD44Q8N8A2 993 aa26.39■■□□□ 1.81
YBX1-201ENST00000321358 CD2APQ9Y5K6 639 aa26.39■■□□□ 1.81
YBX1-201ENST00000321358 ERICH6BQ5W0A0 696 aa26.38■■□□□ 1.81
YBX1-201ENST00000321358 C2CD5Q86YS7 1000 aa26.38■■□□□ 1.81
YBX1-201ENST00000321358 SRGAP3O43295 1099 aa26.37■■□□□ 1.81
YBX1-201ENST00000321358 HMMRO75330 724 aa26.37■■□□□ 1.81
YBX1-201ENST00000321358 ATP8B2P98198 1209 aa26.37■■□□□ 1.81
YBX1-201ENST00000321358 CRY2Q49AN0 593 aa26.37■■□□□ 1.81
YBX1-201ENST00000321358 CEP85Q6P2H3 762 aa26.37■■□□□ 1.81
YBX1-201ENST00000321358 C3orf67Q6ZVT6 689 aa26.37■■□□□ 1.81
YBX1-201ENST00000321358 RBM17Q96I25 401 aaKnown RBP26.37■■□□□ 1.81
YBX1-201ENST00000321358 C10orf71Q711Q0 1435 aa26.37■■□□□ 1.81
YBX1-201ENST00000321358 ANKRD18BA2A2Z9 1011 aa26.36■■□□□ 1.81
YBX1-201ENST00000321358 TGFB2P61812 414 aa26.36■■□□□ 1.81
YBX1-201ENST00000321358 MTX1Q13505 466 aa26.36■■□□□ 1.81
YBX1-201ENST00000321358 TAF7LQ5H9L4 462 aa26.36■■□□□ 1.81
YBX1-201ENST00000321358 NRXN2Q9P2S2 1712 aa26.36■■□□□ 1.81
YBX1-201ENST00000321358 NPR1P16066 1061 aa26.35■■□□□ 1.81
YBX1-201ENST00000321358 FAM161AQ3B820 660 aa26.35■■□□□ 1.81
YBX1-201ENST00000321358 GREM2Q9H772 168 aa26.35■■□□□ 1.81
YBX1-201ENST00000321358 SRGNP10124 158 aa26.34■■□□□ 1.81
YBX1-201ENST00000321358 ITGA6P23229 1130 aa26.34■■□□□ 1.81
YBX1-201ENST00000321358 MASTLQ96GX5 879 aa26.34■■□□□ 1.81
YBX1-201ENST00000321358 CDC5LQ99459 802 aaKnown RBP26.34■■□□□ 1.81
YBX1-201ENST00000321358 ZNF622Q969S3 477 aaKnown RBP eCLIP26.34■■□□□ 1.813e-25■□□□□ 9.5
YBX1-201ENST00000321358 RTL9Q8NET4 1388 aa26.33■■□□□ 1.81
YBX1-201ENST00000321358 PCDHB15Q9Y5E8 787 aa26.33■■□□□ 1.81
YBX1-201ENST00000321358 ALDH1B1P30837 517 aa26.32■■□□□ 1.8
YBX1-201ENST00000321358 HOXA10P31260 410 aaPredicted RBP26.32■■□□□ 1.8
YBX1-201ENST00000321358 PNMA6EA0A0J9YXQ4 647 aa26.31■■□□□ 1.8
YBX1-201ENST00000321358 IGHMBP2P38935 993 aaKnown RBP26.31■■□□□ 1.8
YBX1-201ENST00000321358 STYK1Q6J9G0 422 aa26.31■■□□□ 1.8
YBX1-201ENST00000321358 CHRNA5P30532 468 aa26.3■■□□□ 1.8
YBX1-201ENST00000321358 ANKRD18AQ8IVF6 992 aa26.3■■□□□ 1.8
YBX1-201ENST00000321358 CNKSR1Q969H4 720 aa26.3■■□□□ 1.8
YBX1-201ENST00000321358 CRAMP1Q96RY5 1269 aa26.3■■□□□ 1.8
YBX1-201ENST00000321358 SEC31BQ9NQW1 1179 aa26.3■■□□□ 1.8
YBX1-201ENST00000321358 A0A0G2JLW4 131 aa26.29■■□□□ 1.8
YBX1-201ENST00000321358 SSH3Q8TE77 659 aa26.29■■□□□ 1.8
YBX1-201ENST00000321358 MPHOSPH8Q99549 860 aa26.29■■□□□ 1.8
YBX1-201ENST00000321358 RWDD1Q9H446 243 aaPredicted RBP26.29■■□□□ 1.8
YBX1-201ENST00000321358 DPEP1P16444 411 aa26.29■■□□□ 1.8
YBX1-201ENST00000321358 RPS8P62241 208 aaKnown RBP26.29■■□□□ 1.8
YBX1-201ENST00000321358 GRAPQ13588 217 aa26.29■■□□□ 1.8
YBX1-201ENST00000321358 POLA2Q14181 598 aa26.29■■□□□ 1.8
YBX1-201ENST00000321358 GRAPLQ8TC17 118 aaPredicted RBP26.29■■□□□ 1.8
YBX1-201ENST00000321358 BBOX1O75936 387 aa26.28■■□□□ 1.8
YBX1-201ENST00000321358 FHDC1Q9C0D6 1143 aaPredicted RBP26.28■■□□□ 1.8
YBX1-201ENST00000321358 SIRT2Q8IXJ6 389 aa26.27■■□□□ 1.8
YBX1-201ENST00000321358 TMX4Q9H1E5 349 aaPredicted RBP26.27■■□□□ 1.8
YBX1-201ENST00000321358 DDX60Q8IY21 1712 aaKnown RBP26.26■■□□□ 1.79
YBX1-201ENST00000321358 LDHAL6AQ6ZMR3 332 aa26.26■■□□□ 1.79
YBX1-201ENST00000321358 PIM2Q9P1W9 311 aa26.26■■□□□ 1.79
YBX1-201ENST00000321358 CELF1Q92879 486 aaKnown RBP26.25■■□□□ 1.79
YBX1-201ENST00000321358 COPRSQ9NQ92 184 aa26.25■■□□□ 1.79
YBX1-201ENST00000321358 CNNM1Q9NRU3 951 aa26.25■■□□□ 1.79
YBX1-201ENST00000321358 LAMB2P55268 1798 aa26.24■■□□□ 1.79
YBX1-201ENST00000321358 SURF6O75683 361 aaKnown RBP26.24■■□□□ 1.79
YBX1-201ENST00000321358 RFX5P48382 616 aaPredicted RBP26.24■■□□□ 1.79
YBX1-201ENST00000321358 PTPN12Q05209 780 aaKnown RBP26.24■■□□□ 1.79
YBX1-201ENST00000321358 G3BP1Q13283 466 aaKnown RBP eCLIP26.24■■□□□ 1.793e-9■□□□□ 10.3
YBX1-201ENST00000321358 HDAC1Q13547 482 aaPredicted RBP26.24■■□□□ 1.79
YBX1-201ENST00000321358 TMC4Q7Z404 712 aa26.24■■□□□ 1.79
YBX1-201ENST00000321358 TTLL6Q8N841 843 aa26.24■■□□□ 1.79
YBX1-201ENST00000321358 ZNF594Q96JF6 807 aaPredicted RBP26.24■■□□□ 1.79
YBX1-201ENST00000321358 FBXO3Q9UK99 471 aa26.24■■□□□ 1.79
YBX1-201ENST00000321358 OS9Q13438 667 aaPredicted RBP26.24■■□□□ 1.79
YBX1-201ENST00000321358 HSP90AB4PQ58FF6 505 aa26.24■■□□□ 1.79
YBX1-201ENST00000321358 KLHDC4Q8TBB5 520 aa26.24■■□□□ 1.79
YBX1-201ENST00000321358 BSDC1Q9NW68 430 aaPredicted RBP26.24■■□□□ 1.79
YBX1-201ENST00000321358 TNRC6CQ9HCJ0 1690 aaKnown RBP26.23■■□□□ 1.79
YBX1-201ENST00000321358 CCDC136Q96JN2 1154 aa26.23■■□□□ 1.79
YBX1-201ENST00000321358 SIL1Q9H173 461 aa26.23■■□□□ 1.79
YBX1-201ENST00000321358 PA2G4Q9UQ80 394 aaKnown RBP26.23■■□□□ 1.79
YBX1-201ENST00000321358 SYT17Q9BSW7 474 aa26.22■■□□□ 1.79
YBX1-201ENST00000321358 PPP4R2Q9NY27 417 aa26.22■■□□□ 1.79
YBX1-201ENST00000321358 PPEF1O14829 653 aaPredicted RBP26.21■■□□□ 1.79
YBX1-201ENST00000321358 KCNA3P22001 575 aa26.21■■□□□ 1.79
YBX1-201ENST00000321358 ANKRD31Q8N7Z5 1873 aa26.2■■□□□ 1.79
YBX1-201ENST00000321358 EYA2O00167 538 aa26.2■■□□□ 1.79
YBX1-201ENST00000321358 DALRD3Q5D0E6 543 aaKnown RBP26.2■■□□□ 1.79
YBX1-201ENST00000321358 PRPF40BQ6NWY9 871 aaKnown RBP26.2■■□□□ 1.79
YBX1-201ENST00000321358 NLGN2Q8NFZ4 835 aa26.2■■□□□ 1.79
YBX1-201ENST00000321358 NOP58Q9Y2X3 529 aaKnown RBP26.2■■□□□ 1.79
YBX1-201ENST00000321358 CIAO1O76071 339 aa26.19■■□□□ 1.78
YBX1-201ENST00000321358 MYH3P11055 1940 aa26.19■■□□□ 1.78
YBX1-201ENST00000321358 IL15P40933 162 aaPredicted RBP26.19■■□□□ 1.78
YBX1-201ENST00000321358 ERC1Q8IUD2 1116 aa26.19■■□□□ 1.78
YBX1-201ENST00000321358 GCC1Q96CN9 775 aa26.18■■□□□ 1.78
YBX1-201ENST00000321358 DCTPP1Q9H773 170 aa26.18■■□□□ 1.78
YBX1-201ENST00000321358 EXOC6BQ9Y2D4 811 aa26.18■■□□□ 1.78
YBX1-201ENST00000321358 RAB11FIP3O75154 756 aa26.17■■□□□ 1.78
YBX1-201ENST00000321358 LRRC24Q50LG9 513 aa26.17■■□□□ 1.78
YBX1-201ENST00000321358 SP8Q8IXZ3 490 aa26.17■■□□□ 1.78
YBX1-201ENST00000321358 PUS3Q9BZE2 481 aaKnown RBP26.17■■□□□ 1.78
YBX1-201ENST00000321358 ZBTB47Q9UFB7 747 aaPredicted RBP26.17■■□□□ 1.78
YBX1-201ENST00000321358 ATP6V0A2Q9Y487 856 aa26.17■■□□□ 1.78
YBX1-201ENST00000321358 MROH5Q6ZUA9 1318 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms