RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 DBNLQ9UJU6 430 aaKnown RBP21.71■■□□□ 1.07
RAB39A-201ENST00000320578 SUSD4Q5VX71 490 aa21.7■■□□□ 1.06
RAB39A-201ENST00000320578 TLR7Q9NYK1 1049 aaKnown RBP21.7■■□□□ 1.06
RAB39A-201ENST00000320578 CCNL1Q9UK58 526 aaPredicted RBP21.7■■□□□ 1.06
RAB39A-201ENST00000320578 SBF2Q86WG5 1849 aa21.7■■□□□ 1.06
RAB39A-201ENST00000320578 BCORQ6W2J9 1755 aa21.69■■□□□ 1.06
RAB39A-201ENST00000320578 LY75O60449 1722 aa21.69■■□□□ 1.06
RAB39A-201ENST00000320578 FAM196AQ6ZSG2 479 aa21.69■■□□□ 1.06
RAB39A-201ENST00000320578 IL17RAQ96F46 866 aa21.69■■□□□ 1.06
RAB39A-201ENST00000320578 ANKRD18BA2A2Z9 1011 aa21.69■■□□□ 1.06
RAB39A-201ENST00000320578 RABEP1Q15276 862 aa21.69■■□□□ 1.06
RAB39A-201ENST00000320578 RUFY2Q8WXA3 655 aa21.69■■□□□ 1.06
RAB39A-201ENST00000320578 CEP126Q9P2H0 1117 aa21.69■■□□□ 1.06
RAB39A-201ENST00000320578 AKAP2Q9Y2D5 859 aa21.69■■□□□ 1.06
RAB39A-201ENST00000320578 SGSM2O43147 1006 aa21.68■■□□□ 1.06
RAB39A-201ENST00000320578 HMGB2P26583 209 aaKnown RBP21.68■■□□□ 1.06
RAB39A-201ENST00000320578 SLC4A3P48751 1232 aa21.68■■□□□ 1.06
RAB39A-201ENST00000320578 LRRC24Q50LG9 513 aa21.68■■□□□ 1.06
RAB39A-201ENST00000320578 SYNE4Q8N205 404 aa21.68■■□□□ 1.06
RAB39A-201ENST00000320578 NTSR2O95665 410 aa21.67■■□□□ 1.06
RAB39A-201ENST00000320578 ZNF772Q68DY9 489 aaPredicted RBP21.67■■□□□ 1.06
RAB39A-201ENST00000320578 ZNF594Q96JF6 807 aaPredicted RBP21.67■■□□□ 1.06
RAB39A-201ENST00000320578 NARFQ9UHQ1 456 aa21.67■■□□□ 1.06
RAB39A-201ENST00000320578 NIP7Q9Y221 180 aaKnown RBP eCLIP21.67■■□□□ 1.06
RAB39A-201ENST00000320578 RFX7Q2KHR2 1363 aa21.67■■□□□ 1.06
RAB39A-201ENST00000320578 RTL9Q8NET4 1388 aa21.67■■□□□ 1.06
RAB39A-201ENST00000320578 ZNF609O15014 1411 aa21.67■■□□□ 1.06
RAB39A-201ENST00000320578 MAP4K4O95819 1239 aaPredicted RBP21.66■■□□□ 1.06
RAB39A-201ENST00000320578 ITGA6P23229 1130 aa21.66■■□□□ 1.06
RAB39A-201ENST00000320578 ANAPC15P60006 121 aa21.66■■□□□ 1.06
RAB39A-201ENST00000320578 TAF7LQ5H9L4 462 aa21.66■■□□□ 1.06
RAB39A-201ENST00000320578 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.66■■□□□ 1.06
RAB39A-201ENST00000320578 MCCP23508 829 aa21.66■■□□□ 1.06
RAB39A-201ENST00000320578 FAM182BQ5T319 152 aa21.66■■□□□ 1.06
RAB39A-201ENST00000320578 HSCBQ8IWL3 235 aa21.66■■□□□ 1.06
RAB39A-201ENST00000320578 DBNDD2Q9BQY9 259 aa21.66■■□□□ 1.06
RAB39A-201ENST00000320578 GREM2Q9H772 168 aa21.66■■□□□ 1.06
RAB39A-201ENST00000320578 RIPOR2Q9Y4F9 1068 aa21.66■■□□□ 1.06
RAB39A-201ENST00000320578 AK9Q5TCS8 1911 aa21.65■■□□□ 1.06
RAB39A-201ENST00000320578 KRT27Q7Z3Y8 459 aa21.65■■□□□ 1.06
RAB39A-201ENST00000320578 PUS3Q9BZE2 481 aaKnown RBP21.65■■□□□ 1.06
RAB39A-201ENST00000320578 SNRKQ9NRH2 765 aa21.65■■□□□ 1.06
RAB39A-201ENST00000320578 MYH3P11055 1940 aa21.65■■□□□ 1.06
RAB39A-201ENST00000320578 HAUS7Q99871 368 aa21.64■■□□□ 1.06
RAB39A-201ENST00000320578 BOLA2Q9H3K6 86 aa21.64■■□□□ 1.06
RAB39A-201ENST00000320578 DIAPH3Q9NSV4 1193 aa21.64■■□□□ 1.06
RAB39A-201ENST00000320578 RAD50Q92878 1312 aa21.64■■□□□ 1.05
RAB39A-201ENST00000320578 RBM6P78332 1123 aaKnown RBP21.64■■□□□ 1.05
RAB39A-201ENST00000320578 RTCBQ9Y3I0 505 aaKnown RBP21.64■■□□□ 1.05
RAB39A-201ENST00000320578 SCN7AQ01118 1682 aa21.63■■□□□ 1.05
RAB39A-201ENST00000320578 ANP32EQ9BTT0 268 aa21.63■■□□□ 1.05
RAB39A-201ENST00000320578 ANO2Q9NQ90 1003 aa21.63■■□□□ 1.05
RAB39A-201ENST00000320578 A0A1B0GUL7 405 aa21.62■■□□□ 1.05
RAB39A-201ENST00000320578 SLC27A3Q5K4L6 730 aa21.62■■□□□ 1.05
RAB39A-201ENST00000320578 LDHAL6AQ6ZMR3 332 aa21.62■■□□□ 1.05
RAB39A-201ENST00000320578 LRP5O75197 1615 aa21.62■■□□□ 1.05
RAB39A-201ENST00000320578 ABCC12Q96J65 1359 aa21.61■■□□□ 1.05
RAB39A-201ENST00000320578 LAMB2P55268 1798 aa21.61■■□□□ 1.05
RAB39A-201ENST00000320578 GNPATO15228 680 aa21.61■■□□□ 1.05
RAB39A-201ENST00000320578 ADRA2BP18089 450 aa21.61■■□□□ 1.05
RAB39A-201ENST00000320578 KCNQ4P56696 695 aa21.61■■□□□ 1.05
RAB39A-201ENST00000320578 CCDC152Q4G0S7 254 aa21.61■■□□□ 1.05
RAB39A-201ENST00000320578 SLC10A5Q5PT55 438 aa21.61■■□□□ 1.05
RAB39A-201ENST00000320578 NEUROD6Q96NK8 337 aa21.61■■□□□ 1.05
RAB39A-201ENST00000320578 BCL2L12Q9HB09 334 aa21.61■■□□□ 1.05
RAB39A-201ENST00000320578 TAF1LQ8IZX4 1826 aa21.6■■□□□ 1.05
RAB39A-201ENST00000320578 TIMM10P62072 90 aa21.6■■□□□ 1.05
RAB39A-201ENST00000320578 KIAA1211Q6ZU35 1233 aa21.6■■□□□ 1.05
RAB39A-201ENST00000320578 LSG1Q9H089 658 aaKnown RBP21.6■■□□□ 1.05
RAB39A-201ENST00000320578 RIC1Q4ADV7 1423 aa21.6■■□□□ 1.05
RAB39A-201ENST00000320578 ZPR1O75312 459 aa21.59■■□□□ 1.05
RAB39A-201ENST00000320578 NYXQ9GZU5 481 aa21.59■■□□□ 1.05
RAB39A-201ENST00000320578 MROH5Q6ZUA9 1318 aa21.59■■□□□ 1.05
RAB39A-201ENST00000320578 HCLS1P14317 486 aaPredicted RBP21.59■■□□□ 1.05
RAB39A-201ENST00000320578 HSPA4P34932 840 aa21.59■■□□□ 1.05
RAB39A-201ENST00000320578 CWC27Q6UX04 472 aaKnown RBP21.59■■□□□ 1.05
RAB39A-201ENST00000320578 VGLL2Q8N8G2 317 aa21.59■■□□□ 1.05
RAB39A-201ENST00000320578 CCDC85AQ96PX6 553 aaPredicted RBP21.59■■□□□ 1.05
RAB39A-201ENST00000320578 FSD1Q9BTV5 496 aa21.59■■□□□ 1.05
RAB39A-201ENST00000320578 IL25Q9H293 177 aa21.59■■□□□ 1.05
RAB39A-201ENST00000320578 C4BP0C0L5 1744 aa21.58■■□□□ 1.05
RAB39A-201ENST00000320578 SF3B3Q15393 1217 aaKnown RBP21.58■■□□□ 1.05
RAB39A-201ENST00000320578 METTL24Q5JXM2 366 aa21.58■■□□□ 1.05
RAB39A-201ENST00000320578 CNNM1Q9NRU3 951 aa21.58■■□□□ 1.05
RAB39A-201ENST00000320578 CCDC158Q5M9N0 1113 aa21.57■■□□□ 1.04
RAB39A-201ENST00000320578 USPL1Q5W0Q7 1092 aa21.57■■□□□ 1.04
RAB39A-201ENST00000320578 ZNF512BQ96KM6 892 aaPredicted RBP21.57■■□□□ 1.04
RAB39A-201ENST00000320578 DDX60Q8IY21 1712 aaKnown RBP21.57■■□□□ 1.04
RAB39A-201ENST00000320578 ARHGEF1Q92888 912 aaKnown RBP21.57■■□□□ 1.04
RAB39A-201ENST00000320578 ANTXR1Q9H6X2 564 aa21.57■■□□□ 1.04
RAB39A-201ENST00000320578 K7ELQ4 463 aaPredicted RBP21.56■■□□□ 1.04
RAB39A-201ENST00000320578 ST18O60284 1047 aa21.56■■□□□ 1.04
RAB39A-201ENST00000320578 PDE8BO95263 885 aa21.56■■□□□ 1.04
RAB39A-201ENST00000320578 ATP2B3Q16720 1220 aa21.56■■□□□ 1.04
RAB39A-201ENST00000320578 TRAPPC3LQ5T215 181 aa21.56■■□□□ 1.04
RAB39A-201ENST00000320578 KBTBD3Q8NAB2 608 aa21.56■■□□□ 1.04
RAB39A-201ENST00000320578 XAGE2Q96GT9 111 aa21.56■■□□□ 1.04
RAB39A-201ENST00000320578 SPEF2Q9C093 1822 aa21.56■■□□□ 1.04
RAB39A-201ENST00000320578 TBC1D9BQ66K14 1250 aa21.55■■□□□ 1.04
RAB39A-201ENST00000320578 SETDB2Q96T68 719 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms