RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 CDHR2Q9BYE9 1310 aa22.02■■□□□ 1.11
SHISA3-201ENST00000319234 EYA2O00167 538 aa22.01■■□□□ 1.11
SHISA3-201ENST00000319234 INTS5Q6P9B9 1019 aaKnown RBP22.01■■□□□ 1.11
SHISA3-201ENST00000319234 CWC27Q6UX04 472 aaKnown RBP22.01■■□□□ 1.11
SHISA3-201ENST00000319234 GAS2L3Q86XJ1 694 aa22.01■■□□□ 1.11
SHISA3-201ENST00000319234 BOLA2Q9H3K6 86 aa22.01■■□□□ 1.11
SHISA3-201ENST00000319234 GPR108Q9NPR9 543 aa22.01■■□□□ 1.11
SHISA3-201ENST00000319234 CCDC87Q9NVE4 849 aa22.01■■□□□ 1.11
SHISA3-201ENST00000319234 HIP1O00291 1037 aa22.01■■□□□ 1.11
SHISA3-201ENST00000319234 CIAO1O76071 339 aa22.01■■□□□ 1.11
SHISA3-201ENST00000319234 ATP5JP18859 108 aa22.01■■□□□ 1.11
SHISA3-201ENST00000319234 EIF5P55010 431 aaKnown RBP22.01■■□□□ 1.11
SHISA3-201ENST00000319234 CSF1RP07333 972 aa21.99■■□□□ 1.11
SHISA3-201ENST00000319234 GPTP24298 496 aa21.99■■□□□ 1.11
SHISA3-201ENST00000319234 HSPA4P34932 840 aa21.99■■□□□ 1.11
SHISA3-201ENST00000319234 KIAA1211Q6ZU35 1233 aa21.99■■□□□ 1.11
SHISA3-201ENST00000319234 LSG1Q9H089 658 aaKnown RBP21.99■■□□□ 1.11
SHISA3-201ENST00000319234 TBC1D2BQ9UPU7 963 aa21.99■■□□□ 1.11
SHISA3-201ENST00000319234 PALLDQ8WX93 1383 aa21.99■■□□□ 1.11
SHISA3-201ENST00000319234 RAD50Q92878 1312 aa21.99■■□□□ 1.11
SHISA3-201ENST00000319234 CCDC57Q2TAC2 916 aa21.99■■□□□ 1.11
SHISA3-201ENST00000319234 MCTP1Q6DN14 999 aa21.99■■□□□ 1.11
SHISA3-201ENST00000319234 ZNF594Q96JF6 807 aaPredicted RBP21.99■■□□□ 1.11
SHISA3-201ENST00000319234 FBXO3Q9UK99 471 aa21.99■■□□□ 1.11
SHISA3-201ENST00000319234 PALD1Q9ULE6 856 aa21.99■■□□□ 1.11
SHISA3-201ENST00000319234 CLCN1P35523 988 aa21.98■■□□□ 1.11
SHISA3-201ENST00000319234 CRKLP46109 303 aaKnown RBP21.98■■□□□ 1.11
SHISA3-201ENST00000319234 NEK4P51957 841 aa21.98■■□□□ 1.11
SHISA3-201ENST00000319234 ZNF445P59923 1031 aa21.98■■□□□ 1.11
SHISA3-201ENST00000319234 ITPK1Q13572 414 aa21.98■■□□□ 1.11
SHISA3-201ENST00000319234 ILDR1Q86SU0 546 aaPredicted RBP21.98■■□□□ 1.11
SHISA3-201ENST00000319234 DBNDD2Q9BQY9 259 aa21.98■■□□□ 1.11
SHISA3-201ENST00000319234 LMBRD1Q9NUN5 540 aa21.98■■□□□ 1.11
SHISA3-201ENST00000319234 KCNQ2O43526 872 aa21.98■■□□□ 1.11
SHISA3-201ENST00000319234 LRRC24Q50LG9 513 aa21.98■■□□□ 1.11
SHISA3-201ENST00000319234 ZGPATQ8N5A5 531 aaKnown RBP21.98■■□□□ 1.11
SHISA3-201ENST00000319234 ANO8Q9HCE9 1232 aaPredicted RBP21.98■■□□□ 1.11
SHISA3-201ENST00000319234 CICQ96RK0 1608 aaPredicted RBP21.97■■□□□ 1.11
SHISA3-201ENST00000319234 CUL4AQ13619 759 aa21.97■■□□□ 1.11
SHISA3-201ENST00000319234 ZNF34Q8IZ26 560 aa21.97■■□□□ 1.11
SHISA3-201ENST00000319234 INTS4Q96HW7 963 aaKnown RBP21.97■■□□□ 1.11
SHISA3-201ENST00000319234 TMX3Q96JJ7 454 aa21.97■■□□□ 1.11
SHISA3-201ENST00000319234 USP21Q9UK80 565 aa21.97■■□□□ 1.11
SHISA3-201ENST00000319234 ANKRD36CQ5JPF3 1778 aa21.97■■□□□ 1.11
SHISA3-201ENST00000319234 FSD1Q9BTV5 496 aa21.96■■□□□ 1.11
SHISA3-201ENST00000319234 PKP1Q13835 747 aa21.95■■□□□ 1.1
SHISA3-201ENST00000319234 CERKQ8TCT0 537 aa21.95■■□□□ 1.1
SHISA3-201ENST00000319234 TRMT112Q9UI30 125 aaKnown RBP21.95■■□□□ 1.1
SHISA3-201ENST00000319234 RREB1Q92766 1687 aa21.95■■□□□ 1.1
SHISA3-201ENST00000319234 IFIT5Q13325 482 aaKnown RBP21.94■■□□□ 1.1
SHISA3-201ENST00000319234 SYNE4Q8N205 404 aa21.94■■□□□ 1.1
SHISA3-201ENST00000319234 PUS3Q9BZE2 481 aaKnown RBP21.94■■□□□ 1.1
SHISA3-201ENST00000319234 ZDHHC9Q9Y397 364 aa21.94■■□□□ 1.1
SHISA3-201ENST00000319234 NUP98P52948 1817 aa21.94■■□□□ 1.1
SHISA3-201ENST00000319234 NMIQ13287 307 aaPredicted RBP21.94■■□□□ 1.1
SHISA3-201ENST00000319234 NEUROD6Q96NK8 337 aa21.94■■□□□ 1.1
SHISA3-201ENST00000319234 HAUS7Q99871 368 aa21.94■■□□□ 1.1
SHISA3-201ENST00000319234 SNRKQ9NRH2 765 aa21.94■■□□□ 1.1
SHISA3-201ENST00000319234 IRS4O14654 1257 aaPredicted RBP21.93■■□□□ 1.1
SHISA3-201ENST00000319234 CCDC173Q0VFZ6 552 aa21.93■■□□□ 1.1
SHISA3-201ENST00000319234 CEP126Q9P2H0 1117 aa21.93■■□□□ 1.1
SHISA3-201ENST00000319234 TAF7LQ5H9L4 462 aa21.92■■□□□ 1.1
SHISA3-201ENST00000319234 TTLL11Q8NHH1 800 aa21.92■■□□□ 1.1
SHISA3-201ENST00000319234 TRIM44Q96DX7 344 aaPredicted RBP21.92■■□□□ 1.1
SHISA3-201ENST00000319234 UBN2Q6ZU65 1347 aa21.92■■□□□ 1.1
SHISA3-201ENST00000319234 ZNF609O15014 1411 aa21.92■■□□□ 1.1
SHISA3-201ENST00000319234 CTSWP56202 376 aa21.92■■□□□ 1.1
SHISA3-201ENST00000319234 TIMM10P62072 90 aa21.92■■□□□ 1.1
SHISA3-201ENST00000319234 FAM227BQ96M60 508 aa21.92■■□□□ 1.1
SHISA3-201ENST00000319234 PDE8AO60658 829 aa21.91■■□□□ 1.1
SHISA3-201ENST00000319234 CAMTA2O94983 1202 aa21.91■■□□□ 1.1
SHISA3-201ENST00000319234 NASPP49321 788 aaPredicted RBP21.91■■□□□ 1.1
SHISA3-201ENST00000319234 ANP32BQ92688 251 aaKnown RBP21.91■■□□□ 1.1
SHISA3-201ENST00000319234 CCDC85AQ96PX6 553 aaPredicted RBP21.91■■□□□ 1.1
SHISA3-201ENST00000319234 PPP1R9BQ96SB3 815 aa21.91■■□□□ 1.1
SHISA3-201ENST00000319234 RFX7Q2KHR2 1363 aa21.91■■□□□ 1.1
SHISA3-201ENST00000319234 PTH1RQ03431 593 aa21.9■■□□□ 1.1
SHISA3-201ENST00000319234 AKAP2Q9Y2D5 859 aa21.9■■□□□ 1.1
SHISA3-201ENST00000319234 SNX14Q9Y5W7 946 aa21.9■■□□□ 1.1
SHISA3-201ENST00000319234 EDC3Q96F86 508 aaKnown RBP21.9■■□□□ 1.1
SHISA3-201ENST00000319234 AK7Q96M32 723 aa21.9■■□□□ 1.1
SHISA3-201ENST00000319234 ZNF831Q5JPB2 1677 aa21.9■■□□□ 1.1
SHISA3-201ENST00000319234 CCDC171Q6TFL3 1326 aa21.89■■□□□ 1.1
SHISA3-201ENST00000319234 A0A1B0GUL7 405 aa21.89■■□□□ 1.09
SHISA3-201ENST00000319234 ANKRD18BA2A2Z9 1011 aa21.89■■□□□ 1.09
SHISA3-201ENST00000319234 ESPNB1AK53 854 aa21.89■■□□□ 1.09
SHISA3-201ENST00000319234 BRD1O95696 1058 aa21.89■■□□□ 1.09
SHISA3-201ENST00000319234 ZSCAN23Q3MJ62 389 aa21.89■■□□□ 1.09
SHISA3-201ENST00000319234 DNAJC2Q99543 621 aaKnown RBP21.89■■□□□ 1.09
SHISA3-201ENST00000319234 GREM2Q9H772 168 aa21.89■■□□□ 1.09
SHISA3-201ENST00000319234 A0A0D9SFI3 127 aa21.88■■□□□ 1.09
SHISA3-201ENST00000319234 ITGA6P23229 1130 aa21.88■■□□□ 1.09
SHISA3-201ENST00000319234 CAVIN1Q6NZI2 390 aaKnown RBP21.88■■□□□ 1.09
SHISA3-201ENST00000319234 KCNB2Q92953 911 aa21.88■■□□□ 1.09
SHISA3-201ENST00000319234 PRPF40AO75400 957 aaKnown RBP21.88■■□□□ 1.09
SHISA3-201ENST00000319234 PARP10Q53GL7 1025 aa21.88■■□□□ 1.09
SHISA3-201ENST00000319234 MBD3O95983 291 aa21.87■■□□□ 1.09
SHISA3-201ENST00000319234 MEX3CQ5U5Q3 659 aaKnown RBP21.87■■□□□ 1.09
SHISA3-201ENST00000319234 SUSD4Q5VX71 490 aa21.87■■□□□ 1.09
SHISA3-201ENST00000319234 TICAM2Q86XR7 235 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms