RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 C2CD5Q86YS7 1000 aa19.23■□□□□ 0.67
HNF4A-202ENST00000316673 RPGRQ92834 1020 aaKnown RBP19.23■□□□□ 0.67
HNF4A-202ENST00000316673 DDX60Q8IY21 1712 aaKnown RBP19.23■□□□□ 0.67
HNF4A-202ENST00000316673 SRGNP10124 158 aa19.22■□□□□ 0.67
HNF4A-202ENST00000316673 CTSWP56202 376 aa19.22■□□□□ 0.67
HNF4A-202ENST00000316673 HDAC1Q13547 482 aaPredicted RBP19.22■□□□□ 0.67
HNF4A-202ENST00000316673 STYK1Q6J9G0 422 aa19.22■□□□□ 0.67
HNF4A-202ENST00000316673 JARID2Q92833 1246 aaPredicted RBP19.22■□□□□ 0.67
HNF4A-202ENST00000316673 MASTLQ96GX5 879 aa19.22■□□□□ 0.67
HNF4A-202ENST00000316673 MEIS3Q99687 375 aa19.22■□□□□ 0.67
HNF4A-202ENST00000316673 SYT17Q9BSW7 474 aa19.22■□□□□ 0.67
HNF4A-202ENST00000316673 MYH3P11055 1940 aa19.22■□□□□ 0.67
HNF4A-202ENST00000316673 HOXA10P31260 410 aaPredicted RBP19.22■□□□□ 0.67
HNF4A-202ENST00000316673 RBM17Q96I25 401 aaKnown RBP19.22■□□□□ 0.67
HNF4A-202ENST00000316673 GNAI2P04899 355 aa19.21■□□□□ 0.67
HNF4A-202ENST00000316673 ALDH1B1P30837 517 aa19.21■□□□□ 0.67
HNF4A-202ENST00000316673 DDX46Q7L014 1031 aaKnown RBP19.21■□□□□ 0.67
HNF4A-202ENST00000316673 RPAP2Q8IXW5 612 aaPredicted RBP19.21■□□□□ 0.67
HNF4A-202ENST00000316673 CNKSR1Q969H4 720 aa19.21■□□□□ 0.67
HNF4A-202ENST00000316673 KDM2BQ8NHM5 1336 aa19.21■□□□□ 0.67
HNF4A-202ENST00000316673 TNRC6CQ9HCJ0 1690 aaKnown RBP19.2■□□□□ 0.66
HNF4A-202ENST00000316673 HMMRO75330 724 aa19.2■□□□□ 0.66
HNF4A-202ENST00000316673 CSF1RP07333 972 aa19.2■□□□□ 0.66
HNF4A-202ENST00000316673 DPEP1P16444 411 aa19.2■□□□□ 0.66
HNF4A-202ENST00000316673 TTLL11Q8NHH1 800 aa19.2■□□□□ 0.66
HNF4A-202ENST00000316673 SUCLG2Q96I99 432 aa19.2■□□□□ 0.66
HNF4A-202ENST00000316673 CRAMP1Q96RY5 1269 aa19.2■□□□□ 0.66
HNF4A-202ENST00000316673 PIM2Q9P1W9 311 aa19.2■□□□□ 0.66
HNF4A-202ENST00000316673 RTL9Q8NET4 1388 aa19.2■□□□□ 0.66
HNF4A-202ENST00000316673 A0A0G2JLW4 131 aa19.19■□□□□ 0.66
HNF4A-202ENST00000316673 RABL6Q3YEC7 729 aaPredicted RBP19.19■□□□□ 0.66
HNF4A-202ENST00000316673 PCDHB15Q9Y5E8 787 aa19.19■□□□□ 0.66
HNF4A-202ENST00000316673 DLEC1Q9Y238 1755 aa19.19■□□□□ 0.66
HNF4A-202ENST00000316673 CHRNA5P30532 468 aa19.18■□□□□ 0.66
HNF4A-202ENST00000316673 FOXO4P98177 505 aa19.18■□□□□ 0.66
HNF4A-202ENST00000316673 C3orf67Q6ZVT6 689 aa19.18■□□□□ 0.66
HNF4A-202ENST00000316673 ZNF622Q969S3 477 aaKnown RBP eCLIP19.18■□□□□ 0.66
HNF4A-202ENST00000316673 LMBR1LQ6UX01 489 aa19.17■□□□□ 0.66
HNF4A-202ENST00000316673 TTLL6Q8N841 843 aa19.17■□□□□ 0.66
HNF4A-202ENST00000316673 CDC5LQ99459 802 aaKnown RBP19.17■□□□□ 0.66
HNF4A-202ENST00000316673 BICC1Q9H694 974 aaKnown RBP19.17■□□□□ 0.66
HNF4A-202ENST00000316673 LRRFIP2Q9Y608 721 aaKnown RBP19.17■□□□□ 0.66
HNF4A-202ENST00000316673 KIAA1551Q9HCM1 1747 aa19.17■□□□□ 0.66
HNF4A-202ENST00000316673 TMC4Q7Z404 712 aa19.16■□□□□ 0.66
HNF4A-202ENST00000316673 NLGN2Q8NFZ4 835 aa19.16■□□□□ 0.66
HNF4A-202ENST00000316673 GCC1Q96CN9 775 aa19.16■□□□□ 0.66
HNF4A-202ENST00000316673 KAZALD1Q96I82 304 aa19.16■□□□□ 0.66
HNF4A-202ENST00000316673 COL11A2P13942 1736 aaPredicted RBP19.16■□□□□ 0.66
HNF4A-202ENST00000316673 BBOX1O75936 387 aa19.16■□□□□ 0.66
HNF4A-202ENST00000316673 KCNA3P22001 575 aa19.16■□□□□ 0.66
HNF4A-202ENST00000316673 IFIT5Q13325 482 aaKnown RBP19.16■□□□□ 0.66
HNF4A-202ENST00000316673 CCDC57Q2TAC2 916 aa19.16■□□□□ 0.66
HNF4A-202ENST00000316673 DALRD3Q5D0E6 543 aaKnown RBP19.16■□□□□ 0.66
HNF4A-202ENST00000316673 EPHA10Q5JZY3 1008 aa19.16■□□□□ 0.66
HNF4A-202ENST00000316673 CHMP3Q9Y3E7 222 aa19.16■□□□□ 0.66
HNF4A-202ENST00000316673 ANKRD18BA2A2Z9 1011 aa19.15■□□□□ 0.66
HNF4A-202ENST00000316673 MTX1Q13505 466 aa19.15■□□□□ 0.66
HNF4A-202ENST00000316673 GRAPQ13588 217 aa19.15■□□□□ 0.66
HNF4A-202ENST00000316673 ANKRD44Q8N8A2 993 aa19.15■□□□□ 0.66
HNF4A-202ENST00000316673 GRAPLQ8TC17 118 aaPredicted RBP19.15■□□□□ 0.66
HNF4A-202ENST00000316673 ZBTB47Q9UFB7 747 aaPredicted RBP19.15■□□□□ 0.66
HNF4A-202ENST00000316673 ITGA6P23229 1130 aa19.14■□□□□ 0.65
HNF4A-202ENST00000316673 TMX4Q9H1E5 349 aaPredicted RBP19.14■□□□□ 0.65
HNF4A-202ENST00000316673 GREM2Q9H772 168 aa19.14■□□□□ 0.65
HNF4A-202ENST00000316673 IGHDP01880 384 aa19.13■□□□□ 0.65
HNF4A-202ENST00000316673 RPS8P62241 208 aaKnown RBP19.13■□□□□ 0.65
HNF4A-202ENST00000316673 FAM161AQ3B820 660 aa19.13■□□□□ 0.65
HNF4A-202ENST00000316673 SOGA3Q5TF21 947 aa19.13■□□□□ 0.65
HNF4A-202ENST00000316673 ANKRD18AQ8IVF6 992 aa19.13■□□□□ 0.65
HNF4A-202ENST00000316673 BRCA1P38398 1863 aaKnown RBP19.13■□□□□ 0.65
HNF4A-202ENST00000316673 IGHMBP2P38935 993 aaKnown RBP19.12■□□□□ 0.65
HNF4A-202ENST00000316673 GRIPAP1Q4V328 841 aa19.12■□□□□ 0.65
HNF4A-202ENST00000316673 CC2D2BQ6DHV5 1058 aa19.12■□□□□ 0.65
HNF4A-202ENST00000316673 PRPF40BQ6NWY9 871 aaKnown RBP19.12■□□□□ 0.65
HNF4A-202ENST00000316673 CCDC85AQ96PX6 553 aaPredicted RBP19.12■□□□□ 0.65
HNF4A-202ENST00000316673 TAF7LQ5H9L4 462 aa19.11■□□□□ 0.65
HNF4A-202ENST00000316673 MPHOSPH8Q99549 860 aa19.1■□□□□ 0.65
HNF4A-202ENST00000316673 C1orf115Q9H7X2 142 aa19.1■□□□□ 0.65
HNF4A-202ENST00000316673 SEC31BQ9NQW1 1179 aa19.1■□□□□ 0.65
HNF4A-202ENST00000316673 PPEF1O14829 653 aaPredicted RBP19.09■□□□□ 0.65
HNF4A-202ENST00000316673 SRGAP3O43295 1099 aa19.09■□□□□ 0.65
HNF4A-202ENST00000316673 ATP8B2P98198 1209 aa19.09■□□□□ 0.65
HNF4A-202ENST00000316673 CEP85Q6P2H3 762 aa19.09■□□□□ 0.65
HNF4A-202ENST00000316673 SMC5Q8IY18 1101 aa19.09■□□□□ 0.65
HNF4A-202ENST00000316673 CELF1Q92879 486 aaKnown RBP19.09■□□□□ 0.65
HNF4A-202ENST00000316673 BSDC1Q9NW68 430 aaPredicted RBP19.09■□□□□ 0.65
HNF4A-202ENST00000316673 BCS1LQ9Y276 419 aa19.09■□□□□ 0.65
HNF4A-202ENST00000316673 SP8Q8IXZ3 490 aa19.09■□□□□ 0.65
HNF4A-202ENST00000316673 FBXO3Q9UK99 471 aa19.09■□□□□ 0.65
HNF4A-202ENST00000316673 ATP6V0A2Q9Y487 856 aa19.09■□□□□ 0.65
HNF4A-202ENST00000316673 SLX4Q8IY92 1834 aa19.07■□□□□ 0.64
HNF4A-202ENST00000316673 ARFGEF1Q9Y6D6 1849 aa19.07■□□□□ 0.64
HNF4A-202ENST00000316673 ZNF784Q8NCA9 323 aaPredicted RBP19.07■□□□□ 0.64
HNF4A-202ENST00000316673 SSH3Q8TE77 659 aa19.07■□□□□ 0.64
HNF4A-202ENST00000316673 LDHAL6AQ6ZMR3 332 aa19.06■□□□□ 0.64
HNF4A-202ENST00000316673 RTKN2Q8IZC4 609 aa19.06■□□□□ 0.64
HNF4A-202ENST00000316673 C7orf43Q8WVR3 580 aa19.06■□□□□ 0.64
HNF4A-202ENST00000316673 COPRSQ9NQ92 184 aa19.06■□□□□ 0.64
HNF4A-202ENST00000316673 CACNA1SQ13698 1873 aa19.06■□□□□ 0.64
HNF4A-202ENST00000316673 GRIN3BO60391 1043 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms