RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 MBIPQ9NS73 344 aa22.74■■□□□ 1.23
EXOSC4-201ENST00000316052 DBF4Q9UBU7 674 aaPredicted RBP22.74■■□□□ 1.23
EXOSC4-201ENST00000316052 ZNRF3Q9ULT6 936 aa22.74■■□□□ 1.23
EXOSC4-201ENST00000316052 ATP5J2-PTCD1G3V325 749 aa22.73■■□□□ 1.23
EXOSC4-201ENST00000316052 SUPT20HQ8NEM7 779 aa22.73■■□□□ 1.23
EXOSC4-201ENST00000316052 FOXN1O15353 648 aa22.72■■□□□ 1.23
EXOSC4-201ENST00000316052 CAPN15O75808 1086 aa22.72■■□□□ 1.23
EXOSC4-201ENST00000316052 ZNF853P0CG23 659 aa22.72■■□□□ 1.23
EXOSC4-201ENST00000316052 FAM89AQ96GI7 184 aa22.72■■□□□ 1.23
EXOSC4-201ENST00000316052 DDX60Q8IY21 1712 aaKnown RBP22.71■■□□□ 1.23
EXOSC4-201ENST00000316052 RASSF10A6NK89 507 aa22.71■■□□□ 1.23
EXOSC4-201ENST00000316052 APAF1O14727 1248 aa22.71■■□□□ 1.23
EXOSC4-201ENST00000316052 KIAA2012Q0VF49 1180 aa22.71■■□□□ 1.23
EXOSC4-201ENST00000316052 DEFB115Q30KQ5 88 aa22.71■■□□□ 1.23
EXOSC4-201ENST00000316052 USP50Q70EL3 339 aaPredicted RBP22.71■■□□□ 1.23
EXOSC4-201ENST00000316052 HYPKQ9NX55 129 aa22.71■■□□□ 1.23
EXOSC4-201ENST00000316052 GPRC5DQ9NZD1 345 aa22.71■■□□□ 1.23
EXOSC4-201ENST00000316052 TRAF5O00463 557 aa22.69■■□□□ 1.22
EXOSC4-201ENST00000316052 GMPSP49915 693 aaPredicted RBP22.69■■□□□ 1.22
EXOSC4-201ENST00000316052 RTL5Q5HYW3 569 aaPredicted RBP22.69■■□□□ 1.22
EXOSC4-201ENST00000316052 RAD17O75943 681 aa22.68■■□□□ 1.22
EXOSC4-201ENST00000316052 SF3B3Q15393 1217 aaKnown RBP22.68■■□□□ 1.22
EXOSC4-201ENST00000316052 CELF1Q92879 486 aaKnown RBP22.68■■□□□ 1.22
EXOSC4-201ENST00000316052 ADARB2Q9NS39 739 aaKnown RBP22.68■■□□□ 1.22
EXOSC4-201ENST00000316052 ABT1Q9ULW3 272 aaKnown RBP22.68■■□□□ 1.22
EXOSC4-201ENST00000316052 YDJCA8MPS7 323 aa22.67■■□□□ 1.22
EXOSC4-201ENST00000316052 ELL2O00472 640 aaPredicted RBP22.67■■□□□ 1.22
EXOSC4-201ENST00000316052 TRIM28Q13263 835 aaKnown RBP22.67■■□□□ 1.22
EXOSC4-201ENST00000316052 CST9Q5W186 159 aa22.67■■□□□ 1.22
EXOSC4-201ENST00000316052 CIAPIN1Q6FI81 312 aa22.67■■□□□ 1.22
EXOSC4-201ENST00000316052 WBP1LQ9NX94 342 aa22.67■■□□□ 1.22
EXOSC4-201ENST00000316052 COL4A1P02462 1669 aa22.67■■□□□ 1.22
EXOSC4-201ENST00000316052 DUOX1Q9NRD9 1551 aa22.67■■□□□ 1.22
EXOSC4-201ENST00000316052 TMC4Q7Z404 712 aa22.66■■□□□ 1.22
EXOSC4-201ENST00000316052 PHAXQ9H814 394 aaKnown RBP22.66■■□□□ 1.22
EXOSC4-201ENST00000316052 IFT57Q9NWB7 429 aa22.66■■□□□ 1.22
EXOSC4-201ENST00000316052 TRPM7Q96QT4 1865 aa22.66■■□□□ 1.22
EXOSC4-201ENST00000316052 WDR33Q9C0J8 1336 aaKnown RBP22.65■■□□□ 1.22
EXOSC4-201ENST00000316052 LRRC37AA6NMS7 1700 aa22.65■■□□□ 1.22
EXOSC4-201ENST00000316052 IRS4O14654 1257 aaPredicted RBP22.64■■□□□ 1.21
EXOSC4-201ENST00000316052 GNAI1P63096 354 aa22.64■■□□□ 1.21
EXOSC4-201ENST00000316052 TNIP1Q15025 636 aa22.64■■□□□ 1.21
EXOSC4-201ENST00000316052 RIC3Q7Z5B4 369 aa22.64■■□□□ 1.21
EXOSC4-201ENST00000316052 C8orf58Q8NAV2 365 aa22.64■■□□□ 1.21
EXOSC4-201ENST00000316052 NSFL1CQ9UNZ2 370 aaKnown RBP22.64■■□□□ 1.21
EXOSC4-201ENST00000316052 SHTN1A0MZ66 631 aa22.63■■□□□ 1.21
EXOSC4-201ENST00000316052 CTCFP49711 727 aaPredicted RBP22.63■■□□□ 1.21
EXOSC4-201ENST00000316052 HIRAP54198 1017 aaPredicted RBP22.63■■□□□ 1.21
EXOSC4-201ENST00000316052 AIDAQ96BJ3 306 aa22.63■■□□□ 1.21
EXOSC4-201ENST00000316052 BCL2L13Q9BXK5 485 aa22.63■■□□□ 1.21
EXOSC4-201ENST00000316052 POLLQ9UGP5 575 aa22.63■■□□□ 1.21
EXOSC4-201ENST00000316052 PGAP2Q9UHJ9 254 aa22.63■■□□□ 1.21
EXOSC4-201ENST00000316052 GPSM2P81274 684 aa22.62■■□□□ 1.21
EXOSC4-201ENST00000316052 WASHC4Q2M389 1173 aa22.62■■□□□ 1.21
EXOSC4-201ENST00000316052 PRDM10Q9NQV6 1147 aa22.62■■□□□ 1.21
EXOSC4-201ENST00000316052 ZBTB38Q8NAP3 1195 aaPredicted RBP22.61■■□□□ 1.21
EXOSC4-201ENST00000316052 TRPM4Q8TD43 1214 aa22.61■■□□□ 1.21
EXOSC4-201ENST00000316052 CNOT7Q9UIV1 285 aaKnown RBP22.61■■□□□ 1.21
EXOSC4-201ENST00000316052 RIMBP2O15034 1052 aa22.6■■□□□ 1.21
EXOSC4-201ENST00000316052 LBX1P52954 281 aa22.6■■□□□ 1.21
EXOSC4-201ENST00000316052 RPS8P62241 208 aaKnown RBP22.6■■□□□ 1.21
EXOSC4-201ENST00000316052 CALD1Q05682 793 aaKnown RBP22.6■■□□□ 1.21
EXOSC4-201ENST00000316052 GOLGA2Q08379 1002 aa22.6■■□□□ 1.21
EXOSC4-201ENST00000316052 CAPNS2Q96L46 248 aa22.6■■□□□ 1.21
EXOSC4-201ENST00000316052 MYD88Q99836 296 aa22.6■■□□□ 1.21
EXOSC4-201ENST00000316052 GLIS2Q9BZE0 524 aaPredicted RBP22.6■■□□□ 1.21
EXOSC4-201ENST00000316052 DBNDD1Q9H9R9 158 aa22.6■■□□□ 1.21
EXOSC4-201ENST00000316052 ZBTB12Q9Y330 459 aaPredicted RBP22.6■■□□□ 1.21
EXOSC4-201ENST00000316052 CDHR2Q9BYE9 1310 aa22.59■■□□□ 1.21
EXOSC4-201ENST00000316052 C6orf229H3BNL8 230 aa22.59■■□□□ 1.21
EXOSC4-201ENST00000316052 CCDC184Q52MB2 194 aa22.59■■□□□ 1.21
EXOSC4-201ENST00000316052 CYP4F22Q6NT55 531 aa22.59■■□□□ 1.21
EXOSC4-201ENST00000316052 JARID2Q92833 1246 aaPredicted RBP22.59■■□□□ 1.21
EXOSC4-201ENST00000316052 GPR101Q96P66 508 aaPredicted RBP22.59■■□□□ 1.21
EXOSC4-201ENST00000316052 SEC31BQ9NQW1 1179 aa22.59■■□□□ 1.21
EXOSC4-201ENST00000316052 KCNQ5Q9NR82 932 aa22.59■■□□□ 1.21
EXOSC4-201ENST00000316052 TLL2Q9Y6L7 1015 aa22.59■■□□□ 1.21
EXOSC4-201ENST00000316052 PSMD14O00487 310 aa22.58■■□□□ 1.21
EXOSC4-201ENST00000316052 TSPYL6Q8N831 410 aa22.58■■□□□ 1.21
EXOSC4-201ENST00000316052 ZC3H15Q8WU90 426 aaKnown RBP22.58■■□□□ 1.21
EXOSC4-201ENST00000316052 POLR2AP24928 1970 aaKnown RBP22.58■■□□□ 1.2
EXOSC4-201ENST00000316052 CELF2O95319 508 aaKnown RBP22.57■■□□□ 1.2
EXOSC4-201ENST00000316052 HSPA8P11142 646 aaKnown RBP22.57■■□□□ 1.2
EXOSC4-201ENST00000316052 MAP2K1Q02750 393 aaPredicted RBP22.57■■□□□ 1.2
EXOSC4-201ENST00000316052 PAXIP1Q6ZW49 1069 aaPredicted RBP22.57■■□□□ 1.2
EXOSC4-201ENST00000316052 MICALL2Q8IY33 904 aa22.57■■□□□ 1.2
EXOSC4-201ENST00000316052 TBC1D16Q8TBP0 767 aa22.57■■□□□ 1.2
EXOSC4-201ENST00000316052 H7C1D1 291 aa22.56■■□□□ 1.2
EXOSC4-201ENST00000316052 GRM1Q13255 1194 aa22.56■■□□□ 1.2
EXOSC4-201ENST00000316052 DOK7Q18PE1 504 aa22.56■■□□□ 1.2
EXOSC4-201ENST00000316052 CCDC191Q8NCU4 936 aa22.56■■□□□ 1.2
EXOSC4-201ENST00000316052 ECE2O60344 883 aa22.55■■□□□ 1.2
EXOSC4-201ENST00000316052 PCCAP05165 728 aaPredicted RBP22.55■■□□□ 1.2
EXOSC4-201ENST00000316052 ECE1P42892 770 aa22.55■■□□□ 1.2
EXOSC4-201ENST00000316052 CCDC30Q5VVM6 783 aa22.55■■□□□ 1.2
EXOSC4-201ENST00000316052 SAMD7Q7Z3H4 446 aa22.55■■□□□ 1.2
EXOSC4-201ENST00000316052 SAPCD2Q86UD0 394 aa22.55■■□□□ 1.2
EXOSC4-201ENST00000316052 DPF2Q92785 391 aa22.55■■□□□ 1.2
EXOSC4-201ENST00000316052 METTL22Q9BUU2 404 aaPredicted RBP22.55■■□□□ 1.2
EXOSC4-201ENST00000316052 RTL9Q8NET4 1388 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms