RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 ERVV-2B6SEH9 535 aa13.81□□□□□ -0.2
LDLRAD3-201ENST00000315571 ILDR1Q86SU0 546 aaPredicted RBP13.81□□□□□ -0.2
LDLRAD3-201ENST00000315571 BABAM1Q9NWV8 329 aa13.81□□□□□ -0.2
LDLRAD3-201ENST00000315571 CCDC91Q7Z6B0 441 aa13.8□□□□□ -0.2
LDLRAD3-201ENST00000315571 MARCH10Q8NA82 808 aaPredicted RBP13.8□□□□□ -0.2
LDLRAD3-201ENST00000315571 TMOD3Q9NYL9 352 aa13.8□□□□□ -0.2
LDLRAD3-201ENST00000315571 ELL2O00472 640 aaPredicted RBP13.8□□□□□ -0.2
LDLRAD3-201ENST00000315571 ELF2Q15723 593 aa13.8□□□□□ -0.2
LDLRAD3-201ENST00000315571 GLI3P10071 1580 aa13.8□□□□□ -0.2
LDLRAD3-201ENST00000315571 ZSCAN26Q16670 478 aa13.8□□□□□ -0.2
LDLRAD3-201ENST00000315571 MORC2Q9Y6X9 1032 aaPredicted RBP13.8□□□□□ -0.2
LDLRAD3-201ENST00000315571 RXRBP28702 533 aa13.79□□□□□ -0.2
LDLRAD3-201ENST00000315571 DZIP1LQ8IYY4 767 aaKnown RBP13.79□□□□□ -0.2
LDLRAD3-201ENST00000315571 TTC5Q8N0Z6 440 aa13.79□□□□□ -0.2
LDLRAD3-201ENST00000315571 NSFL1CQ9UNZ2 370 aaKnown RBP13.79□□□□□ -0.2
LDLRAD3-201ENST00000315571 MNAT1P51948 309 aa13.79□□□□□ -0.2
LDLRAD3-201ENST00000315571 ZGPATQ8N5A5 531 aaKnown RBP13.79□□□□□ -0.2
LDLRAD3-201ENST00000315571 CWC22Q9HCG8 908 aaKnown RBP13.79□□□□□ -0.2
LDLRAD3-201ENST00000315571 IBSPP21815 317 aaPredicted RBP13.79□□□□□ -0.2
LDLRAD3-201ENST00000315571 PTGS1P23219 599 aa13.79□□□□□ -0.2
LDLRAD3-201ENST00000315571 OS9Q13438 667 aaPredicted RBP13.79□□□□□ -0.2
LDLRAD3-201ENST00000315571 RABEP1Q15276 862 aa13.79□□□□□ -0.2
LDLRAD3-201ENST00000315571 ZKSCAN2Q63HK3 967 aa13.79□□□□□ -0.2
LDLRAD3-201ENST00000315571 ZBTB12Q9Y330 459 aaPredicted RBP13.79□□□□□ -0.2
LDLRAD3-201ENST00000315571 CT47A1Q5JQC4 288 aaPredicted RBP13.78□□□□□ -0.2
LDLRAD3-201ENST00000315571 TRMT1Q9NXH9 659 aaKnown RBP13.78□□□□□ -0.2
LDLRAD3-201ENST00000315571 PAXBP1Q9Y5B6 917 aa13.78□□□□□ -0.2
LDLRAD3-201ENST00000315571 PSEN1P49768 467 aa13.78□□□□□ -0.2
LDLRAD3-201ENST00000315571 CEP135Q66GS9 1140 aa13.78□□□□□ -0.2
LDLRAD3-201ENST00000315571 TMCO3Q6UWJ1 677 aa13.78□□□□□ -0.2
LDLRAD3-201ENST00000315571 CCAR2Q8N163 923 aaKnown RBP13.78□□□□□ -0.2
LDLRAD3-201ENST00000315571 WNK3Q9BYP7 1800 aa13.78□□□□□ -0.2
LDLRAD3-201ENST00000315571 ONECUT3O60422 494 aaPredicted RBP13.78□□□□□ -0.2
LDLRAD3-201ENST00000315571 TWISTNBQ3B726 338 aaPredicted RBP13.78□□□□□ -0.2
LDLRAD3-201ENST00000315571 ACSBG1Q96GR2 724 aa13.78□□□□□ -0.2
LDLRAD3-201ENST00000315571 LRRC37A3O60309 1634 aa13.77□□□□□ -0.2
LDLRAD3-201ENST00000315571 SETQ01105 290 aaPredicted RBP13.77□□□□□ -0.2
LDLRAD3-201ENST00000315571 SLC39A6Q13433 755 aa13.77□□□□□ -0.2
LDLRAD3-201ENST00000315571 CCDC186Q7Z3E2 898 aa13.77□□□□□ -0.2
LDLRAD3-201ENST00000315571 ANKRD20A12PQ8NF67 263 aa13.77□□□□□ -0.2
LDLRAD3-201ENST00000315571 GOLGA6L4A6NEF3 574 aa13.77□□□□□ -0.21
LDLRAD3-201ENST00000315571 TULP2O00295 520 aa13.77□□□□□ -0.21
LDLRAD3-201ENST00000315571 CT47B1P0C2W7 299 aaPredicted RBP13.77□□□□□ -0.21
LDLRAD3-201ENST00000315571 RLBP1P12271 317 aa13.77□□□□□ -0.21
LDLRAD3-201ENST00000315571 PTPN14Q15678 1187 aa13.77□□□□□ -0.21
LDLRAD3-201ENST00000315571 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.77□□□□□ -0.21
LDLRAD3-201ENST00000315571 C8orf58Q8NAV2 365 aa13.77□□□□□ -0.21
LDLRAD3-201ENST00000315571 KRT24Q2M2I5 525 aa13.76□□□□□ -0.21
LDLRAD3-201ENST00000315571 UVSSAQ2YD98 709 aa13.76□□□□□ -0.21
LDLRAD3-201ENST00000315571 KCNQ3O43525 872 aa13.76□□□□□ -0.21
LDLRAD3-201ENST00000315571 PPP2R5AQ15172 486 aa13.76□□□□□ -0.21
LDLRAD3-201ENST00000315571 MNS1Q8NEH6 495 aa13.76□□□□□ -0.21
LDLRAD3-201ENST00000315571 KIAA1524Q8TCG1 905 aa13.76□□□□□ -0.21
LDLRAD3-201ENST00000315571 ZNF215Q9UL58 517 aaPredicted RBP13.76□□□□□ -0.21
LDLRAD3-201ENST00000315571 MAP2K2P36507 400 aa13.76□□□□□ -0.21
LDLRAD3-201ENST00000315571 ZNF790Q6PG37 636 aa13.76□□□□□ -0.21
LDLRAD3-201ENST00000315571 TSPYL6Q8N831 410 aa13.76□□□□□ -0.21
LDLRAD3-201ENST00000315571 DNAAF4Q8WXU2 420 aa13.76□□□□□ -0.21
LDLRAD3-201ENST00000315571 FAM182BQ5T319 152 aa13.75□□□□□ -0.21
LDLRAD3-201ENST00000315571 HOMER1Q86YM7 354 aa13.75□□□□□ -0.21
LDLRAD3-201ENST00000315571 SHANK3Q9BYB0 1731 aa13.75□□□□□ -0.21
LDLRAD3-201ENST00000315571 MMP14P50281 582 aa13.75□□□□□ -0.21
LDLRAD3-201ENST00000315571 FIBPO43427 364 aa13.75□□□□□ -0.21
LDLRAD3-201ENST00000315571 KDM4AO75164 1064 aa13.74□□□□□ -0.21
LDLRAD3-201ENST00000315571 EIF4A1P60842 406 aaKnown RBP13.74□□□□□ -0.21
LDLRAD3-201ENST00000315571 HSP90AB3PQ58FF7 597 aa13.74□□□□□ -0.21
LDLRAD3-201ENST00000315571 LRCH2Q5VUJ6 765 aa13.74□□□□□ -0.21
LDLRAD3-201ENST00000315571 KRT27Q7Z3Y8 459 aa13.74□□□□□ -0.21
LDLRAD3-201ENST00000315571 RGS17Q9UGC6 210 aaPredicted RBP13.74□□□□□ -0.21
LDLRAD3-201ENST00000315571 MRC1P22897 1456 aa13.74□□□□□ -0.21
LDLRAD3-201ENST00000315571 THSD7AQ9UPZ6 1657 aa13.74□□□□□ -0.21
LDLRAD3-201ENST00000315571 KMT5BQ4FZB7 885 aa13.74□□□□□ -0.21
LDLRAD3-201ENST00000315571 POTEAQ6S8J7 498 aa13.74□□□□□ -0.21
LDLRAD3-201ENST00000315571 PIGBQ92521 554 aa13.74□□□□□ -0.21
LDLRAD3-201ENST00000315571 BRMS1Q9HCU9 246 aa13.74□□□□□ -0.21
LDLRAD3-201ENST00000315571 SCN11AQ9UI33 1791 aa13.74□□□□□ -0.21
LDLRAD3-201ENST00000315571 GIMAP7Q8NHV1 300 aa13.74□□□□□ -0.21
LDLRAD3-201ENST00000315571 ADAMTS7Q9UKP4 1686 aa13.73□□□□□ -0.21
LDLRAD3-201ENST00000315571 CYP2C19P33261 490 aa13.73□□□□□ -0.21
LDLRAD3-201ENST00000315571 PLCD4Q9BRC7 762 aa13.73□□□□□ -0.21
LDLRAD3-201ENST00000315571 VAMP4O75379 141 aa13.73□□□□□ -0.21
LDLRAD3-201ENST00000315571 GUCY2CP25092 1073 aa13.73□□□□□ -0.21
LDLRAD3-201ENST00000315571 NEK4P51957 841 aa13.73□□□□□ -0.21
LDLRAD3-201ENST00000315571 MVPQ14764 893 aaKnown RBP13.73□□□□□ -0.21
LDLRAD3-201ENST00000315571 GIMAP6Q6P9H5 292 aa13.73□□□□□ -0.21
LDLRAD3-201ENST00000315571 CREBRFQ8IUR6 639 aa13.73□□□□□ -0.21
LDLRAD3-201ENST00000315571 ZNF428Q96B54 188 aa13.73□□□□□ -0.21
LDLRAD3-201ENST00000315571 FMNL2Q96PY5 1086 aa13.73□□□□□ -0.21
LDLRAD3-201ENST00000315571 RRP15Q9Y3B9 282 aaKnown RBP13.73□□□□□ -0.21
LDLRAD3-201ENST00000315571 ATP6V1AP38606 617 aa13.73□□□□□ -0.21
LDLRAD3-201ENST00000315571 RARSP54136 660 aaKnown RBP13.73□□□□□ -0.21
LDLRAD3-201ENST00000315571 FBXO38Q6PIJ6 1188 aa13.73□□□□□ -0.21
LDLRAD3-201ENST00000315571 UBXN4Q92575 508 aa13.73□□□□□ -0.21
LDLRAD3-201ENST00000315571 PTCD1O75127 700 aaKnown RBP13.72□□□□□ -0.21
LDLRAD3-201ENST00000315571 LRMPQ12912 555 aa13.72□□□□□ -0.21
LDLRAD3-201ENST00000315571 DNAJC21Q5F1R6 531 aaKnown RBP13.72□□□□□ -0.21
LDLRAD3-201ENST00000315571 TBC1D9Q6ZT07 1266 aa13.72□□□□□ -0.21
LDLRAD3-201ENST00000315571 ANKRD65E5RJM6 399 aa13.72□□□□□ -0.21
LDLRAD3-201ENST00000315571 RPAINQ86UA6 219 aa13.72□□□□□ -0.21
LDLRAD3-201ENST00000315571 CCDC34Q96HJ3 373 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms