RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 NPR1P16066 1061 aa11.48□□□□□ -0.57
PDE4D-201ENST00000309641 CTSWP56202 376 aa11.48□□□□□ -0.57
PDE4D-201ENST00000309641 FOXO4P98177 505 aa11.48□□□□□ -0.57
PDE4D-201ENST00000309641 UTYO14607 1347 aa11.48□□□□□ -0.57
PDE4D-201ENST00000309641 SF3B3Q15393 1217 aaKnown RBP11.48□□□□□ -0.57
PDE4D-201ENST00000309641 STYK1Q6J9G0 422 aa11.48□□□□□ -0.57
PDE4D-201ENST00000309641 PRPF40BQ6NWY9 871 aaKnown RBP11.48□□□□□ -0.57
PDE4D-201ENST00000309641 TTLL6Q8N841 843 aa11.48□□□□□ -0.57
PDE4D-201ENST00000309641 TTLL11Q8NHH1 800 aa11.48□□□□□ -0.57
PDE4D-201ENST00000309641 RPGRQ92834 1020 aaKnown RBP11.48□□□□□ -0.57
PDE4D-201ENST00000309641 HOXA10P31260 410 aaPredicted RBP11.47□□□□□ -0.57
PDE4D-201ENST00000309641 GPR162Q16538 588 aa11.47□□□□□ -0.57
PDE4D-201ENST00000309641 DALRD3Q5D0E6 543 aaKnown RBP11.47□□□□□ -0.57
PDE4D-201ENST00000309641 FTSJ3Q8IY81 847 aaKnown RBP11.47□□□□□ -0.57
PDE4D-201ENST00000309641 GREM2Q9H772 168 aa11.47□□□□□ -0.57
PDE4D-201ENST00000309641 C21orf2O43822 256 aa11.47□□□□□ -0.57
PDE4D-201ENST00000309641 CELF1Q92879 486 aaKnown RBP11.47□□□□□ -0.57
PDE4D-201ENST00000309641 PLA2G12BQ9BX93 195 aa11.47□□□□□ -0.57
PDE4D-201ENST00000309641 FAM161AQ3B820 660 aa11.46□□□□□ -0.57
PDE4D-201ENST00000309641 LMBR1LQ6UX01 489 aa11.46□□□□□ -0.57
PDE4D-201ENST00000309641 ITPRIPQ8IWB1 547 aa11.46□□□□□ -0.57
PDE4D-201ENST00000309641 C7orf43Q8WVR3 580 aa11.46□□□□□ -0.57
PDE4D-201ENST00000309641 BICC1Q9H694 974 aaKnown RBP11.46□□□□□ -0.57
PDE4D-201ENST00000309641 PDZRN3Q9UPQ7 1066 aa11.46□□□□□ -0.57
PDE4D-201ENST00000309641 COG6Q9Y2V7 657 aa11.46□□□□□ -0.57
PDE4D-201ENST00000309641 MYH3P11055 1940 aa11.46□□□□□ -0.58
PDE4D-201ENST00000309641 CSF1RP07333 972 aa11.45□□□□□ -0.58
PDE4D-201ENST00000309641 RRP1P56182 461 aaKnown RBP11.45□□□□□ -0.58
PDE4D-201ENST00000309641 ANKRD44Q8N8A2 993 aa11.45□□□□□ -0.58
PDE4D-201ENST00000309641 CNKSR1Q969H4 720 aa11.45□□□□□ -0.58
PDE4D-201ENST00000309641 RBM17Q96I25 401 aaKnown RBP11.45□□□□□ -0.58
PDE4D-201ENST00000309641 CRAMP1Q96RY5 1269 aa11.45□□□□□ -0.58
PDE4D-201ENST00000309641 UBTFL1P0CB47 393 aaPredicted RBP11.45□□□□□ -0.58
PDE4D-201ENST00000309641 ALDH1B1P30837 517 aa11.45□□□□□ -0.58
PDE4D-201ENST00000309641 CCDC152Q4G0S7 254 aa11.45□□□□□ -0.58
PDE4D-201ENST00000309641 DDX46Q7L014 1031 aaKnown RBP11.45□□□□□ -0.58
PDE4D-201ENST00000309641 LRRFIP2Q9Y608 721 aaKnown RBP11.45□□□□□ -0.58
PDE4D-201ENST00000309641 ZBTB7BO15156 539 aaPredicted RBP11.44□□□□□ -0.58
PDE4D-201ENST00000309641 GRAPQ13588 217 aa11.44□□□□□ -0.58
PDE4D-201ENST00000309641 GRAPLQ8TC17 118 aaPredicted RBP11.44□□□□□ -0.58
PDE4D-201ENST00000309641 CHMP3Q9Y3E7 222 aa11.44□□□□□ -0.58
PDE4D-201ENST00000309641 SUPT16HQ9Y5B9 1047 aaKnown RBP11.44□□□□□ -0.58
PDE4D-201ENST00000309641 ITGA6P23229 1130 aa11.43□□□□□ -0.58
PDE4D-201ENST00000309641 C1orf115Q9H7X2 142 aa11.43□□□□□ -0.58
PDE4D-201ENST00000309641 ARFGEF1Q9Y6D6 1849 aa11.43□□□□□ -0.58
PDE4D-201ENST00000309641 PPEF1O14829 653 aaPredicted RBP11.43□□□□□ -0.58
PDE4D-201ENST00000309641 HSP90B1P14625 803 aaKnown RBP11.43□□□□□ -0.58
PDE4D-201ENST00000309641 MVPQ14764 893 aaKnown RBP11.43□□□□□ -0.58
PDE4D-201ENST00000309641 RABL6Q3YEC7 729 aaPredicted RBP11.43□□□□□ -0.58
PDE4D-201ENST00000309641 ZNF594Q96JF6 807 aaPredicted RBP11.43□□□□□ -0.58
PDE4D-201ENST00000309641 PRELPP51888 382 aa11.42□□□□□ -0.58
PDE4D-201ENST00000309641 RPS8P62241 208 aaKnown RBP11.42□□□□□ -0.58
PDE4D-201ENST00000309641 PDE3AQ14432 1141 aa11.42□□□□□ -0.58
PDE4D-201ENST00000309641 ARHGAP27Q6ZUM4 889 aa11.42□□□□□ -0.58
PDE4D-201ENST00000309641 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.42□□□□□ -0.58
PDE4D-201ENST00000309641 KLHDC4Q8TBB5 520 aa11.42□□□□□ -0.58
PDE4D-201ENST00000309641 WTIPA6NIX2 430 aaPredicted RBP11.42□□□□□ -0.58
PDE4D-201ENST00000309641 NFKBIEO00221 500 aa11.42□□□□□ -0.58
PDE4D-201ENST00000309641 RASSF7Q02833 373 aa11.42□□□□□ -0.58
PDE4D-201ENST00000309641 SNED1Q8TER0 1413 aa11.41□□□□□ -0.58
PDE4D-201ENST00000309641 SPEF2Q9C093 1822 aa11.41□□□□□ -0.58
PDE4D-201ENST00000309641 BBOX1O75936 387 aa11.41□□□□□ -0.58
PDE4D-201ENST00000309641 GNAI3P08754 354 aa11.41□□□□□ -0.58
PDE4D-201ENST00000309641 ATP6V0A2Q9Y487 856 aa11.41□□□□□ -0.58
PDE4D-201ENST00000309641 RTL9Q8NET4 1388 aa11.41□□□□□ -0.58
PDE4D-201ENST00000309641 IFIT5Q13325 482 aaKnown RBP11.4□□□□□ -0.58
PDE4D-201ENST00000309641 ANKRD18AQ8IVF6 992 aa11.4□□□□□ -0.58
PDE4D-201ENST00000309641 PNMA6EA0A0J9YXQ4 647 aa11.4□□□□□ -0.59
PDE4D-201ENST00000309641 ANKRD18BA2A2Z9 1011 aa11.4□□□□□ -0.59
PDE4D-201ENST00000309641 GNAI2P04899 355 aa11.4□□□□□ -0.59
PDE4D-201ENST00000309641 MS4A1P11836 297 aa11.4□□□□□ -0.59
PDE4D-201ENST00000309641 RFX5P48382 616 aaPredicted RBP11.4□□□□□ -0.59
PDE4D-201ENST00000309641 CDC5LQ99459 802 aaKnown RBP11.4□□□□□ -0.59
PDE4D-201ENST00000309641 PUS3Q9BZE2 481 aaKnown RBP11.4□□□□□ -0.59
PDE4D-201ENST00000309641 GRIN3BO60391 1043 aa11.39□□□□□ -0.59
PDE4D-201ENST00000309641 CCDC57Q2TAC2 916 aa11.39□□□□□ -0.59
PDE4D-201ENST00000309641 CCDC93Q567U6 631 aa11.39□□□□□ -0.59
PDE4D-201ENST00000309641 SP8Q8IXZ3 490 aa11.39□□□□□ -0.59
PDE4D-201ENST00000309641 ZBTB40Q9NUA8 1239 aa11.39□□□□□ -0.59
PDE4D-201ENST00000309641 FER1L6Q2WGJ9 1857 aa11.39□□□□□ -0.59
PDE4D-201ENST00000309641 SNAP23O00161 211 aa11.38□□□□□ -0.59
PDE4D-201ENST00000309641 IRX6P78412 446 aaPredicted RBP11.38□□□□□ -0.59
PDE4D-201ENST00000309641 GPSM2P81274 684 aa11.38□□□□□ -0.59
PDE4D-201ENST00000309641 GPR101Q96P66 508 aaPredicted RBP11.38□□□□□ -0.59
PDE4D-201ENST00000309641 CRBNQ96SW2 442 aa11.38□□□□□ -0.59
PDE4D-201ENST00000309641 BSDC1Q9NW68 430 aaPredicted RBP11.38□□□□□ -0.59
PDE4D-201ENST00000309641 DDX19BQ9UMR2 479 aa11.38□□□□□ -0.59
PDE4D-201ENST00000309641 PA2G4Q9UQ80 394 aaKnown RBP11.38□□□□□ -0.59
PDE4D-201ENST00000309641 LRRC37AA6NMS7 1700 aa11.38□□□□□ -0.59
PDE4D-201ENST00000309641 LRRC24Q50LG9 513 aa11.38□□□□□ -0.59
PDE4D-201ENST00000309641 HELBQ8NG08 1087 aaPredicted RBP11.38□□□□□ -0.59
PDE4D-201ENST00000309641 ZNF277Q9NRM2 450 aaPredicted RBP11.38□□□□□ -0.59
PDE4D-201ENST00000309641 MINPP1Q9UNW1 487 aa11.38□□□□□ -0.59
PDE4D-201ENST00000309641 NSFL1CQ9UNZ2 370 aaKnown RBP11.38□□□□□ -0.59
PDE4D-201ENST00000309641 DUOX1Q9NRD9 1551 aa11.37□□□□□ -0.59
PDE4D-201ENST00000309641 DCAF8L1A6NGE4 600 aa11.37□□□□□ -0.59
PDE4D-201ENST00000309641 SRGAP3O43295 1099 aa11.37□□□□□ -0.59
PDE4D-201ENST00000309641 IGHMBP2P38935 993 aaKnown RBP11.37□□□□□ -0.59
PDE4D-201ENST00000309641 PTPN12Q05209 780 aaKnown RBP11.37□□□□□ -0.59
PDE4D-201ENST00000309641 LDHAL6AQ6ZMR3 332 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms