RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 GRAPLQ8TC17 118 aaPredicted RBP21.48■■□□□ 1.03
NDUFA3-201ENST00000303553 FKBP4Q02790 459 aaKnown RBP eCLIP21.47■■□□□ 1.03
NDUFA3-201ENST00000303553 CCDC152Q4G0S7 254 aa21.47■■□□□ 1.03
NDUFA3-201ENST00000303553 F6X3S4 739 aa21.46■■□□□ 1.03
NDUFA3-201ENST00000303553 BEND3Q5T5X7 828 aa21.45■■□□□ 1.02
NDUFA3-201ENST00000303553 UBE3BQ7Z3V4 1068 aa21.45■■□□□ 1.02
NDUFA3-201ENST00000303553 PSMD1Q99460 953 aa21.45■■□□□ 1.02
NDUFA3-201ENST00000303553 BCL2L13Q9BXK5 485 aa21.45■■□□□ 1.02
NDUFA3-201ENST00000303553 ATP6V0A2Q9Y487 856 aa21.45■■□□□ 1.02
NDUFA3-201ENST00000303553 LRRC37AA6NMS7 1700 aa21.44■■□□□ 1.02
NDUFA3-201ENST00000303553 H7C1W4 665 aa21.44■■□□□ 1.02
NDUFA3-201ENST00000303553 ALDH1L1O75891 902 aa21.44■■□□□ 1.02
NDUFA3-201ENST00000303553 SLC4A10Q6U841 1118 aa21.44■■□□□ 1.02
NDUFA3-201ENST00000303553 SRCIN1Q9C0H9 1055 aa21.44■■□□□ 1.02
NDUFA3-201ENST00000303553 GPBP1L1Q9HC44 474 aaPredicted RBP21.44■■□□□ 1.02
NDUFA3-201ENST00000303553 BRPF1P55201 1214 aaPredicted RBP21.43■■□□□ 1.02
NDUFA3-201ENST00000303553 CTSWP56202 376 aa21.43■■□□□ 1.02
NDUFA3-201ENST00000303553 SP8Q8IXZ3 490 aa21.43■■□□□ 1.02
NDUFA3-201ENST00000303553 SNED1Q8TER0 1413 aa21.43■■□□□ 1.02
NDUFA3-201ENST00000303553 TAF1P21675 1872 aa21.43■■□□□ 1.02
NDUFA3-201ENST00000303553 KIF16BQ96L93 1317 aa21.42■■□□□ 1.02
NDUFA3-201ENST00000303553 KDM2BQ8NHM5 1336 aa21.41■■□□□ 1.02
NDUFA3-201ENST00000303553 OLFM4Q6UX06 510 aa21.41■■□□□ 1.02
NDUFA3-201ENST00000303553 SUPT20HQ8NEM7 779 aa21.41■■□□□ 1.02
NDUFA3-201ENST00000303553 JARID2Q92833 1246 aaPredicted RBP21.41■■□□□ 1.02
NDUFA3-201ENST00000303553 PLA2G12BQ9BX93 195 aa21.41■■□□□ 1.02
NDUFA3-201ENST00000303553 RTL9Q8NET4 1388 aa21.4■■□□□ 1.02
NDUFA3-201ENST00000303553 PRELPP51888 382 aa21.4■■□□□ 1.02
NDUFA3-201ENST00000303553 RARSP54136 660 aaKnown RBP21.4■■□□□ 1.02
NDUFA3-201ENST00000303553 CDC5LQ99459 802 aaKnown RBP21.4■■□□□ 1.02
NDUFA3-201ENST00000303553 C9orf78Q9NZ63 289 aaPredicted RBP21.4■■□□□ 1.02
NDUFA3-201ENST00000303553 GRM8O00222 908 aa21.39■■□□□ 1.01
NDUFA3-201ENST00000303553 IARSP41252 1262 aaKnown RBP21.39■■□□□ 1.01
NDUFA3-201ENST00000303553 RPS8P62241 208 aaKnown RBP21.39■■□□□ 1.01
NDUFA3-201ENST00000303553 ZNF526Q8TF50 670 aaPredicted RBP21.39■■□□□ 1.01
NDUFA3-201ENST00000303553 CELF1Q92879 486 aaKnown RBP21.39■■□□□ 1.01
NDUFA3-201ENST00000303553 API5Q9BZZ5 524 aaKnown RBP21.39■■□□□ 1.01
NDUFA3-201ENST00000303553 CASP7P55210 303 aa21.38■■□□□ 1.01
NDUFA3-201ENST00000303553 DPP8Q6V1X1 898 aaPredicted RBP21.38■■□□□ 1.01
NDUFA3-201ENST00000303553 MPNDQ8N594 471 aa21.38■■□□□ 1.01
NDUFA3-201ENST00000303553 TTLL11Q8NHH1 800 aa21.38■■□□□ 1.01
NDUFA3-201ENST00000303553 VPS33BQ9H267 617 aa21.38■■□□□ 1.01
NDUFA3-201ENST00000303553 ZNF277Q9NRM2 450 aaPredicted RBP21.38■■□□□ 1.01
NDUFA3-201ENST00000303553 DPY19L2Q6NUT2 758 aa21.37■■□□□ 1.01
NDUFA3-201ENST00000303553 ANKRD18AQ8IVF6 992 aa21.37■■□□□ 1.01
NDUFA3-201ENST00000303553 JDP2Q8WYK2 163 aa21.36■■□□□ 1.01
NDUFA3-201ENST00000303553 ARHGAP45Q92619 1136 aa21.36■■□□□ 1.01
NDUFA3-201ENST00000303553 CCDC85AQ96PX6 553 aaPredicted RBP21.36■■□□□ 1.01
NDUFA3-201ENST00000303553 RTFDC1Q9BY42 306 aaPredicted RBP21.36■■□□□ 1.01
NDUFA3-201ENST00000303553 NOB1Q9ULX3 412 aaKnown RBP21.36■■□□□ 1.01
NDUFA3-201ENST00000303553 SPEF2Q9C093 1822 aa21.35■■□□□ 1.01
NDUFA3-201ENST00000303553 IPO8O15397 1037 aaKnown RBP21.35■■□□□ 1.01
NDUFA3-201ENST00000303553 CCT4P50991 539 aaKnown RBP21.35■■□□□ 1.01
NDUFA3-201ENST00000303553 SEC31BQ9NQW1 1179 aa21.35■■□□□ 1.01
NDUFA3-201ENST00000303553 GLTPD2A6NH11 291 aa21.34■■□□□ 1.01
NDUFA3-201ENST00000303553 GREM2Q9H772 168 aa21.34■■□□□ 1.01
NDUFA3-201ENST00000303553 COL4A1P02462 1669 aa21.34■■□□□ 1.01
NDUFA3-201ENST00000303553 LTBP1Q14766 1721 aa21.33■■□□□ 1.01
NDUFA3-201ENST00000303553 CSF1RP07333 972 aa21.33■■□□□ 1.01
NDUFA3-201ENST00000303553 LARGE2Q8N3Y3 721 aa21.33■■□□□ 1.01
NDUFA3-201ENST00000303553 UTYO14607 1347 aa21.32■■□□□ 1
NDUFA3-201ENST00000303553 PPIP5K2O43314 1243 aa21.32■■□□□ 1
NDUFA3-201ENST00000303553 IGHMBP2P38935 993 aaKnown RBP21.32■■□□□ 1
NDUFA3-201ENST00000303553 NSFL1CQ9UNZ2 370 aaKnown RBP21.32■■□□□ 1
NDUFA3-201ENST00000303553 DUOX1Q9NRD9 1551 aa21.31■■□□□ 1
NDUFA3-201ENST00000303553 ANKRD18BA2A2Z9 1011 aa21.31■■□□□ 1
NDUFA3-201ENST00000303553 ITGA6P23229 1130 aa21.31■■□□□ 1
NDUFA3-201ENST00000303553 FAM161AQ3B820 660 aa21.31■■□□□ 1
NDUFA3-201ENST00000303553 NIM1KQ8IY84 436 aa21.31■■□□□ 1
NDUFA3-201ENST00000303553 WDR90Q96KV7 1748 aa21.31■■□□□ 1
NDUFA3-201ENST00000303553 FOXO4P98177 505 aa21.3■■□□□ 1
NDUFA3-201ENST00000303553 IFIT5Q13325 482 aaKnown RBP21.3■■□□□ 1
NDUFA3-201ENST00000303553 EYA3Q99504 573 aa21.3■■□□□ 1
NDUFA3-201ENST00000303553 BSDC1Q9NW68 430 aaPredicted RBP21.3■■□□□ 1
NDUFA3-201ENST00000303553 PODXL2Q9NZ53 605 aa21.3■■□□□ 1
NDUFA3-201ENST00000303553 ANKIB1Q9P2G1 1089 aa21.3■■□□□ 1
NDUFA3-201ENST00000303553 HDAC5Q9UQL6 1122 aa21.3■■□□□ 1
NDUFA3-201ENST00000303553 CHMP3Q9Y3E7 222 aa21.3■■□□□ 1
NDUFA3-201ENST00000303553 NBPF7P0C2Y1 421 aaPredicted RBP21.29■■□□□ 1
NDUFA3-201ENST00000303553 EIF6P56537 245 aaKnown RBP21.29■■□□□ 1
NDUFA3-201ENST00000303553 KIAA2012Q0VF49 1180 aa21.29■■□□□ 1
NDUFA3-201ENST00000303553 AOC3Q16853 763 aa21.29■■□□□ 1
NDUFA3-201ENST00000303553 SLC51AQ86UW1 340 aa21.29■■□□□ 1
NDUFA3-201ENST00000303553 MPHOSPH8Q99549 860 aa21.29■■□□□ 1
NDUFA3-201ENST00000303553 XDHP47989 1333 aa21.29■■□□□ 1
NDUFA3-201ENST00000303553 C6orf229H3BNL8 230 aa21.28■■□□□ 1
NDUFA3-201ENST00000303553 FZD9O00144 591 aa21.28■■□□□ 1
NDUFA3-201ENST00000303553 GPSM2P81274 684 aa21.28■■□□□ 1
NDUFA3-201ENST00000303553 CCDC57Q2TAC2 916 aa21.28■■□□□ 1
NDUFA3-201ENST00000303553 LMBR1LQ6UX01 489 aa21.28■■□□□ 1
NDUFA3-201ENST00000303553 ATF7IPQ6VMQ6 1270 aa21.28■■□□□ 1
NDUFA3-201ENST00000303553 FRAT1Q92837 279 aaPredicted RBP21.28■■□□□ 1
NDUFA3-201ENST00000303553 NMRK2Q9NPI5 230 aa21.28■■□□□ 1
NDUFA3-201ENST00000303553 BCAR3O75815 825 aa21.27■■□□□ 1
NDUFA3-201ENST00000303553 WASHC4Q2M389 1173 aa21.27■■□□□ 1
NDUFA3-201ENST00000303553 C16orf71Q8IYS4 520 aaPredicted RBP21.27■■□□□ 1
NDUFA3-201ENST00000303553 GGA1Q9UJY5 639 aa21.27■■□□□ 1
NDUFA3-201ENST00000303553 COL4A5P29400 1685 aa21.26■□□□□ 0.99
NDUFA3-201ENST00000303553 TAF7LQ5H9L4 462 aa21.26■□□□□ 0.99
NDUFA3-201ENST00000303553 ZKSCAN2Q63HK3 967 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms