RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 CLCN6P51797 869 aa12.79□□□□□ -0.36
ZNF558-201ENST00000301475 MAP4K1Q92918 833 aa12.79□□□□□ -0.36
ZNF558-201ENST00000301475 DDX11Q96FC9 970 aa12.79□□□□□ -0.36
ZNF558-201ENST00000301475 TRERF1Q96PN7 1200 aa12.79□□□□□ -0.36
ZNF558-201ENST00000301475 L2HGDHQ9H9P8 463 aa12.79□□□□□ -0.36
ZNF558-201ENST00000301475 PDIA4P13667 645 aaKnown RBP12.79□□□□□ -0.36
ZNF558-201ENST00000301475 SLC20A2Q08357 652 aa12.79□□□□□ -0.36
ZNF558-201ENST00000301475 IPO4Q8TEX9 1081 aaKnown RBP12.79□□□□□ -0.36
ZNF558-201ENST00000301475 RBM33Q96EV2 1170 aaKnown RBP12.79□□□□□ -0.36
ZNF558-201ENST00000301475 NMIQ13287 307 aaPredicted RBP12.78□□□□□ -0.36
ZNF558-201ENST00000301475 STX1AQ16623 288 aa12.78□□□□□ -0.36
ZNF558-201ENST00000301475 E4F1Q66K89 784 aaPredicted RBP12.78□□□□□ -0.36
ZNF558-201ENST00000301475 KCND1Q9NSA2 647 aa12.78□□□□□ -0.36
ZNF558-201ENST00000301475 HNRNPH2P55795 449 aaKnown RBP12.78□□□□□ -0.36
ZNF558-201ENST00000301475 FTOQ9C0B1 505 aaKnown RBP eCLIP12.78□□□□□ -0.36
ZNF558-201ENST00000301475 GOLPH3LQ9H4A5 285 aa12.78□□□□□ -0.36
ZNF558-201ENST00000301475 ECHDC1Q9NTX5 307 aa12.78□□□□□ -0.36
ZNF558-201ENST00000301475 PNMA6AP0CW24 399 aaPredicted RBP12.78□□□□□ -0.36
ZNF558-201ENST00000301475 RPS6KB1P23443 525 aa12.78□□□□□ -0.36
ZNF558-201ENST00000301475 PLA2G4AP47712 749 aa12.78□□□□□ -0.36
ZNF558-201ENST00000301475 FAM193AP78312 1265 aa12.78□□□□□ -0.36
ZNF558-201ENST00000301475 CEBPZQ03701 1054 aaKnown RBP12.78□□□□□ -0.36
ZNF558-201ENST00000301475 OS9Q13438 667 aaPredicted RBP12.78□□□□□ -0.36
ZNF558-201ENST00000301475 BMS1Q14692 1282 aaKnown RBP12.78□□□□□ -0.36
ZNF558-201ENST00000301475 HDGFL1Q5TGJ6 251 aa12.78□□□□□ -0.36
ZNF558-201ENST00000301475 BLOC1S2Q6QNY1 142 aa12.78□□□□□ -0.36
ZNF558-201ENST00000301475 NBPF11Q86T75 865 aa12.78□□□□□ -0.36
ZNF558-201ENST00000301475 CREBRFQ8IUR6 639 aa12.78□□□□□ -0.36
ZNF558-201ENST00000301475 BRF1Q92994 677 aa12.78□□□□□ -0.36
ZNF558-201ENST00000301475 USP31Q70CQ4 1352 aa12.77□□□□□ -0.36
ZNF558-201ENST00000301475 GIGYF1O75420 1035 aaPredicted RBP12.77□□□□□ -0.36
ZNF558-201ENST00000301475 SNW1Q13573 536 aaKnown RBP12.77□□□□□ -0.36
ZNF558-201ENST00000301475 A0A0D9SFI3 127 aa12.77□□□□□ -0.37
ZNF558-201ENST00000301475 BECN2A8MW95 431 aa12.77□□□□□ -0.37
ZNF558-201ENST00000301475 CCDC93Q567U6 631 aa12.77□□□□□ -0.37
ZNF558-201ENST00000301475 ERCC4Q92889 916 aaPredicted RBP12.77□□□□□ -0.37
ZNF558-201ENST00000301475 PPP1R13BQ96KQ4 1090 aa12.77□□□□□ -0.37
ZNF558-201ENST00000301475 EYA1Q99502 592 aa12.77□□□□□ -0.37
ZNF558-201ENST00000301475 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.77□□□□□ -0.37
ZNF558-201ENST00000301475 MYH15Q9Y2K3 1946 aa12.76□□□□□ -0.37
ZNF558-201ENST00000301475 PSMA5P28066 241 aa12.76□□□□□ -0.37
ZNF558-201ENST00000301475 SYT10Q6XYQ8 523 aa12.76□□□□□ -0.37
ZNF558-201ENST00000301475 CLASRPQ8N2M8 674 aaKnown RBP12.76□□□□□ -0.37
ZNF558-201ENST00000301475 ACEP12821 1306 aa12.76□□□□□ -0.37
ZNF558-201ENST00000301475 IGSF1Q8N6C5 1336 aa12.76□□□□□ -0.37
ZNF558-201ENST00000301475 IFIT2P09913 472 aaKnown RBP12.76□□□□□ -0.37
ZNF558-201ENST00000301475 RNF20Q5VTR2 975 aa12.76□□□□□ -0.37
ZNF558-201ENST00000301475 PLCD3Q8N3E9 789 aa12.76□□□□□ -0.37
ZNF558-201ENST00000301475 AOPEPQ8N6M6 819 aa12.76□□□□□ -0.37
ZNF558-201ENST00000301475 IL17REQ8NFR9 667 aa12.76□□□□□ -0.37
ZNF558-201ENST00000301475 EVI5LQ96CN4 794 aa12.76□□□□□ -0.37
ZNF558-201ENST00000301475 DNAJC2Q99543 621 aaKnown RBP12.76□□□□□ -0.37
ZNF558-201ENST00000301475 PA2G4Q9UQ80 394 aaKnown RBP12.76□□□□□ -0.37
ZNF558-201ENST00000301475 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.76□□□□□ -0.37
ZNF558-201ENST00000301475 BEND3Q5T5X7 828 aa12.75□□□□□ -0.37
ZNF558-201ENST00000301475 USP6P35125 1406 aa12.75□□□□□ -0.37
ZNF558-201ENST00000301475 KIF2AO00139 706 aaPredicted RBP12.75□□□□□ -0.37
ZNF558-201ENST00000301475 ADD1P35611 737 aaKnown RBP12.75□□□□□ -0.37
ZNF558-201ENST00000301475 ANKRD1Q15327 319 aa12.75□□□□□ -0.37
ZNF558-201ENST00000301475 ARHGAP29Q52LW3 1261 aa12.75□□□□□ -0.37
ZNF558-201ENST00000301475 HSP90AB4PQ58FF6 505 aa12.75□□□□□ -0.37
ZNF558-201ENST00000301475 THEMISQ8N1K5 641 aaPredicted RBP12.75□□□□□ -0.37
ZNF558-201ENST00000301475 FBXW7Q969H0 707 aa12.75□□□□□ -0.37
ZNF558-201ENST00000301475 OSBPL5Q9H0X9 879 aaPredicted RBP12.75□□□□□ -0.37
ZNF558-201ENST00000301475 ZRANB2O95218 330 aaKnown RBP eCLIP12.75□□□□□ -0.37
ZNF558-201ENST00000301475 RAD51AP2Q09MP3 1159 aa12.75□□□□□ -0.37
ZNF558-201ENST00000301475 TAF7Q15545 349 aaPredicted RBP12.75□□□□□ -0.37
ZNF558-201ENST00000301475 CCAR1Q8IX12 1150 aaKnown RBP12.75□□□□□ -0.37
ZNF558-201ENST00000301475 NEK11Q8NG66 645 aa12.75□□□□□ -0.37
ZNF558-201ENST00000301475 GNAT3A8MTJ3 354 aa12.74□□□□□ -0.37
ZNF558-201ENST00000301475 ARMCX5Q6P1M9 558 aa12.74□□□□□ -0.37
ZNF558-201ENST00000301475 ZNF589Q86UQ0 364 aaPredicted RBP12.74□□□□□ -0.37
ZNF558-201ENST00000301475 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.74□□□□□ -0.37
ZNF558-201ENST00000301475 MED23Q9ULK4 1368 aa12.74□□□□□ -0.37
ZNF558-201ENST00000301475 PI4KAP2A4QPH2 592 aa12.74□□□□□ -0.37
ZNF558-201ENST00000301475 PI4KAP1Q8N8J0 262 aa12.74□□□□□ -0.37
ZNF558-201ENST00000301475 SNRKQ9NRH2 765 aa12.74□□□□□ -0.37
ZNF558-201ENST00000301475 AMOTL2Q9Y2J4 779 aa12.74□□□□□ -0.37
ZNF558-201ENST00000301475 FLT4P35916 1363 aa12.74□□□□□ -0.37
ZNF558-201ENST00000301475 ROBO2Q9HCK4 1378 aa12.74□□□□□ -0.37
ZNF558-201ENST00000301475 TOPAZ1Q8N9V7 1692 aa12.74□□□□□ -0.37
ZNF558-201ENST00000301475 GSDMDP57764 484 aa12.73□□□□□ -0.37
ZNF558-201ENST00000301475 AACSQ86V21 672 aa12.73□□□□□ -0.37
ZNF558-201ENST00000301475 TRIM34Q9BYJ4 488 aa12.73□□□□□ -0.37
ZNF558-201ENST00000301475 ALDH8A1Q9H2A2 487 aaPredicted RBP12.73□□□□□ -0.37
ZNF558-201ENST00000301475 FEZ2Q9UHY8 353 aaPredicted RBP12.73□□□□□ -0.37
ZNF558-201ENST00000301475 CTAGE5O15320 804 aa12.73□□□□□ -0.37
ZNF558-201ENST00000301475 EIF2S2P20042 333 aaKnown RBP12.73□□□□□ -0.37
ZNF558-201ENST00000301475 FOSBP53539 338 aa12.73□□□□□ -0.37
ZNF558-201ENST00000301475 NFATC2IPQ8NCF5 419 aa12.73□□□□□ -0.37
ZNF558-201ENST00000301475 DNAAF4Q8WXU2 420 aa12.73□□□□□ -0.37
ZNF558-201ENST00000301475 TECPR2O15040 1411 aa12.73□□□□□ -0.37
ZNF558-201ENST00000301475 SBNO1A3KN83 1393 aa12.73□□□□□ -0.37
ZNF558-201ENST00000301475 H3BQV1 296 aa12.72□□□□□ -0.37
ZNF558-201ENST00000301475 FANCGO15287 622 aa12.72□□□□□ -0.37
ZNF558-201ENST00000301475 HTATSF1O43719 755 aaKnown RBP12.72□□□□□ -0.37
ZNF558-201ENST00000301475 ANXA1P04083 346 aa12.72□□□□□ -0.37
ZNF558-201ENST00000301475 MTX1Q13505 466 aa12.72□□□□□ -0.37
ZNF558-201ENST00000301475 IFFO2Q5TF58 517 aa12.72□□□□□ -0.37
ZNF558-201ENST00000301475 ENGASEQ8NFI3 743 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms