RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 FSIP1Q8NA03 581 aa17.2■□□□□ 0.34
COL6A2-201ENST00000300527 ERO1AQ96HE7 468 aa17.2■□□□□ 0.34
COL6A2-201ENST00000300527 TM6SF1Q9BZW5 370 aa17.2■□□□□ 0.34
COL6A2-201ENST00000300527 ESF1Q9H501 851 aaKnown RBP17.2■□□□□ 0.34
COL6A2-201ENST00000300527 ELP1O95163 1332 aa17.2■□□□□ 0.34
COL6A2-201ENST00000300527 TOB2Q14106 344 aaPredicted RBP17.2■□□□□ 0.34
COL6A2-201ENST00000300527 CCAR2Q8N163 923 aaKnown RBP17.2■□□□□ 0.34
COL6A2-201ENST00000300527 IL17RAQ96F46 866 aa17.2■□□□□ 0.34
COL6A2-201ENST00000300527 DNAJC2Q99543 621 aaKnown RBP17.2■□□□□ 0.34
COL6A2-201ENST00000300527 EPB41L2O43491 1005 aaKnown RBP17.19■□□□□ 0.34
COL6A2-201ENST00000300527 ARHGAP29Q52LW3 1261 aa17.19■□□□□ 0.34
COL6A2-201ENST00000300527 Q6ZUG5 572 aa17.19■□□□□ 0.34
COL6A2-201ENST00000300527 ANKRD1Q15327 319 aa17.19■□□□□ 0.34
COL6A2-201ENST00000300527 TTC41PQ6P2S7 1318 aa17.19■□□□□ 0.34
COL6A2-201ENST00000300527 GNL2Q13823 731 aaKnown RBP17.19■□□□□ 0.34
COL6A2-201ENST00000300527 SYCP1Q15431 976 aa17.18■□□□□ 0.34
COL6A2-201ENST00000300527 SF3A1Q15459 793 aaKnown RBP17.18■□□□□ 0.34
COL6A2-201ENST00000300527 CEP57L1Q8IYX8 460 aa17.18■□□□□ 0.34
COL6A2-201ENST00000300527 EAF2Q96CJ1 260 aaPredicted RBP17.18■□□□□ 0.34
COL6A2-201ENST00000300527 MAP3K2Q9Y2U5 619 aa17.18■□□□□ 0.34
COL6A2-201ENST00000300527 TEFQ10587 303 aa17.18■□□□□ 0.34
COL6A2-201ENST00000300527 IQCB1Q15051 598 aa17.18■□□□□ 0.34
COL6A2-201ENST00000300527 SLC26A8Q96RN1 970 aa17.18■□□□□ 0.34
COL6A2-201ENST00000300527 CHMP4AQ9BY43 222 aa17.18■□□□□ 0.34
COL6A2-201ENST00000300527 GOLPH3LQ9H4A5 285 aa17.18■□□□□ 0.34
COL6A2-201ENST00000300527 LGR6Q9HBX8 967 aa17.18■□□□□ 0.34
COL6A2-201ENST00000300527 BEND3Q5T5X7 828 aa17.17■□□□□ 0.34
COL6A2-201ENST00000300527 MAP4K1Q92918 833 aa17.17■□□□□ 0.34
COL6A2-201ENST00000300527 SEC62Q99442 399 aaKnown RBP17.17■□□□□ 0.34
COL6A2-201ENST00000300527 DNAI1Q9UI46 699 aa17.17■□□□□ 0.34
COL6A2-201ENST00000300527 CFAP45Q9UL16 551 aa17.17■□□□□ 0.34
COL6A2-201ENST00000300527 CHST3Q7LGC8 479 aa17.17■□□□□ 0.34
COL6A2-201ENST00000300527 NCOA5Q9HCD5 579 aaKnown RBP17.17■□□□□ 0.34
COL6A2-201ENST00000300527 IFNKQ9P0W0 207 aa17.17■□□□□ 0.34
COL6A2-201ENST00000300527 CCZ1BP86790 482 aa17.17■□□□□ 0.34
COL6A2-201ENST00000300527 CCZ1P86791 482 aaPredicted RBP17.17■□□□□ 0.34
COL6A2-201ENST00000300527 MNS1Q8NEH6 495 aa17.17■□□□□ 0.34
COL6A2-201ENST00000300527 NEK11Q8NG66 645 aa17.17■□□□□ 0.34
COL6A2-201ENST00000300527 A0A1B0GVL5 298 aa17.16■□□□□ 0.34
COL6A2-201ENST00000300527 EPC1Q9H2F5 836 aa17.16■□□□□ 0.34
COL6A2-201ENST00000300527 ZNF446Q9NWS9 450 aa17.16■□□□□ 0.34
COL6A2-201ENST00000300527 URI1O94763 535 aaPredicted RBP17.16■□□□□ 0.34
COL6A2-201ENST00000300527 PDE4CQ08493 712 aa17.16■□□□□ 0.34
COL6A2-201ENST00000300527 RAB11FIP4Q86YS3 637 aa17.16■□□□□ 0.34
COL6A2-201ENST00000300527 USP28Q96RU2 1077 aa17.16■□□□□ 0.34
COL6A2-201ENST00000300527 ANO10Q9NW15 660 aa17.16■□□□□ 0.34
COL6A2-201ENST00000300527 GOLGA8FQ08AF8 430 aa17.15■□□□□ 0.34
COL6A2-201ENST00000300527 GOLGA8DPQ0D2H9 430 aa17.15■□□□□ 0.34
COL6A2-201ENST00000300527 RESTQ13127 1097 aa17.15■□□□□ 0.34
COL6A2-201ENST00000300527 OTUD7BQ6GQQ9 843 aa17.15■□□□□ 0.34
COL6A2-201ENST00000300527 MAP3K5Q99683 1374 aa17.15■□□□□ 0.34
COL6A2-201ENST00000300527 SEC31AO94979 1220 aaKnown RBP17.15■□□□□ 0.34
COL6A2-201ENST00000300527 SFPQP23246 707 aaKnown RBP eCLIP17.15■□□□□ 0.34
COL6A2-201ENST00000300527 BMS1Q14692 1282 aaKnown RBP17.15■□□□□ 0.34
COL6A2-201ENST00000300527 HSP90AA4PQ58FG1 418 aa17.15■□□□□ 0.34
COL6A2-201ENST00000300527 NEK1Q96PY6 1258 aa17.15■□□□□ 0.34
COL6A2-201ENST00000300527 MPRIPQ6WCQ1 1025 aa17.15■□□□□ 0.34
COL6A2-201ENST00000300527 NYAP1Q6ZVC0 841 aa17.15■□□□□ 0.34
COL6A2-201ENST00000300527 UBXN4Q92575 508 aa17.15■□□□□ 0.34
COL6A2-201ENST00000300527 NEMFO60524 1076 aa17.14■□□□□ 0.33
COL6A2-201ENST00000300527 CLCN6P51797 869 aa17.14■□□□□ 0.33
COL6A2-201ENST00000300527 MRFAP1L1Q96HT8 127 aa17.14■□□□□ 0.33
COL6A2-201ENST00000300527 CALCOCO1Q9P1Z2 691 aa17.14■□□□□ 0.33
COL6A2-201ENST00000300527 LMOD1P29536 600 aaPredicted RBP17.14■□□□□ 0.33
COL6A2-201ENST00000300527 APOBRQ0VD83 1088 aa17.14■□□□□ 0.33
COL6A2-201ENST00000300527 PROSER3Q2NL68 480 aa17.14■□□□□ 0.33
COL6A2-201ENST00000300527 XPO4Q9C0E2 1151 aaKnown RBP17.14■□□□□ 0.33
COL6A2-201ENST00000300527 NRDCO43847 1150 aa17.13■□□□□ 0.33
COL6A2-201ENST00000300527 SLFNL1Q499Z3 407 aa17.13■□□□□ 0.33
COL6A2-201ENST00000300527 CCDC34Q96HJ3 373 aa17.13■□□□□ 0.33
COL6A2-201ENST00000300527 POLR3DP05423 398 aaPredicted RBP17.13■□□□□ 0.33
COL6A2-201ENST00000300527 TRIM34Q9BYJ4 488 aa17.13■□□□□ 0.33
COL6A2-201ENST00000300527 RIMS1Q86UR5 1692 aaKnown RBP17.13■□□□□ 0.33
COL6A2-201ENST00000300527 DHX40Q8IX18 779 aaKnown RBP17.13■□□□□ 0.33
COL6A2-201ENST00000300527 ZCCHC17Q9NP64 241 aaKnown RBP17.13■□□□□ 0.33
COL6A2-201ENST00000300527 PRAMEF22A3QJZ6 481 aa17.12■□□□□ 0.33
COL6A2-201ENST00000300527 HNRNPH2P55795 449 aaKnown RBP17.12■□□□□ 0.33
COL6A2-201ENST00000300527 TMCO3Q6UWJ1 677 aa17.12■□□□□ 0.33
COL6A2-201ENST00000300527 BICC1Q9H694 974 aaKnown RBP17.12■□□□□ 0.33
COL6A2-201ENST00000300527 FLT4P35916 1363 aa17.12■□□□□ 0.33
COL6A2-201ENST00000300527 SASH1O94885 1247 aa17.12■□□□□ 0.33
COL6A2-201ENST00000300527 ERC1Q8IUD2 1116 aa17.12■□□□□ 0.33
COL6A2-201ENST00000300527 PPP1R13BQ96KQ4 1090 aa17.12■□□□□ 0.33
COL6A2-201ENST00000300527 HIP1O00291 1037 aa17.12■□□□□ 0.33
COL6A2-201ENST00000300527 SCRN1Q12765 414 aa17.12■□□□□ 0.33
COL6A2-201ENST00000300527 DPCR1Q3MIW9 517 aa17.12■□□□□ 0.33
COL6A2-201ENST00000300527 DDX46Q7L014 1031 aaKnown RBP17.12■□□□□ 0.33
COL6A2-201ENST00000300527 SUCLG2Q96I99 432 aa17.12■□□□□ 0.33
COL6A2-201ENST00000300527 NAT10Q9H0A0 1025 aaKnown RBP17.12■□□□□ 0.33
COL6A2-201ENST00000300527 CLTCQ00610 1675 aaKnown RBP17.11■□□□□ 0.33
COL6A2-201ENST00000300527 ARHGEF10O15013 1369 aa17.11■□□□□ 0.33
COL6A2-201ENST00000300527 BTBD11A6QL63 1104 aa17.11■□□□□ 0.33
COL6A2-201ENST00000300527 E4F1Q66K89 784 aaPredicted RBP17.11■□□□□ 0.33
COL6A2-201ENST00000300527 PTPDC1A2A3K4 754 aa17.11■□□□□ 0.33
COL6A2-201ENST00000300527 CDC25BP30305 580 aa17.11■□□□□ 0.33
COL6A2-201ENST00000300527 RBM43Q6ZSC3 357 aaKnown RBP17.11■□□□□ 0.33
COL6A2-201ENST00000300527 TMEM131LA2VDJ0 1609 aa17.11■□□□□ 0.33
COL6A2-201ENST00000300527 TNNT3P45378 269 aaPredicted RBP17.11■□□□□ 0.33
COL6A2-201ENST00000300527 ZSWIM4Q9H7M6 989 aa17.11■□□□□ 0.33
COL6A2-201ENST00000300527 STK38Q15208 465 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms