RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 ATP2B2Q01814 1243 aa18.93■□□□□ 0.62
SNAPC4-201ENST00000298532 CKAP4Q07065 602 aaKnown RBP18.93■□□□□ 0.62
SNAPC4-201ENST00000298532 MCM6Q14566 821 aa18.93■□□□□ 0.62
SNAPC4-201ENST00000298532 TDRD12Q587J7 1177 aaKnown RBP18.93■□□□□ 0.62
SNAPC4-201ENST00000298532 POLR3DP05423 398 aaPredicted RBP18.93■□□□□ 0.62
SNAPC4-201ENST00000298532 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.93■□□□□ 0.62
SNAPC4-201ENST00000298532 RSPH14Q9UHP6 348 aa18.93■□□□□ 0.62
SNAPC4-201ENST00000298532 V9GYY5 206 aaPredicted RBP18.93■□□□□ 0.62
SNAPC4-201ENST00000298532 PTGS1P23219 599 aa18.93■□□□□ 0.62
SNAPC4-201ENST00000298532 METTL24Q5JXM2 366 aa18.93■□□□□ 0.62
SNAPC4-201ENST00000298532 TICAM2Q86XR7 235 aa18.93■□□□□ 0.62
SNAPC4-201ENST00000298532 MRPS27Q92552 414 aaKnown RBP18.93■□□□□ 0.62
SNAPC4-201ENST00000298532 PPIP5K1Q6PFW1 1433 aa18.93■□□□□ 0.62
SNAPC4-201ENST00000298532 KCNG4Q8TDN1 519 aa18.93■□□□□ 0.62
SNAPC4-201ENST00000298532 ABCA8O94911 1581 aa18.92■□□□□ 0.62
SNAPC4-201ENST00000298532 GOLGA6L10A0A0M3HER8 536 aa18.92■□□□□ 0.62
SNAPC4-201ENST00000298532 SYKP43405 635 aa18.92■□□□□ 0.62
SNAPC4-201ENST00000298532 ISM2Q6H9L7 571 aa18.92■□□□□ 0.62
SNAPC4-201ENST00000298532 DBF4Q9UBU7 674 aaPredicted RBP18.92■□□□□ 0.62
SNAPC4-201ENST00000298532 DNMT1P26358 1616 aaKnown RBP18.92■□□□□ 0.62
SNAPC4-201ENST00000298532 LIG1P18858 919 aa18.92■□□□□ 0.62
SNAPC4-201ENST00000298532 RHPN1Q8TCX5 695 aa18.92■□□□□ 0.62
SNAPC4-201ENST00000298532 IARSP41252 1262 aaKnown RBP18.92■□□□□ 0.62
SNAPC4-201ENST00000298532 CETN2P41208 172 aa18.92■□□□□ 0.62
SNAPC4-201ENST00000298532 DNA2P51530 1060 aa18.92■□□□□ 0.62
SNAPC4-201ENST00000298532 MPRIPQ6WCQ1 1025 aa18.92■□□□□ 0.62
SNAPC4-201ENST00000298532 AOPEPQ8N6M6 819 aa18.92■□□□□ 0.62
SNAPC4-201ENST00000298532 PYM1Q9BRP8 204 aaKnown RBP18.92■□□□□ 0.62
SNAPC4-201ENST00000298532 KIF20AO95235 890 aa18.91■□□□□ 0.62
SNAPC4-201ENST00000298532 CCDC91Q7Z6B0 441 aa18.91■□□□□ 0.62
SNAPC4-201ENST00000298532 CTCFLQ8NI51 663 aaPredicted RBP18.91■□□□□ 0.62
SNAPC4-201ENST00000298532 JADE2Q9NQC1 790 aa18.91■□□□□ 0.62
SNAPC4-201ENST00000298532 MTIF2P46199 727 aaKnown RBP18.91■□□□□ 0.62
SNAPC4-201ENST00000298532 TUBB4BP68371 445 aa18.91■□□□□ 0.62
SNAPC4-201ENST00000298532 ASXL1Q8IXJ9 1541 aa18.91■□□□□ 0.62
SNAPC4-201ENST00000298532 ZGPATQ8N5A5 531 aaKnown RBP18.91■□□□□ 0.62
SNAPC4-201ENST00000298532 CEP112Q8N8E3 955 aa18.91■□□□□ 0.62
SNAPC4-201ENST00000298532 ZFP91Q96JP5 570 aaPredicted RBP18.91■□□□□ 0.62
SNAPC4-201ENST00000298532 MYD88Q99836 296 aa18.91■□□□□ 0.62
SNAPC4-201ENST00000298532 RBSNQ9H1K0 784 aa18.91■□□□□ 0.62
SNAPC4-201ENST00000298532 CAPN2P17655 700 aa18.91■□□□□ 0.62
SNAPC4-201ENST00000298532 GOLGA1Q92805 767 aa18.91■□□□□ 0.62
SNAPC4-201ENST00000298532 MEIS3Q99687 375 aa18.91■□□□□ 0.62
SNAPC4-201ENST00000298532 SYT1P21579 422 aa18.9■□□□□ 0.62
SNAPC4-201ENST00000298532 MAATS1Q7Z4T9 603 aa18.9■□□□□ 0.62
SNAPC4-201ENST00000298532 C8orf37Q96NL8 207 aa18.9■□□□□ 0.62
SNAPC4-201ENST00000298532 IFIT3O14879 490 aaKnown RBP18.9■□□□□ 0.62
SNAPC4-201ENST00000298532 HSF2BPO75031 334 aa18.9■□□□□ 0.62
SNAPC4-201ENST00000298532 RLBP1P12271 317 aa18.9■□□□□ 0.62
SNAPC4-201ENST00000298532 SPECC1LQ69YQ0 1117 aa18.9■□□□□ 0.62
SNAPC4-201ENST00000298532 BRF1Q92994 677 aa18.9■□□□□ 0.62
SNAPC4-201ENST00000298532 N4BP3O15049 544 aa18.9■□□□□ 0.62
SNAPC4-201ENST00000298532 PTCD1O75127 700 aaKnown RBP18.9■□□□□ 0.62
SNAPC4-201ENST00000298532 CCDC82Q8N4S0 544 aa18.9■□□□□ 0.62
SNAPC4-201ENST00000298532 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.9■□□□□ 0.62
SNAPC4-201ENST00000298532 PTPRKQ15262 1439 aa18.89■□□□□ 0.61
SNAPC4-201ENST00000298532 GIGYF2Q6Y7W6 1299 aaKnown RBP18.89■□□□□ 0.61
SNAPC4-201ENST00000298532 GOPCQ9HD26 462 aa18.89■□□□□ 0.61
SNAPC4-201ENST00000298532 SPINK5Q9NQ38 1064 aaPredicted RBP18.89■□□□□ 0.61
SNAPC4-201ENST00000298532 HYPKQ9NX55 129 aa18.89■□□□□ 0.61
SNAPC4-201ENST00000298532 ZCRB1Q8TBF4 217 aaKnown RBP18.89■□□□□ 0.61
SNAPC4-201ENST00000298532 RNF41Q9H4P4 317 aaPredicted RBP18.89■□□□□ 0.61
SNAPC4-201ENST00000298532 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.89■□□□□ 0.612e-6■■■■□ 21.2
SNAPC4-201ENST00000298532 PIK3R4Q99570 1358 aa18.89■□□□□ 0.61
SNAPC4-201ENST00000298532 IGSF3O75054 1194 aa18.89■□□□□ 0.61
SNAPC4-201ENST00000298532 CCDC85AQ96PX6 553 aaPredicted RBP18.89■□□□□ 0.61
SNAPC4-201ENST00000298532 CTAGE1Q96RT6 745 aa18.89■□□□□ 0.61
SNAPC4-201ENST00000298532 TMEM132AQ24JP5 1023 aa18.89■□□□□ 0.61
SNAPC4-201ENST00000298532 MAST1Q9Y2H9 1570 aa18.88■□□□□ 0.61
SNAPC4-201ENST00000298532 CHD1O14646 1710 aa18.88■□□□□ 0.61
SNAPC4-201ENST00000298532 FAM114A1Q8IWE2 563 aa18.88■□□□□ 0.61
SNAPC4-201ENST00000298532 TMEM2Q9UHN6 1383 aa18.88■□□□□ 0.61
SNAPC4-201ENST00000298532 MRPL50Q8N5N7 158 aaKnown RBP18.88■□□□□ 0.61
SNAPC4-201ENST00000298532 RAB34Q9BZG1 259 aa18.88■□□□□ 0.61
SNAPC4-201ENST00000298532 MINDY4BA8MYZ0 360 aa18.88■□□□□ 0.61
SNAPC4-201ENST00000298532 DDB1Q16531 1140 aa18.88■□□□□ 0.61
SNAPC4-201ENST00000298532 DCTPP1Q9H773 170 aa18.88■□□□□ 0.61
SNAPC4-201ENST00000298532 IQCA1Q86XH1 822 aa18.88■□□□□ 0.61
SNAPC4-201ENST00000298532 RBM8AQ9Y5S9 174 aaKnown RBP18.88■□□□□ 0.61
SNAPC4-201ENST00000298532 ZNF445P59923 1031 aa18.87■□□□□ 0.61
SNAPC4-201ENST00000298532 TAOK3Q9H2K8 898 aa18.87■□□□□ 0.61
SNAPC4-201ENST00000298532 ZBTB40Q9NUA8 1239 aa18.87■□□□□ 0.61
SNAPC4-201ENST00000298532 ABCF2Q9UG63 623 aa18.87■□□□□ 0.61
SNAPC4-201ENST00000298532 PRAG1Q86YV5 1406 aa18.87■□□□□ 0.61
SNAPC4-201ENST00000298532 YTHDC2Q9H6S0 1430 aaKnown RBP18.87■□□□□ 0.61
SNAPC4-201ENST00000298532 MAP3K12Q12852 859 aa18.87■□□□□ 0.61
SNAPC4-201ENST00000298532 GSTTP1A0A1W2PQM5 241 aa18.86■□□□□ 0.61
SNAPC4-201ENST00000298532 HSPA4P34932 840 aa18.86■□□□□ 0.61
SNAPC4-201ENST00000298532 SPAG1Q07617 926 aa18.86■□□□□ 0.61
SNAPC4-201ENST00000298532 MYRIPQ8NFW9 859 aa18.86■□□□□ 0.61
SNAPC4-201ENST00000298532 TNNQ9UQP3 1299 aa18.86■□□□□ 0.61
SNAPC4-201ENST00000298532 KDM2BQ8NHM5 1336 aa18.86■□□□□ 0.61
SNAPC4-201ENST00000298532 CHRNA2Q15822 529 aa18.86■□□□□ 0.61
SNAPC4-201ENST00000298532 ERO1AQ96HE7 468 aa18.86■□□□□ 0.61
SNAPC4-201ENST00000298532 POLR3AO14802 1390 aaPredicted RBP18.86■□□□□ 0.61
SNAPC4-201ENST00000298532 CCDC194A0A1B0GVG4 234 aa18.86■□□□□ 0.61
SNAPC4-201ENST00000298532 MATR3P43243 847 aaKnown RBP eCLIP18.86■□□□□ 0.61
SNAPC4-201ENST00000298532 TUBBP07437 444 aa18.86■□□□□ 0.61
SNAPC4-201ENST00000298532 NF2P35240 595 aa18.86■□□□□ 0.61
SNAPC4-201ENST00000298532 METAP2P50579 478 aaKnown RBP eCLIP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms