RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 EDC3Q96F86 508 aaKnown RBP16.5■□□□□ 0.23
CHMP4C-201ENST00000297265 RAD50Q92878 1312 aa16.5■□□□□ 0.23
CHMP4C-201ENST00000297265 SMARCC1Q92922 1105 aaPredicted RBP16.5■□□□□ 0.23
CHMP4C-201ENST00000297265 SNRKQ9NRH2 765 aa16.5■□□□□ 0.23
CHMP4C-201ENST00000297265 CAMTA2O94983 1202 aa16.49■□□□□ 0.23
CHMP4C-201ENST00000297265 HSPA1LP34931 641 aa16.49■□□□□ 0.23
CHMP4C-201ENST00000297265 CHMP5Q9NZZ3 219 aa16.49■□□□□ 0.23
CHMP4C-201ENST00000297265 MYH3P11055 1940 aa16.49■□□□□ 0.23
CHMP4C-201ENST00000297265 PTH1RQ03431 593 aa16.48■□□□□ 0.23
CHMP4C-201ENST00000297265 CCDC57Q2TAC2 916 aa16.48■□□□□ 0.23
CHMP4C-201ENST00000297265 FAM227BQ96M60 508 aa16.48■□□□□ 0.23
CHMP4C-201ENST00000297265 CCDC85AQ96PX6 553 aaPredicted RBP16.48■□□□□ 0.23
CHMP4C-201ENST00000297265 FBXO3Q9UK99 471 aa16.48■□□□□ 0.23
CHMP4C-201ENST00000297265 NDUFB9Q9Y6M9 179 aa16.48■□□□□ 0.23
CHMP4C-201ENST00000297265 DIAPH3Q9NSV4 1193 aa16.48■□□□□ 0.23
CHMP4C-201ENST00000297265 TRMT112Q9UI30 125 aaKnown RBP16.48■□□□□ 0.23
CHMP4C-201ENST00000297265 ZNF609O15014 1411 aa16.47■□□□□ 0.23
CHMP4C-201ENST00000297265 IRS4O14654 1257 aaPredicted RBP16.47■□□□□ 0.23
CHMP4C-201ENST00000297265 KCNQ4P56696 695 aa16.47■□□□□ 0.23
CHMP4C-201ENST00000297265 NMIQ13287 307 aaPredicted RBP16.47■□□□□ 0.23
CHMP4C-201ENST00000297265 SUSD4Q5VX71 490 aa16.47■□□□□ 0.23
CHMP4C-201ENST00000297265 RASEFQ8IZ41 740 aa16.47■□□□□ 0.23
CHMP4C-201ENST00000297265 LINC00116Q8NCU8 138 aa16.47■□□□□ 0.23
CHMP4C-201ENST00000297265 HAUS7Q99871 368 aa16.47■□□□□ 0.23
CHMP4C-201ENST00000297265 GREM2Q9H772 168 aa16.47■□□□□ 0.23
CHMP4C-201ENST00000297265 CTSWP56202 376 aa16.46■□□□□ 0.23
CHMP4C-201ENST00000297265 RIPOR2Q9Y4F9 1068 aa16.46■□□□□ 0.23
CHMP4C-201ENST00000297265 A0A0D9SFI3 127 aa16.46■□□□□ 0.22
CHMP4C-201ENST00000297265 A0A1B0GUL7 405 aa16.46■□□□□ 0.22
CHMP4C-201ENST00000297265 ONECUT3O60422 494 aaPredicted RBP16.46■□□□□ 0.22
CHMP4C-201ENST00000297265 MCCP23508 829 aa16.46■□□□□ 0.22
CHMP4C-201ENST00000297265 NEK4P51957 841 aa16.46■□□□□ 0.22
CHMP4C-201ENST00000297265 IFIT5Q13325 482 aaKnown RBP16.46■□□□□ 0.22
CHMP4C-201ENST00000297265 FAM182BQ5T319 152 aa16.46■□□□□ 0.22
CHMP4C-201ENST00000297265 RUFY2Q8WXA3 655 aa16.46■□□□□ 0.22
CHMP4C-201ENST00000297265 GJD4Q96KN9 370 aaPredicted RBP16.46■□□□□ 0.22
CHMP4C-201ENST00000297265 FOXD4L1Q9NU39 408 aa16.46■□□□□ 0.22
CHMP4C-201ENST00000297265 SNX14Q9Y5W7 946 aa16.46■□□□□ 0.22
CHMP4C-201ENST00000297265 ST18O60284 1047 aa16.45■□□□□ 0.22
CHMP4C-201ENST00000297265 PDE8AO60658 829 aa16.45■□□□□ 0.22
CHMP4C-201ENST00000297265 CHGBP05060 677 aa16.45■□□□□ 0.22
CHMP4C-201ENST00000297265 ITGA6P23229 1130 aa16.45■□□□□ 0.22
CHMP4C-201ENST00000297265 KCNB2Q92953 911 aa16.45■□□□□ 0.22
CHMP4C-201ENST00000297265 NEUROD6Q96NK8 337 aa16.45■□□□□ 0.22
CHMP4C-201ENST00000297265 HIP1O00291 1037 aa16.44■□□□□ 0.22
CHMP4C-201ENST00000297265 NECTIN1Q15223 517 aa16.44■□□□□ 0.22
CHMP4C-201ENST00000297265 FSD1Q9BTV5 496 aa16.44■□□□□ 0.22
CHMP4C-201ENST00000297265 BTAF1O14981 1849 aa16.44■□□□□ 0.22
CHMP4C-201ENST00000297265 MED23Q9ULK4 1368 aa16.44■□□□□ 0.22
CHMP4C-201ENST00000297265 MAP4K1Q92918 833 aa16.44■□□□□ 0.22
CHMP4C-201ENST00000297265 CEP126Q9P2H0 1117 aa16.44■□□□□ 0.22
CHMP4C-201ENST00000297265 CIZ1Q9ULV3 898 aaPredicted RBP16.44■□□□□ 0.22
CHMP4C-201ENST00000297265 RIC1Q4ADV7 1423 aa16.43■□□□□ 0.22
CHMP4C-201ENST00000297265 KIAA1211Q6ZU35 1233 aa16.43■□□□□ 0.22
CHMP4C-201ENST00000297265 ZNF589Q86UQ0 364 aaPredicted RBP16.43■□□□□ 0.22
CHMP4C-201ENST00000297265 BCORQ6W2J9 1755 aa16.43■□□□□ 0.22
CHMP4C-201ENST00000297265 AFF2P51816 1311 aa16.42■□□□□ 0.22
CHMP4C-201ENST00000297265 CCDC171Q6TFL3 1326 aa16.42■□□□□ 0.22
CHMP4C-201ENST00000297265 NHSQ6T4R5 1651 aa16.42■□□□□ 0.22
CHMP4C-201ENST00000297265 VGLL2Q8N8G2 317 aa16.42■□□□□ 0.22
CHMP4C-201ENST00000297265 UPF3BQ9BZI7 483 aaKnown RBP16.42■□□□□ 0.22
CHMP4C-201ENST00000297265 DDX60Q8IY21 1712 aaKnown RBP16.42■□□□□ 0.22
CHMP4C-201ENST00000297265 NTSR2O95665 410 aa16.42■□□□□ 0.22
CHMP4C-201ENST00000297265 ADORA1P30542 326 aa16.42■□□□□ 0.22
CHMP4C-201ENST00000297265 MYT1Q01538 1121 aa16.42■□□□□ 0.22
CHMP4C-201ENST00000297265 SMIM5Q71RC9 77 aa16.42■□□□□ 0.22
CHMP4C-201ENST00000297265 AK7Q96M32 723 aa16.42■□□□□ 0.22
CHMP4C-201ENST00000297265 SBF2Q86WG5 1849 aa16.41■□□□□ 0.22
CHMP4C-201ENST00000297265 ATRNO75882 1429 aa16.41■□□□□ 0.22
CHMP4C-201ENST00000297265 HCLS1P14317 486 aaPredicted RBP16.41■□□□□ 0.22
CHMP4C-201ENST00000297265 RAB3GAP1Q15042 981 aa16.41■□□□□ 0.22
CHMP4C-201ENST00000297265 LDHAL6AQ6ZMR3 332 aa16.41■□□□□ 0.22
CHMP4C-201ENST00000297265 DDX46Q7L014 1031 aaKnown RBP16.41■□□□□ 0.22
CHMP4C-201ENST00000297265 KBTBD3Q8NAB2 608 aa16.41■□□□□ 0.22
CHMP4C-201ENST00000297265 TMX3Q96JJ7 454 aa16.41■□□□□ 0.22
CHMP4C-201ENST00000297265 TTC14Q96N46 770 aa16.41■□□□□ 0.22
CHMP4C-201ENST00000297265 DNAJC2Q99543 621 aaKnown RBP16.41■□□□□ 0.22
CHMP4C-201ENST00000297265 RFX7Q2KHR2 1363 aa16.41■□□□□ 0.22
CHMP4C-201ENST00000297265 SH3TC1Q8TE82 1336 aa16.4■□□□□ 0.22
CHMP4C-201ENST00000297265 CNTNAP4Q9C0A0 1308 aa16.4■□□□□ 0.22
CHMP4C-201ENST00000297265 ANKRD18BA2A2Z9 1011 aa16.4■□□□□ 0.22
CHMP4C-201ENST00000297265 ADCK5Q3MIX3 580 aa16.4■□□□□ 0.22
CHMP4C-201ENST00000297265 PARP10Q53GL7 1025 aa16.4■□□□□ 0.22
CHMP4C-201ENST00000297265 ZGPATQ8N5A5 531 aaKnown RBP16.4■□□□□ 0.22
CHMP4C-201ENST00000297265 XAGE2Q96GT9 111 aa16.4■□□□□ 0.22
CHMP4C-201ENST00000297265 UTP14AQ9BVJ6 771 aaKnown RBP16.4■□□□□ 0.22
CHMP4C-201ENST00000297265 LRP5O75197 1615 aa16.4■□□□□ 0.22
CHMP4C-201ENST00000297265 HSP90AA1P07900 732 aaKnown RBP16.39■□□□□ 0.22
CHMP4C-201ENST00000297265 CLEC4GQ6UXB4 293 aa16.39■□□□□ 0.22
CHMP4C-201ENST00000297265 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.39■□□□□ 0.22
CHMP4C-201ENST00000297265 SEC62Q99442 399 aaKnown RBP16.39■□□□□ 0.22
CHMP4C-201ENST00000297265 NIP7Q9Y221 180 aaKnown RBP eCLIP16.39■□□□□ 0.22
CHMP4C-201ENST00000297265 AKAP2Q9Y2D5 859 aa16.39■□□□□ 0.22
CHMP4C-201ENST00000297265 EP400Q96L91 3159 aa16.39■□□□□ 0.21
CHMP4C-201ENST00000297265 TAF5LO75529 589 aa16.39■□□□□ 0.21
CHMP4C-201ENST00000297265 CUL4AQ13619 759 aa16.39■□□□□ 0.21
CHMP4C-201ENST00000297265 COL9A3Q14050 684 aaPredicted RBP16.39■□□□□ 0.21
CHMP4C-201ENST00000297265 SLFNL1Q499Z3 407 aa16.39■□□□□ 0.21
CHMP4C-201ENST00000297265 TAF7LQ5H9L4 462 aa16.39■□□□□ 0.21
CHMP4C-201ENST00000297265 TNPO1Q92973 898 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms