RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 MAP3K2Q9Y2U5 619 aa22.64■■□□□ 1.21
TRA2A-201ENST00000297071 BTBD11A6QL63 1104 aa22.63■■□□□ 1.21
TRA2A-201ENST00000297071 RESTQ13127 1097 aa22.63■■□□□ 1.21
TRA2A-201ENST00000297071 PLEKHO1Q53GL0 409 aaPredicted RBP22.63■■□□□ 1.21
TRA2A-201ENST00000297071 GTF3C6Q969F1 213 aa22.63■■□□□ 1.21
TRA2A-201ENST00000297071 FAM227BQ96M60 508 aa22.63■■□□□ 1.21
TRA2A-201ENST00000297071 CGNQ9P2M7 1197 aaKnown RBP22.63■■□□□ 1.21
TRA2A-201ENST00000297071 GRM8O00222 908 aa22.62■■□□□ 1.21
TRA2A-201ENST00000297071 RBM6P78332 1123 aaKnown RBP22.62■■□□□ 1.21
TRA2A-201ENST00000297071 LARP1Q6PKG0 1096 aaKnown RBP22.62■■□□□ 1.21
TRA2A-201ENST00000297071 ABTB2Q8N961 1025 aa22.62■■□□□ 1.21
TRA2A-201ENST00000297071 EAF2Q96CJ1 260 aaPredicted RBP22.62■■□□□ 1.21
TRA2A-201ENST00000297071 SLC26A8Q96RN1 970 aa22.62■■□□□ 1.21
TRA2A-201ENST00000297071 TRIM5Q9C035 493 aa22.62■■□□□ 1.21
TRA2A-201ENST00000297071 LGR6Q9HBX8 967 aa22.62■■□□□ 1.21
TRA2A-201ENST00000297071 COL15A1P39059 1388 aa22.62■■□□□ 1.21
TRA2A-201ENST00000297071 DDX58O95786 925 aaKnown RBP22.61■■□□□ 1.21
TRA2A-201ENST00000297071 ZNF165P49910 485 aa22.61■■□□□ 1.21
TRA2A-201ENST00000297071 NCBP1Q09161 790 aaKnown RBP22.61■■□□□ 1.21
TRA2A-201ENST00000297071 A0A0D9SFI3 127 aa22.6■■□□□ 1.21
TRA2A-201ENST00000297071 CBX1P83916 185 aa22.6■■□□□ 1.21
TRA2A-201ENST00000297071 PGBD1Q96JS3 809 aa22.6■■□□□ 1.21
TRA2A-201ENST00000297071 TAF5LO75529 589 aa22.59■■□□□ 1.21
TRA2A-201ENST00000297071 TNNT1P13805 278 aa22.59■■□□□ 1.21
TRA2A-201ENST00000297071 IQCB1Q15051 598 aa22.59■■□□□ 1.21
TRA2A-201ENST00000297071 SMARCC2Q8TAQ2 1214 aa22.59■■□□□ 1.21
TRA2A-201ENST00000297071 FSD1Q9BTV5 496 aa22.59■■□□□ 1.21
TRA2A-201ENST00000297071 RNMTO43148 476 aaKnown RBP22.59■■□□□ 1.21
TRA2A-201ENST00000297071 NAA16Q6N069 864 aaPredicted RBP22.59■■□□□ 1.21
TRA2A-201ENST00000297071 FERMT3Q86UX7 667 aa22.59■■□□□ 1.21
TRA2A-201ENST00000297071 KCNH5Q8NCM2 988 aa22.59■■□□□ 1.21
TRA2A-201ENST00000297071 CHMP4CQ96CF2 233 aa22.59■■□□□ 1.21
TRA2A-201ENST00000297071 KAZALD1Q96I82 304 aa22.59■■□□□ 1.21
TRA2A-201ENST00000297071 PA2G4Q9UQ80 394 aaKnown RBP22.59■■□□□ 1.21
TRA2A-201ENST00000297071 U3KPZ7 1027 aaPredicted RBP22.59■■□□□ 1.21
TRA2A-201ENST00000297071 SETD1BQ9UPS6 1966 aaKnown RBP22.58■■□□□ 1.21
TRA2A-201ENST00000297071 GABPB1Q06547 395 aaPredicted RBP22.58■■□□□ 1.21
TRA2A-201ENST00000297071 CAMK4Q16566 473 aa22.58■■□□□ 1.21
TRA2A-201ENST00000297071 NBPF6Q5VWK0 638 aa22.58■■□□□ 1.21
TRA2A-201ENST00000297071 DRC7Q8IY82 874 aa22.58■■□□□ 1.21
TRA2A-201ENST00000297071 SUCLG2Q96I99 432 aa22.58■■□□□ 1.21
TRA2A-201ENST00000297071 NBPF4Q96M43 638 aa22.58■■□□□ 1.21
TRA2A-201ENST00000297071 RCOR1Q9UKL0 485 aa22.58■■□□□ 1.21
TRA2A-201ENST00000297071 KCNQ3O43525 872 aa22.57■■□□□ 1.2
TRA2A-201ENST00000297071 ATP5JP18859 108 aa22.57■■□□□ 1.2
TRA2A-201ENST00000297071 DHX8Q14562 1220 aaKnown RBP22.57■■□□□ 1.2
TRA2A-201ENST00000297071 CKAP2LQ8IYA6 745 aa22.57■■□□□ 1.2
TRA2A-201ENST00000297071 DDX21Q9NR30 783 aaKnown RBP eCLIP22.57■■□□□ 1.2
TRA2A-201ENST00000297071 CLIP2Q9UDT6 1046 aa22.57■■□□□ 1.2
TRA2A-201ENST00000297071 SCN11AQ9UI33 1791 aa22.57■■□□□ 1.2
TRA2A-201ENST00000297071 NR1I2O75469 434 aa22.57■■□□□ 1.2
TRA2A-201ENST00000297071 STX1AQ16623 288 aa22.57■■□□□ 1.2
TRA2A-201ENST00000297071 ZNF530Q6P9A1 599 aaPredicted RBP22.57■■□□□ 1.2
TRA2A-201ENST00000297071 CCDC112Q8NEF3 446 aa22.57■■□□□ 1.2
TRA2A-201ENST00000297071 LTV1Q96GA3 475 aaPredicted RBP22.57■■□□□ 1.2
TRA2A-201ENST00000297071 PRDM10Q9NQV6 1147 aa22.57■■□□□ 1.2
TRA2A-201ENST00000297071 CTNNA3Q9UI47 895 aa22.57■■□□□ 1.2
TRA2A-201ENST00000297071 KIF2AO00139 706 aaPredicted RBP22.56■■□□□ 1.2
TRA2A-201ENST00000297071 HMGB1P09429 215 aaKnown RBP22.56■■□□□ 1.2
TRA2A-201ENST00000297071 BICD2Q8TD16 824 aa22.56■■□□□ 1.2
TRA2A-201ENST00000297071 SLIT3O75094 1523 aa22.56■■□□□ 1.2
TRA2A-201ENST00000297071 AFDNP55196 1824 aaKnown RBP22.55■■□□□ 1.2
TRA2A-201ENST00000297071 SPEF2Q9C093 1822 aa22.55■■□□□ 1.2
TRA2A-201ENST00000297071 CACTINQ8WUQ7 758 aaKnown RBP22.55■■□□□ 1.2
TRA2A-201ENST00000297071 NEK1Q96PY6 1258 aa22.55■■□□□ 1.2
TRA2A-201ENST00000297071 TFIP11Q9UBB9 837 aaKnown RBP22.55■■□□□ 1.2
TRA2A-201ENST00000297071 GOLGA6L19H0YKK7 550 aa22.54■■□□□ 1.2
TRA2A-201ENST00000297071 FAM193AP78312 1265 aa22.54■■□□□ 1.2
TRA2A-201ENST00000297071 LRMPQ12912 555 aa22.54■■□□□ 1.2
TRA2A-201ENST00000297071 TPRNQ4KMQ1 711 aa22.54■■□□□ 1.2
TRA2A-201ENST00000297071 NUTM2GQ5VZR2 741 aa22.54■■□□□ 1.2
TRA2A-201ENST00000297071 FAM173BQ6P4H8 233 aa22.54■■□□□ 1.2
TRA2A-201ENST00000297071 LRRC8AQ8IWT6 810 aa22.54■■□□□ 1.2
TRA2A-201ENST00000297071 USHBP1Q8N6Y0 703 aa22.54■■□□□ 1.2
TRA2A-201ENST00000297071 DNAJC25Q9H1X3 360 aa22.54■■□□□ 1.2
TRA2A-201ENST00000297071 BICC1Q9H694 974 aaKnown RBP22.54■■□□□ 1.2
TRA2A-201ENST00000297071 COPRSQ9NQ92 184 aa22.54■■□□□ 1.2
TRA2A-201ENST00000297071 C5P01031 1676 aa22.54■■□□□ 1.2
TRA2A-201ENST00000297071 ZBTB7CA1YPR0 619 aa22.54■■□□□ 1.2
TRA2A-201ENST00000297071 BRF1Q92994 677 aa22.54■■□□□ 1.2
TRA2A-201ENST00000297071 ARID3AQ99856 593 aa22.54■■□□□ 1.2
TRA2A-201ENST00000297071 NRBP1Q9UHY1 535 aa22.54■■□□□ 1.2
TRA2A-201ENST00000297071 DDX41Q9UJV9 622 aaKnown RBP22.54■■□□□ 1.2
TRA2A-201ENST00000297071 MORC2Q9Y6X9 1032 aaPredicted RBP22.54■■□□□ 1.2
TRA2A-201ENST00000297071 PFKFB2O60825 505 aa22.53■■□□□ 1.2
TRA2A-201ENST00000297071 NYAP1Q6ZVC0 841 aa22.53■■□□□ 1.2
TRA2A-201ENST00000297071 CCDC8Q9H0W5 538 aaPredicted RBP22.53■■□□□ 1.2
TRA2A-201ENST00000297071 TUBB4AP04350 444 aa22.52■■□□□ 1.2
TRA2A-201ENST00000297071 U2AF2P26368 475 aaKnown RBP eCLIP22.52■■□□□ 1.23e-7■■□□□ 13.3
TRA2A-201ENST00000297071 TPD52L1Q16890 204 aaPredicted RBP22.52■■□□□ 1.2
TRA2A-201ENST00000297071 SLFNL1Q499Z3 407 aa22.52■■□□□ 1.2
TRA2A-201ENST00000297071 TAF3Q5VWG9 929 aa22.52■■□□□ 1.2
TRA2A-201ENST00000297071 FAM177BA6PVY3 158 aa22.52■■□□□ 1.2
TRA2A-201ENST00000297071 ANXA1P04083 346 aa22.52■■□□□ 1.2
TRA2A-201ENST00000297071 ADD1P35611 737 aaKnown RBP22.52■■□□□ 1.2
TRA2A-201ENST00000297071 C1orf141Q5JVX7 400 aa22.52■■□□□ 1.2
TRA2A-201ENST00000297071 CEP135Q66GS9 1140 aa22.52■■□□□ 1.2
TRA2A-201ENST00000297071 THEMISQ8N1K5 641 aaPredicted RBP22.52■■□□□ 1.2
TRA2A-201ENST00000297071 C16orf45Q96MC5 204 aaPredicted RBP22.52■■□□□ 1.2
TRA2A-201ENST00000297071 AGXT2Q9BYV1 514 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms