RNA–Protein interactions for RNA: ENST00000295896.12

C3orf49-201, Transcript of chromosome 3 open reading frame 49, humanhuman

APPRIS P5 TSL 2 BASIC

Gene C3orf49, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49-201ENST00000295896 USPL1Q5W0Q7 1092 aa12.08□□□□□ -0.48
C3orf49-201ENST00000295896 RIPOR1Q6ZS17 1223 aa12.08□□□□□ -0.48
C3orf49-201ENST00000295896 EFSO43281 561 aa12.07□□□□□ -0.48
C3orf49-201ENST00000295896 ERCC5P28715 1186 aaPredicted RBP12.07□□□□□ -0.48
C3orf49-201ENST00000295896 TTC39BQ5VTQ0 682 aaPredicted RBP12.07□□□□□ -0.48
C3orf49-201ENST00000295896 NUCKS1Q9H1E3 243 aaKnown RBP12.07□□□□□ -0.48
C3orf49-201ENST00000295896 CHRDQ9H2X0 955 aa12.07□□□□□ -0.48
C3orf49-201ENST00000295896 C12orf49Q9H741 205 aa12.07□□□□□ -0.48
C3orf49-201ENST00000295896 AAASQ9NRG9 546 aa12.07□□□□□ -0.48
C3orf49-201ENST00000295896 SLC35F4A4IF30 521 aa12.06□□□□□ -0.48
C3orf49-201ENST00000295896 PTSQ03393 145 aa12.06□□□□□ -0.48
C3orf49-201ENST00000295896 GALNT12Q8IXK2 581 aa12.06□□□□□ -0.48
C3orf49-201ENST00000295896 SRCIN1Q9C0H9 1055 aa12.06□□□□□ -0.48
C3orf49-201ENST00000295896 IGSF3O75054 1194 aa12.05□□□□□ -0.48
C3orf49-201ENST00000295896 CCINQ13939 588 aa12.05□□□□□ -0.48
C3orf49-201ENST00000295896 EPS8L3Q8TE67 593 aaKnown RBP12.05□□□□□ -0.48
C3orf49-201ENST00000295896 RNF34Q969K3 372 aa12.05□□□□□ -0.48
C3orf49-201ENST00000295896 KIFC2Q96AC6 838 aa12.05□□□□□ -0.48
C3orf49-201ENST00000295896 SENP2Q9HC62 589 aa12.05□□□□□ -0.48
C3orf49-201ENST00000295896 NPHS2Q9NP85 383 aa12.05□□□□□ -0.48
C3orf49-201ENST00000295896 KHNYNO15037 678 aaKnown RBP12.04□□□□□ -0.48
C3orf49-201ENST00000295896 ST8SIA5O15466 376 aa12.04□□□□□ -0.48
C3orf49-201ENST00000295896 ZNF76P36508 570 aa12.04□□□□□ -0.48
C3orf49-201ENST00000295896 FANCCQ00597 558 aa12.04□□□□□ -0.48
C3orf49-201ENST00000295896 C1orf127Q8N9H9 656 aa12.04□□□□□ -0.48
C3orf49-201ENST00000295896 GMCL1Q96IK5 515 aa12.04□□□□□ -0.48
C3orf49-201ENST00000295896 EFCC1Q9HA90 598 aa12.04□□□□□ -0.48
C3orf49-201ENST00000295896 CNTN3Q9P232 1028 aa12.04□□□□□ -0.48
C3orf49-201ENST00000295896 DCDC2BA2VCK2 349 aa12.03□□□□□ -0.48
C3orf49-201ENST00000295896 EREGO14944 169 aa12.03□□□□□ -0.48
C3orf49-201ENST00000295896 CES1P23141 567 aa12.03□□□□□ -0.48
C3orf49-201ENST00000295896 IRS1P35568 1242 aa12.03□□□□□ -0.48
C3orf49-201ENST00000295896 SFSWAPQ12872 951 aaKnown RBP12.03□□□□□ -0.48
C3orf49-201ENST00000295896 TRIM22Q8IYM9 498 aa12.03□□□□□ -0.48
C3orf49-201ENST00000295896 FAM8A1Q9UBU6 413 aa12.03□□□□□ -0.48
C3orf49-201ENST00000295896 THBS1P07996 1170 aa12.02□□□□□ -0.49
C3orf49-201ENST00000295896 CTSHP09668 335 aa12.02□□□□□ -0.49
C3orf49-201ENST00000295896 VEGFBP49765 207 aa12.02□□□□□ -0.49
C3orf49-201ENST00000295896 TNP2Q05952 138 aa12.02□□□□□ -0.49
C3orf49-201ENST00000295896 UBAP2LQ14157 1087 aaKnown RBP12.02□□□□□ -0.49
C3orf49-201ENST00000295896 PI16Q6UXB8 463 aa12.02□□□□□ -0.49
C3orf49-201ENST00000295896 METTL16Q86W50 562 aaKnown RBP12.02□□□□□ -0.49
C3orf49-201ENST00000295896 GSX2Q9BZM3 304 aa12.02□□□□□ -0.49
C3orf49-201ENST00000295896 SOBPA7XYQ1 873 aa12.01□□□□□ -0.49
C3orf49-201ENST00000295896 PHF20L1A8MW92 1017 aa12.01□□□□□ -0.49
C3orf49-201ENST00000295896 SASH3O75995 380 aa12.01□□□□□ -0.49
C3orf49-201ENST00000295896 NT5DC4Q86YG4 428 aa12.01□□□□□ -0.49
C3orf49-201ENST00000295896 CCDC155Q8N6L0 562 aa12.01□□□□□ -0.49
C3orf49-201ENST00000295896 OSBPL7Q9BZF2 842 aa12.01□□□□□ -0.49
C3orf49-201ENST00000295896 GADD45BO75293 160 aaPredicted RBP12□□□□□ -0.49
C3orf49-201ENST00000295896 POLR3DP05423 398 aaPredicted RBP12□□□□□ -0.49
C3orf49-201ENST00000295896 RARAP10276 462 aa12□□□□□ -0.49
C3orf49-201ENST00000295896 MAPTP10636 758 aaKnown RBP12□□□□□ -0.49
C3orf49-201ENST00000295896 EDN3P14138 238 aa12□□□□□ -0.49
C3orf49-201ENST00000295896 OR13H1Q8NG92 308 aa12□□□□□ -0.49
C3orf49-201ENST00000295896 PNMA5Q96PV4 448 aa12□□□□□ -0.49
C3orf49-201ENST00000295896 SUV39H2Q9H5I1 410 aa12□□□□□ -0.49
C3orf49-201ENST00000295896 MARK1Q9P0L2 795 aa12□□□□□ -0.49
C3orf49-201ENST00000295896 USP35Q9P2H5 1018 aa12□□□□□ -0.49
C3orf49-201ENST00000295896 C9orf131Q5VYM1 1079 aa11.99□□□□□ -0.49
C3orf49-201ENST00000295896 NDFIP2Q9NV92 336 aa11.99□□□□□ -0.49
C3orf49-201ENST00000295896 DBN1Q16643 649 aa11.98□□□□□ -0.49
C3orf49-201ENST00000295896 KRT25Q7Z3Z0 450 aa11.98□□□□□ -0.49
C3orf49-201ENST00000295896 BCO2Q9BYV7 579 aa11.98□□□□□ -0.49
C3orf49-201ENST00000295896 TGIF2Q9GZN2 237 aa11.98□□□□□ -0.49
C3orf49-201ENST00000295896 TRAK1Q9UPV9 953 aa11.98□□□□□ -0.49
C3orf49-201ENST00000295896 BNIP3LO60238 219 aa11.97□□□□□ -0.49
C3orf49-201ENST00000295896 MMP20O60882 483 aa11.97□□□□□ -0.49
C3orf49-201ENST00000295896 TARSP26639 723 aaKnown RBP11.97□□□□□ -0.49
C3orf49-201ENST00000295896 SOX18P35713 384 aa11.97□□□□□ -0.49
C3orf49-201ENST00000295896 RAD51AP2Q09MP3 1159 aa11.97□□□□□ -0.49
C3orf49-201ENST00000295896 SPEM2Q0P670 501 aa11.97□□□□□ -0.49
C3orf49-201ENST00000295896 NAALADL2Q58DX5 795 aa11.97□□□□□ -0.49
C3orf49-201ENST00000295896 KIAA0319Q5VV43 1072 aa11.97□□□□□ -0.49
C3orf49-201ENST00000295896 TRIM47Q96LD4 638 aa11.97□□□□□ -0.49
C3orf49-201ENST00000295896 PPP4R2Q9NY27 417 aa11.97□□□□□ -0.49
C3orf49-201ENST00000295896 DACH1Q9UI36 760 aa11.97□□□□□ -0.49
C3orf49-201ENST00000295896 ATXN7L1Q9ULK2 861 aaPredicted RBP11.97□□□□□ -0.49
C3orf49-201ENST00000295896 PHF24Q9UPV7 400 aa11.97□□□□□ -0.49
C3orf49-201ENST00000295896 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.97□□□□□ -0.49
C3orf49-201ENST00000295896 USP31Q70CQ4 1352 aa11.96□□□□□ -0.49
C3orf49-201ENST00000295896 MAP3K6O95382 1288 aa11.96□□□□□ -0.49
C3orf49-201ENST00000295896 USP17L7P0C7H9 530 aa11.96□□□□□ -0.49
C3orf49-201ENST00000295896 ST13P50502 369 aaKnown RBP11.96□□□□□ -0.49
C3orf49-201ENST00000295896 NXPE4Q6UWF7 544 aa11.96□□□□□ -0.49
C3orf49-201ENST00000295896 ZNF837Q96EG3 531 aaPredicted RBP11.96□□□□□ -0.49
C3orf49-201ENST00000295896 CYP2E1P05181 493 aaPredicted RBP11.95□□□□□ -0.5
C3orf49-201ENST00000295896 PSAPP07602 524 aa11.95□□□□□ -0.5
C3orf49-201ENST00000295896 NFKB1P19838 968 aa11.95□□□□□ -0.5
C3orf49-201ENST00000295896 ITGA6P23229 1130 aa11.95□□□□□ -0.5
C3orf49-201ENST00000295896 NEUROD1Q13562 356 aa11.95□□□□□ -0.5
C3orf49-201ENST00000295896 GRM2Q14416 872 aa11.95□□□□□ -0.5
C3orf49-201ENST00000295896 SREK1Q8WXA9 508 aaKnown RBP11.95□□□□□ -0.5
C3orf49-201ENST00000295896 CCSER2Q9H7U1 834 aa11.95□□□□□ -0.5
C3orf49-201ENST00000295896 STRN4Q9NRL3 753 aa11.95□□□□□ -0.5
C3orf49-201ENST00000295896 CUEDC1Q9NWM3 386 aaPredicted RBP11.95□□□□□ -0.5
C3orf49-201ENST00000295896 TLR7Q9NYK1 1049 aaKnown RBP11.95□□□□□ -0.5
C3orf49-201ENST00000295896 KANSL3Q9P2N6 904 aa11.95□□□□□ -0.5
C3orf49-201ENST00000295896 HOXD8P13378 290 aaPredicted RBP11.94□□□□□ -0.5
C3orf49-201ENST00000295896 GSTT1P30711 240 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms