RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 PRC1O43663 620 aa19.9■□□□□ 0.78
SHANK1-201ENST00000293441 NYXQ9GZU5 481 aa19.9■□□□□ 0.78
SHANK1-201ENST00000293441 TFCP2L1Q9NZI6 479 aa19.9■□□□□ 0.78
SHANK1-201ENST00000293441 MAP3K1Q13233 1512 aa19.9■□□□□ 0.78
SHANK1-201ENST00000293441 GPATCH8Q9UKJ3 1502 aaKnown RBP19.89■□□□□ 0.78
SHANK1-201ENST00000293441 USO1O60763 962 aaKnown RBP19.89■□□□□ 0.78
SHANK1-201ENST00000293441 HEATR3Q7Z4Q2 680 aa19.89■□□□□ 0.78
SHANK1-201ENST00000293441 LUZP1Q86V48 1076 aa19.89■□□□□ 0.78
SHANK1-201ENST00000293441 NCKAP5LQ9HCH0 1330 aa19.89■□□□□ 0.78
SHANK1-201ENST00000293441 NFATC2IPQ8NCF5 419 aa19.89■□□□□ 0.77
SHANK1-201ENST00000293441 EIF4A2Q14240 407 aaKnown RBP19.89■□□□□ 0.77
SHANK1-201ENST00000293441 GSTTP1A0A1W2PQM5 241 aa19.89■□□□□ 0.77
SHANK1-201ENST00000293441 CTNNA2P26232 953 aa19.89■□□□□ 0.77
SHANK1-201ENST00000293441 TBC1D2Q9BYX2 928 aa19.89■□□□□ 0.77
SHANK1-201ENST00000293441 VEZTQ9HBM0 779 aa19.89■□□□□ 0.77
SHANK1-201ENST00000293441 SYCP2Q9BX26 1530 aa19.88■□□□□ 0.77
SHANK1-201ENST00000293441 IGHDP01880 384 aa19.88■□□□□ 0.77
SHANK1-201ENST00000293441 RBM26Q5T8P6 1007 aaKnown RBP19.88■□□□□ 0.77
SHANK1-201ENST00000293441 TNPO1Q92973 898 aaKnown RBP19.88■□□□□ 0.77
SHANK1-201ENST00000293441 RTCBQ9Y3I0 505 aaKnown RBP19.88■□□□□ 0.77
SHANK1-201ENST00000293441 PARP3Q9Y6F1 533 aa19.88■□□□□ 0.77
SHANK1-201ENST00000293441 WDR7Q9Y4E6 1490 aa19.88■□□□□ 0.77
SHANK1-201ENST00000293441 URI1O94763 535 aaPredicted RBP19.88■□□□□ 0.77
SHANK1-201ENST00000293441 BMP2KLQ5H9B9 411 aa19.88■□□□□ 0.77
SHANK1-201ENST00000293441 CA8P35219 290 aa19.88■□□□□ 0.77
SHANK1-201ENST00000293441 NECAB1Q8N987 351 aa19.88■□□□□ 0.77
SHANK1-201ENST00000293441 DYDC1Q8WWB3 177 aa19.88■□□□□ 0.77
SHANK1-201ENST00000293441 DDX19AQ9NUU7 478 aaKnown RBP19.88■□□□□ 0.77
SHANK1-201ENST00000293441 ZBTB43O43298 467 aa19.87■□□□□ 0.77
SHANK1-201ENST00000293441 CRACR2AQ9BSW2 395 aa19.87■□□□□ 0.77
SHANK1-201ENST00000293441 ASXL1Q8IXJ9 1541 aa19.87■□□□□ 0.77
SHANK1-201ENST00000293441 RALGAPBQ86X10 1494 aa19.87■□□□□ 0.77
SHANK1-201ENST00000293441 ESR2Q92731 530 aa19.87■□□□□ 0.77
SHANK1-201ENST00000293441 VTI1AQ96AJ9 217 aa19.87■□□□□ 0.77
SHANK1-201ENST00000293441 TBCAO75347 108 aaKnown RBP19.87■□□□□ 0.77
SHANK1-201ENST00000293441 ECM2O94769 699 aaPredicted RBP19.87■□□□□ 0.77
SHANK1-201ENST00000293441 ZFYP08048 801 aaPredicted RBP19.87■□□□□ 0.77
SHANK1-201ENST00000293441 STX1AQ16623 288 aa19.87■□□□□ 0.77
SHANK1-201ENST00000293441 KSR2Q6VAB6 950 aa19.87■□□□□ 0.77
SHANK1-201ENST00000293441 RIMBP2O15034 1052 aa19.87■□□□□ 0.77
SHANK1-201ENST00000293441 IL27Q8NEV9 243 aa19.87■□□□□ 0.77
SHANK1-201ENST00000293441 BRF1Q92994 677 aa19.87■□□□□ 0.77
SHANK1-201ENST00000293441 HSPA2P54652 639 aa19.86■□□□□ 0.77
SHANK1-201ENST00000293441 TMC6Q7Z403 805 aa19.86■□□□□ 0.77
SHANK1-201ENST00000293441 C8orf58Q8NAV2 365 aa19.86■□□□□ 0.77
SHANK1-201ENST00000293441 EXOC1Q9NV70 894 aa19.86■□□□□ 0.77
SHANK1-201ENST00000293441 TRMT1Q9NXH9 659 aaKnown RBP19.86■□□□□ 0.77
SHANK1-201ENST00000293441 MAGEB6P1A0A0J9YX57 407 aa19.86■□□□□ 0.77
SHANK1-201ENST00000293441 PLS1Q14651 629 aa19.86■□□□□ 0.77
SHANK1-201ENST00000293441 SLC9C2Q5TAH2 1124 aa19.86■□□□□ 0.77
SHANK1-201ENST00000293441 TMCO5BA8MYB1 307 aa19.86■□□□□ 0.77
SHANK1-201ENST00000293441 RTN1Q16799 776 aa19.86■□□□□ 0.77
SHANK1-201ENST00000293441 CCDC91Q7Z6B0 441 aa19.86■□□□□ 0.77
SHANK1-201ENST00000293441 PA2G4Q9UQ80 394 aaKnown RBP19.86■□□□□ 0.77
SHANK1-201ENST00000293441 PLCH2O75038 1416 aa19.85■□□□□ 0.77
SHANK1-201ENST00000293441 MTHFSDQ2M296 383 aaKnown RBP19.85■□□□□ 0.77
SHANK1-201ENST00000293441 FAM114A1Q8IWE2 563 aa19.85■□□□□ 0.77
SHANK1-201ENST00000293441 MCMDC2Q4G0Z9 681 aa19.85■□□□□ 0.77
SHANK1-201ENST00000293441 PYM1Q9BRP8 204 aaKnown RBP19.85■□□□□ 0.77
SHANK1-201ENST00000293441 ALG1Q9BT22 464 aa19.85■□□□□ 0.77
SHANK1-201ENST00000293441 SDSP20132 328 aa19.85■□□□□ 0.77
SHANK1-201ENST00000293441 CNNM2Q9H8M5 875 aa19.85■□□□□ 0.77
SHANK1-201ENST00000293441 USP25Q9UHP3 1055 aa19.85■□□□□ 0.77
SHANK1-201ENST00000293441 ESPNB1AK53 854 aa19.84■□□□□ 0.77
SHANK1-201ENST00000293441 IL15P40933 162 aaPredicted RBP19.84■□□□□ 0.77
SHANK1-201ENST00000293441 NUCB1Q02818 461 aa19.84■□□□□ 0.77
SHANK1-201ENST00000293441 KANK3Q6NY19 840 aa19.84■□□□□ 0.77
SHANK1-201ENST00000293441 TCEANC2Q96MN5 208 aa19.84■□□□□ 0.77
SHANK1-201ENST00000293441 TPTE2Q6XPS3 522 aa19.84■□□□□ 0.77
SHANK1-201ENST00000293441 NOP2P46087 812 aaKnown RBP19.84■□□□□ 0.77
SHANK1-201ENST00000293441 IFFO1Q0D2I5 559 aa19.84■□□□□ 0.77
SHANK1-201ENST00000293441 CCDC174Q6PII3 467 aa19.84■□□□□ 0.77
SHANK1-201ENST00000293441 NBPF7P0C2Y1 421 aaPredicted RBP19.83■□□□□ 0.77
SHANK1-201ENST00000293441 PAFAH1B1P43034 410 aa19.83■□□□□ 0.77
SHANK1-201ENST00000293441 PRPF4BQ13523 1007 aaKnown RBP19.83■□□□□ 0.77
SHANK1-201ENST00000293441 HELBQ8NG08 1087 aaPredicted RBP19.83■□□□□ 0.77
SHANK1-201ENST00000293441 LRRC27Q9C0I9 530 aa19.83■□□□□ 0.77
SHANK1-201ENST00000293441 POLD1P28340 1107 aa19.83■□□□□ 0.77
SHANK1-201ENST00000293441 CCDC102BQ68D86 513 aa19.83■□□□□ 0.77
SHANK1-201ENST00000293441 ERMNQ8TAM6 284 aa19.83■□□□□ 0.77
SHANK1-201ENST00000293441 ZC3H12CQ9C0D7 883 aaKnown RBP19.83■□□□□ 0.77
SHANK1-201ENST00000293441 BCCIPQ9P287 314 aaKnown RBP eCLIP19.83■□□□□ 0.77
SHANK1-201ENST00000293441 RBM8AQ9Y5S9 174 aaKnown RBP19.83■□□□□ 0.77
SHANK1-201ENST00000293441 HOOK3Q86VS8 718 aa19.83■□□□□ 0.77
SHANK1-201ENST00000293441 ZNF518AQ6AHZ1 1483 aa19.83■□□□□ 0.76
SHANK1-201ENST00000293441 KIF2AO00139 706 aaPredicted RBP19.83■□□□□ 0.76
SHANK1-201ENST00000293441 ALDH1L1O75891 902 aa19.83■□□□□ 0.76
SHANK1-201ENST00000293441 GBP3Q9H0R5 595 aa19.83■□□□□ 0.76
SHANK1-201ENST00000293441 NSFL1CQ9UNZ2 370 aaKnown RBP19.83■□□□□ 0.76
SHANK1-201ENST00000293441 ABCC1P33527 1531 aa19.82■□□□□ 0.76
SHANK1-201ENST00000293441 AFMP43652 599 aa19.82■□□□□ 0.76
SHANK1-201ENST00000293441 MRPL50Q8N5N7 158 aaKnown RBP19.82■□□□□ 0.76
SHANK1-201ENST00000293441 KIF18AQ8NI77 898 aa19.82■□□□□ 0.76
SHANK1-201ENST00000293441 IRS4O14654 1257 aaPredicted RBP19.82■□□□□ 0.76
SHANK1-201ENST00000293441 TRIM47Q96LD4 638 aa19.82■□□□□ 0.76
SHANK1-201ENST00000293441 PAG1Q9NWQ8 432 aa19.82■□□□□ 0.76
SHANK1-201ENST00000293441 Q6ZUG5 572 aa19.82■□□□□ 0.76
SHANK1-201ENST00000293441 JAG2Q9Y219 1238 aa19.82■□□□□ 0.76
SHANK1-201ENST00000293441 ATP10BO94823 1461 aa19.82■□□□□ 0.76
SHANK1-201ENST00000293441 STAT6P42226 847 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms