RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 N4BP3O15049 544 aa17.62■□□□□ 0.41
SHROOM4-201ENST00000289292 CATIPQ7Z7H3 387 aa17.62■□□□□ 0.41
SHROOM4-201ENST00000289292 TMOD3Q9NYL9 352 aa17.62■□□□□ 0.41
SHROOM4-201ENST00000289292 KDM2BQ8NHM5 1336 aa17.62■□□□□ 0.41
SHROOM4-201ENST00000289292 RTL1A6NKG5 1358 aa17.62■□□□□ 0.41
SHROOM4-201ENST00000289292 PLCD3Q8N3E9 789 aa17.62■□□□□ 0.41
SHROOM4-201ENST00000289292 ALS2CR12Q96Q35 445 aa17.62■□□□□ 0.41
SHROOM4-201ENST00000289292 SLC5A1P13866 664 aa17.61■□□□□ 0.41
SHROOM4-201ENST00000289292 RRAGBQ5VZM2 374 aa17.61■□□□□ 0.41
SHROOM4-201ENST00000289292 MRPS27Q92552 414 aaKnown RBP17.61■□□□□ 0.41
SHROOM4-201ENST00000289292 MICALCLQ6ZW33 695 aa17.61■□□□□ 0.41
SHROOM4-201ENST00000289292 ALG1Q9BT22 464 aa17.61■□□□□ 0.41
SHROOM4-201ENST00000289292 PUF60Q9UHX1 559 aaKnown RBP17.61■□□□□ 0.41
SHROOM4-201ENST00000289292 SLU7O95391 586 aaKnown RBP17.61■□□□□ 0.41
SHROOM4-201ENST00000289292 UBE4AQ14139 1066 aa17.61■□□□□ 0.41
SHROOM4-201ENST00000289292 CAVIN4Q5BKX8 364 aa17.61■□□□□ 0.41
SHROOM4-201ENST00000289292 IQCA1Q86XH1 822 aa17.61■□□□□ 0.41
SHROOM4-201ENST00000289292 GTF3C6Q969F1 213 aa17.61■□□□□ 0.41
SHROOM4-201ENST00000289292 GOLGA6L9A6NEM1 432 aa17.61■□□□□ 0.41
SHROOM4-201ENST00000289292 MSH6P52701 1360 aa17.6■□□□□ 0.41
SHROOM4-201ENST00000289292 ATP8B2P98198 1209 aa17.6■□□□□ 0.41
SHROOM4-201ENST00000289292 AMOTQ4VCS5 1084 aa17.6■□□□□ 0.41
SHROOM4-201ENST00000289292 ANKRD18BA2A2Z9 1011 aa17.6■□□□□ 0.41
SHROOM4-201ENST00000289292 SPECC1Q5M775 1068 aa17.6■□□□□ 0.41
SHROOM4-201ENST00000289292 NOP2P46087 812 aaKnown RBP17.6■□□□□ 0.41
SHROOM4-201ENST00000289292 APOBRQ0VD83 1088 aa17.6■□□□□ 0.41
SHROOM4-201ENST00000289292 DZIP1Q86YF9 867 aaKnown RBP17.6■□□□□ 0.41
SHROOM4-201ENST00000289292 MACROD2A1Z1Q3 448 aa17.6■□□□□ 0.41
SHROOM4-201ENST00000289292 TRMT1LQ7Z2T5 733 aaKnown RBP17.6■□□□□ 0.41
SHROOM4-201ENST00000289292 CAPZA3Q96KX2 299 aa17.6■□□□□ 0.41
SHROOM4-201ENST00000289292 ARFGAP3Q9NP61 516 aa17.6■□□□□ 0.41
SHROOM4-201ENST00000289292 ANAPC15P60006 121 aa17.59■□□□□ 0.41
SHROOM4-201ENST00000289292 MMRN2Q9H8L6 949 aa17.59■□□□□ 0.41
SHROOM4-201ENST00000289292 IFNKQ9P0W0 207 aa17.59■□□□□ 0.41
SHROOM4-201ENST00000289292 IDEP14735 1019 aa17.59■□□□□ 0.41
SHROOM4-201ENST00000289292 CCDC40Q4G0X9 1142 aa17.59■□□□□ 0.41
SHROOM4-201ENST00000289292 TRIM47Q96LD4 638 aa17.59■□□□□ 0.41
SHROOM4-201ENST00000289292 VPS18Q9P253 973 aa17.59■□□□□ 0.41
SHROOM4-201ENST00000289292 CCDC96Q2M329 555 aa17.59■□□□□ 0.41
SHROOM4-201ENST00000289292 ACEP12821 1306 aa17.59■□□□□ 0.41
SHROOM4-201ENST00000289292 GSTTP1A0A1W2PQM5 241 aa17.58■□□□□ 0.41
SHROOM4-201ENST00000289292 MFSD6Q6ZSS7 791 aa17.58■□□□□ 0.41
SHROOM4-201ENST00000289292 CARD14Q9BXL6 1004 aa17.58■□□□□ 0.41
SHROOM4-201ENST00000289292 DMRT2Q9Y5R5 561 aa17.58■□□□□ 0.41
SHROOM4-201ENST00000289292 HSF2BPO75031 334 aa17.58■□□□□ 0.4
SHROOM4-201ENST00000289292 ZNF444Q8N0Y2 327 aaPredicted RBP17.58■□□□□ 0.4
SHROOM4-201ENST00000289292 LZTFL1Q9NQ48 299 aa17.58■□□□□ 0.4
SHROOM4-201ENST00000289292 VAMP4O75379 141 aa17.58■□□□□ 0.4
SHROOM4-201ENST00000289292 DCTPP1Q9H773 170 aa17.58■□□□□ 0.4
SHROOM4-201ENST00000289292 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.58■□□□□ 0.4
SHROOM4-201ENST00000289292 PPP1R12BO60237 982 aaPredicted RBP17.58■□□□□ 0.4
SHROOM4-201ENST00000289292 GPATCH8Q9UKJ3 1502 aaKnown RBP17.58■□□□□ 0.4
SHROOM4-201ENST00000289292 FOXO3O43524 673 aa17.57■□□□□ 0.4
SHROOM4-201ENST00000289292 PHACTR2O75167 634 aa17.57■□□□□ 0.4
SHROOM4-201ENST00000289292 U2AF2P26368 475 aaKnown RBP eCLIP17.57■□□□□ 0.4
SHROOM4-201ENST00000289292 TCERG1LQ5VWI1 586 aa17.57■□□□□ 0.4
SHROOM4-201ENST00000289292 CREB3L3Q68CJ9 461 aa17.57■□□□□ 0.4
SHROOM4-201ENST00000289292 TTC21BQ7Z4L5 1316 aa17.57■□□□□ 0.4
SHROOM4-201ENST00000289292 RHOXF2BP0C7M4 288 aa17.57■□□□□ 0.4
SHROOM4-201ENST00000289292 RHOXF2Q9BQY4 288 aa17.57■□□□□ 0.4
SHROOM4-201ENST00000289292 CTAGE15A4D2H0 777 aa17.57■□□□□ 0.4
SHROOM4-201ENST00000289292 CTAGE8P0CG41 777 aa17.57■□□□□ 0.4
SHROOM4-201ENST00000289292 CTAGE6Q86UF2 777 aa17.57■□□□□ 0.4
SHROOM4-201ENST00000289292 CTAGE4Q8IX94 777 aa17.57■□□□□ 0.4
SHROOM4-201ENST00000289292 CWC25Q9NXE8 425 aaPredicted RBP17.57■□□□□ 0.4
SHROOM4-201ENST00000289292 ANKIB1Q9P2G1 1089 aa17.57■□□□□ 0.4
SHROOM4-201ENST00000289292 RXRAP19793 462 aa17.57■□□□□ 0.4
SHROOM4-201ENST00000289292 CHMLP26374 656 aa17.57■□□□□ 0.4
SHROOM4-201ENST00000289292 AMOTL2Q9Y2J4 779 aa17.57■□□□□ 0.4
SHROOM4-201ENST00000289292 STX17P56962 302 aa17.57■□□□□ 0.4
SHROOM4-201ENST00000289292 WWC2Q6AWC2 1192 aa17.57■□□□□ 0.4
SHROOM4-201ENST00000289292 GADD45BO75293 160 aaPredicted RBP17.56■□□□□ 0.4
SHROOM4-201ENST00000289292 TMEM266Q2M3C6 531 aa17.56■□□□□ 0.4
SHROOM4-201ENST00000289292 ANKLE2Q86XL3 938 aa17.56■□□□□ 0.4
SHROOM4-201ENST00000289292 ZMYM4Q5VZL5 1548 aa17.56■□□□□ 0.4
SHROOM4-201ENST00000289292 SMAP1Q8IYB5 467 aaPredicted RBP17.56■□□□□ 0.4
SHROOM4-201ENST00000289292 DHX58Q96C10 678 aa17.56■□□□□ 0.4
SHROOM4-201ENST00000289292 SBNO2Q9Y2G9 1366 aa17.56■□□□□ 0.4
SHROOM4-201ENST00000289292 TRIM21P19474 475 aaKnown RBP17.56■□□□□ 0.4
SHROOM4-201ENST00000289292 MCMDC2Q4G0Z9 681 aa17.56■□□□□ 0.4
SHROOM4-201ENST00000289292 LDHAL6AQ6ZMR3 332 aa17.56■□□□□ 0.4
SHROOM4-201ENST00000289292 KCNG4Q8TDN1 519 aa17.56■□□□□ 0.4
SHROOM4-201ENST00000289292 PHACTR3Q96KR7 559 aa17.56■□□□□ 0.4
SHROOM4-201ENST00000289292 RNF41Q9H4P4 317 aaPredicted RBP17.56■□□□□ 0.4
SHROOM4-201ENST00000289292 CAVIN2O95810 425 aa17.56■□□□□ 0.4
SHROOM4-201ENST00000289292 RUFY3Q7L099 469 aa17.56■□□□□ 0.4
SHROOM4-201ENST00000289292 MICALL1Q8N3F8 863 aa17.56■□□□□ 0.4
SHROOM4-201ENST00000289292 PAF1Q8N7H5 531 aa17.56■□□□□ 0.4
SHROOM4-201ENST00000289292 RIOK3O14730 519 aaKnown RBP17.56■□□□□ 0.4
SHROOM4-201ENST00000289292 FGFR1OPO95684 399 aaKnown RBP17.56■□□□□ 0.4
SHROOM4-201ENST00000289292 C10orf67Q8IYJ2 551 aa17.56■□□□□ 0.4
SHROOM4-201ENST00000289292 VPS36Q86VN1 386 aa17.55■□□□□ 0.4
SHROOM4-201ENST00000289292 HS1BP3Q53T59 392 aa17.55■□□□□ 0.4
SHROOM4-201ENST00000289292 SLC39A6Q13433 755 aa17.55■□□□□ 0.4
SHROOM4-201ENST00000289292 CAPN2P17655 700 aa17.55■□□□□ 0.4
SHROOM4-201ENST00000289292 DNAJC21Q5F1R6 531 aaKnown RBP17.55■□□□□ 0.4
SHROOM4-201ENST00000289292 TESK2Q96S53 571 aa17.55■□□□□ 0.4
SHROOM4-201ENST00000289292 NAA15Q9BXJ9 866 aaKnown RBP17.55■□□□□ 0.4
SHROOM4-201ENST00000289292 PPP1R1BQ9UD71 204 aaPredicted RBP17.55■□□□□ 0.4
SHROOM4-201ENST00000289292 POLR3AO14802 1390 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms