RNA–Protein interactions for RNA: ENST00000279804.2

CTF1-201, Transcript of cardiotrophin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTF1, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-201ENST00000279804 PIM2Q9P1W9 311 aa29.84■■■□□ 2.37
CTF1-201ENST00000279804 NEFLP07196 543 aa29.83■■■□□ 2.37
CTF1-201ENST00000279804 SUCLG2Q96I99 432 aa29.83■■■□□ 2.37
CTF1-201ENST00000279804 CRBNQ96SW2 442 aa29.83■■■□□ 2.37
CTF1-201ENST00000279804 MEIS3Q99687 375 aa29.83■■■□□ 2.37
CTF1-201ENST00000279804 EPHA10Q5JZY3 1008 aa29.82■■■□□ 2.36
CTF1-201ENST00000279804 STYK1Q6J9G0 422 aa29.82■■■□□ 2.36
CTF1-201ENST00000279804 ITPRIPQ8IWB1 547 aa29.82■■■□□ 2.36
CTF1-201ENST00000279804 PELP1Q8IZL8 1130 aaKnown RBP29.82■■■□□ 2.36
CTF1-201ENST00000279804 COG6Q9Y2V7 657 aa29.82■■■□□ 2.36
CTF1-201ENST00000279804 GTF3C3Q9Y5Q9 886 aa29.82■■■□□ 2.36
CTF1-201ENST00000279804 HSP90B1P14625 803 aaKnown RBP29.82■■■□□ 2.36
CTF1-201ENST00000279804 CTSWP56202 376 aa29.82■■■□□ 2.36
CTF1-201ENST00000279804 SF3B3Q15393 1217 aaKnown RBP29.82■■■□□ 2.36
CTF1-201ENST00000279804 PLA2G12BQ9BX93 195 aa29.82■■■□□ 2.36
CTF1-201ENST00000279804 KAZALD1Q96I82 304 aa29.81■■■□□ 2.36
CTF1-201ENST00000279804 FOXO4P98177 505 aa29.8■■■□□ 2.36
CTF1-201ENST00000279804 TTLL11Q8NHH1 800 aa29.8■■■□□ 2.36
CTF1-201ENST00000279804 BCS1LQ9Y276 419 aa29.8■■■□□ 2.36
CTF1-201ENST00000279804 MS4A1P11836 297 aa29.79■■■□□ 2.36
CTF1-201ENST00000279804 HOXA10P31260 410 aaPredicted RBP29.79■■■□□ 2.36
CTF1-201ENST00000279804 TTLL6Q8N841 843 aa29.79■■■□□ 2.36
CTF1-201ENST00000279804 RBM17Q96I25 401 aaKnown RBP29.79■■■□□ 2.36
CTF1-201ENST00000279804 DALRD3Q5D0E6 543 aaKnown RBP29.79■■■□□ 2.36
CTF1-201ENST00000279804 UBTFL1P0CB47 393 aaPredicted RBP29.78■■■□□ 2.36
CTF1-201ENST00000279804 YBX3P16989 372 aaKnown RBP eCLIP29.78■■■□□ 2.36
CTF1-201ENST00000279804 EXOC6Q8TAG9 804 aa29.78■■■□□ 2.36
CTF1-201ENST00000279804 SEC31BQ9NQW1 1179 aa29.78■■■□□ 2.36
CTF1-201ENST00000279804 MVPQ14764 893 aaKnown RBP29.77■■■□□ 2.36
CTF1-201ENST00000279804 CCDC152Q4G0S7 254 aa29.77■■■□□ 2.36
CTF1-201ENST00000279804 PRPF40BQ6NWY9 871 aaKnown RBP29.77■■■□□ 2.36
CTF1-201ENST00000279804 CNKSR1Q969H4 720 aa29.77■■■□□ 2.36
CTF1-201ENST00000279804 ZNF219Q9P2Y4 722 aaPredicted RBP29.77■■■□□ 2.36
CTF1-201ENST00000279804 DDX46Q7L014 1031 aaKnown RBP29.76■■■□□ 2.36
CTF1-201ENST00000279804 BICC1Q9H694 974 aaKnown RBP29.76■■■□□ 2.36
CTF1-201ENST00000279804 GREM2Q9H772 168 aa29.76■■■□□ 2.36
CTF1-201ENST00000279804 ALDH1B1P30837 517 aa29.76■■■□□ 2.35
CTF1-201ENST00000279804 SLC51AQ86UW1 340 aa29.76■■■□□ 2.35
CTF1-201ENST00000279804 CRAMP1Q96RY5 1269 aa29.76■■■□□ 2.35
CTF1-201ENST00000279804 UTRNP46939 3433 aa29.75■■■□□ 2.35
CTF1-201ENST00000279804 CSF1RP07333 972 aa29.75■■■□□ 2.35
CTF1-201ENST00000279804 LMBR1LQ6UX01 489 aa29.75■■■□□ 2.35
CTF1-201ENST00000279804 GPR162Q16538 588 aa29.74■■■□□ 2.35
CTF1-201ENST00000279804 FAM161AQ3B820 660 aa29.74■■■□□ 2.35
CTF1-201ENST00000279804 CELF1Q92879 486 aaKnown RBP29.74■■■□□ 2.35
CTF1-201ENST00000279804 CHMP3Q9Y3E7 222 aa29.74■■■□□ 2.35
CTF1-201ENST00000279804 LRRFIP2Q9Y608 721 aaKnown RBP29.74■■■□□ 2.35
CTF1-201ENST00000279804 ANKRD44Q8N8A2 993 aa29.73■■■□□ 2.35
CTF1-201ENST00000279804 ZBTB7BO15156 539 aaPredicted RBP29.72■■■□□ 2.35
CTF1-201ENST00000279804 GNAI3P08754 354 aa29.72■■■□□ 2.35
CTF1-201ENST00000279804 OLFM4Q6UX06 510 aa29.72■■■□□ 2.35
CTF1-201ENST00000279804 C21orf2O43822 256 aa29.71■■■□□ 2.35
CTF1-201ENST00000279804 GRAPQ13588 217 aa29.71■■■□□ 2.35
CTF1-201ENST00000279804 GRAPLQ8TC17 118 aaPredicted RBP29.71■■■□□ 2.35
CTF1-201ENST00000279804 RTL9Q8NET4 1388 aa29.7■■■□□ 2.35
CTF1-201ENST00000279804 FER1L6Q2WGJ9 1857 aa29.7■■■□□ 2.34
CTF1-201ENST00000279804 PPEF1O14829 653 aaPredicted RBP29.69■■■□□ 2.34
CTF1-201ENST00000279804 ITGA6P23229 1130 aa29.69■■■□□ 2.34
CTF1-201ENST00000279804 LRRC37AA6NMS7 1700 aa29.69■■■□□ 2.34
CTF1-201ENST00000279804 RABL6Q3YEC7 729 aaPredicted RBP29.69■■■□□ 2.34
CTF1-201ENST00000279804 C1orf115Q9H7X2 142 aa29.69■■■□□ 2.34
CTF1-201ENST00000279804 DDX19BQ9UMR2 479 aa29.68■■■□□ 2.34
CTF1-201ENST00000279804 C7orf43Q8WVR3 580 aa29.67■■■□□ 2.34
CTF1-201ENST00000279804 CCDC88AQ3V6T2 1871 aa29.67■■■□□ 2.34
CTF1-201ENST00000279804 GNAI2P04899 355 aa29.66■■■□□ 2.34
CTF1-201ENST00000279804 RPS8P62241 208 aaKnown RBP29.66■■■□□ 2.34
CTF1-201ENST00000279804 BBOX1O75936 387 aa29.66■■■□□ 2.34
CTF1-201ENST00000279804 IFIT5Q13325 482 aaKnown RBP29.65■■■□□ 2.34
CTF1-201ENST00000279804 ZNF594Q96JF6 807 aaPredicted RBP29.65■■■□□ 2.34
CTF1-201ENST00000279804 ANKRD18BA2A2Z9 1011 aa29.64■■■□□ 2.34
CTF1-201ENST00000279804 ANKRD18AQ8IVF6 992 aa29.64■■■□□ 2.34
CTF1-201ENST00000279804 CDC5LQ99459 802 aaKnown RBP29.64■■■□□ 2.34
CTF1-201ENST00000279804 HDAC5Q9UQL6 1122 aa29.64■■■□□ 2.34
CTF1-201ENST00000279804 A0A1B0GUL6 1792 aa29.64■■■□□ 2.34
CTF1-201ENST00000279804 CCDC57Q2TAC2 916 aa29.63■■■□□ 2.33
CTF1-201ENST00000279804 ATP6V0A2Q9Y487 856 aa29.63■■■□□ 2.33
CTF1-201ENST00000279804 SBF1O95248 1867 aa29.62■■■□□ 2.33
CTF1-201ENST00000279804 ARHGAP27Q6ZUM4 889 aa29.61■■■□□ 2.33
CTF1-201ENST00000279804 KLHDC4Q8TBB5 520 aa29.61■■■□□ 2.33
CTF1-201ENST00000279804 SP8Q8IXZ3 490 aa29.6■■■□□ 2.33
CTF1-201ENST00000279804 ZBTB40Q9NUA8 1239 aa29.6■■■□□ 2.33
CTF1-201ENST00000279804 DCAF8L1A6NGE4 600 aa29.6■■■□□ 2.33
CTF1-201ENST00000279804 LTBP1Q14766 1721 aa29.59■■■□□ 2.33
CTF1-201ENST00000279804 SNED1Q8TER0 1413 aa29.59■■■□□ 2.33
CTF1-201ENST00000279804 IGHMBP2P38935 993 aaKnown RBP29.59■■■□□ 2.33
CTF1-201ENST00000279804 GRIN3BO60391 1043 aa29.58■■■□□ 2.33
CTF1-201ENST00000279804 CCDC93Q567U6 631 aa29.58■■■□□ 2.33
CTF1-201ENST00000279804 TAF7LQ5H9L4 462 aa29.58■■■□□ 2.33
CTF1-201ENST00000279804 ERICH6BQ5W0A0 696 aa29.58■■■□□ 2.33
CTF1-201ENST00000279804 RFX5P48382 616 aaPredicted RBP29.57■■■□□ 2.32
CTF1-201ENST00000279804 TMC4Q7Z404 712 aa29.57■■■□□ 2.32
CTF1-201ENST00000279804 MPHOSPH8Q99549 860 aa29.57■■■□□ 2.32
CTF1-201ENST00000279804 BSDC1Q9NW68 430 aaPredicted RBP29.57■■■□□ 2.32
CTF1-201ENST00000279804 PNMA6EA0A0J9YXQ4 647 aa29.56■■■□□ 2.32
CTF1-201ENST00000279804 SRGAP3O43295 1099 aa29.56■■■□□ 2.32
CTF1-201ENST00000279804 RASSF7Q02833 373 aa29.56■■■□□ 2.32
CTF1-201ENST00000279804 CHD4Q14839 1912 aa29.56■■■□□ 2.32
CTF1-201ENST00000279804 NFKBIEO00221 500 aa29.56■■■□□ 2.32
CTF1-201ENST00000279804 MTX1Q13505 466 aa29.56■■■□□ 2.32
CTF1-201ENST00000279804 SOGA3Q5TF21 947 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms