RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 VEGFAP15692 232 aaPredicted RBP22.41■■□□□ 1.18
SEC22C-202ENST00000273156 NUP98P52948 1817 aa22.41■■□□□ 1.18
SEC22C-202ENST00000273156 NLRP10Q86W26 655 aa22.41■■□□□ 1.18
SEC22C-202ENST00000273156 TMX4Q9H1E5 349 aaPredicted RBP22.4■■□□□ 1.18
SEC22C-202ENST00000273156 SBF1O95248 1867 aa22.4■■□□□ 1.18
SEC22C-202ENST00000273156 FSTL1Q12841 308 aa22.39■■□□□ 1.18
SEC22C-202ENST00000273156 TRMT112Q9UI30 125 aaKnown RBP22.39■■□□□ 1.18
SEC22C-202ENST00000273156 SLX4Q8IY92 1834 aa22.39■■□□□ 1.18
SEC22C-202ENST00000273156 SH3TC1Q8TE82 1336 aa22.39■■□□□ 1.17
SEC22C-202ENST00000273156 FLIIQ13045 1269 aa22.39■■□□□ 1.17
SEC22C-202ENST00000273156 CENPQQ7L2Z9 268 aaPredicted RBP22.39■■□□□ 1.17
SEC22C-202ENST00000273156 G2E3Q7L622 706 aa22.39■■□□□ 1.17
SEC22C-202ENST00000273156 PSMD1Q99460 953 aa22.38■■□□□ 1.17
SEC22C-202ENST00000273156 INTS3Q68E01 1043 aaKnown RBP22.37■■□□□ 1.17
SEC22C-202ENST00000273156 ARFGEF2Q9Y6D5 1785 aa22.37■■□□□ 1.17
SEC22C-202ENST00000273156 FKBP5Q13451 457 aaPredicted RBP22.36■■□□□ 1.17
SEC22C-202ENST00000273156 FER1L6Q2WGJ9 1857 aa22.36■■□□□ 1.17
SEC22C-202ENST00000273156 APLP1P51693 650 aa22.35■■□□□ 1.17
SEC22C-202ENST00000273156 TRIM28Q13263 835 aaKnown RBP22.35■■□□□ 1.17
SEC22C-202ENST00000273156 ZBTB40Q9NUA8 1239 aa22.35■■□□□ 1.17
SEC22C-202ENST00000273156 PPEF1O14829 653 aaPredicted RBP22.35■■□□□ 1.17
SEC22C-202ENST00000273156 ZBTB7BO15156 539 aaPredicted RBP22.35■■□□□ 1.17
SEC22C-202ENST00000273156 DDX58O95786 925 aaKnown RBP22.35■■□□□ 1.17
SEC22C-202ENST00000273156 RIC3Q7Z5B4 369 aa22.35■■□□□ 1.17
SEC22C-202ENST00000273156 SMC1BQ8NDV3 1235 aa22.35■■□□□ 1.17
SEC22C-202ENST00000273156 ISCA1Q9BUE6 129 aa22.35■■□□□ 1.17
SEC22C-202ENST00000273156 BBOX1O75936 387 aa22.34■■□□□ 1.17
SEC22C-202ENST00000273156 HSP90B1P14625 803 aaKnown RBP22.34■■□□□ 1.17
SEC22C-202ENST00000273156 SYNE4Q8N205 404 aa22.34■■□□□ 1.17
SEC22C-202ENST00000273156 ZNF277Q9NRM2 450 aaPredicted RBP22.34■■□□□ 1.17
SEC22C-202ENST00000273156 TNRC6CQ9HCJ0 1690 aaKnown RBP22.33■■□□□ 1.17
SEC22C-202ENST00000273156 IARSP41252 1262 aaKnown RBP22.33■■□□□ 1.17
SEC22C-202ENST00000273156 CCT4P50991 539 aaKnown RBP22.33■■□□□ 1.17
SEC22C-202ENST00000273156 PCDHB15Q9Y5E8 787 aa22.33■■□□□ 1.17
SEC22C-202ENST00000273156 OLFM4Q6UX06 510 aa22.32■■□□□ 1.16
SEC22C-202ENST00000273156 C3orf67Q6ZVT6 689 aa22.32■■□□□ 1.16
SEC22C-202ENST00000273156 DDX46Q7L014 1031 aaKnown RBP22.32■■□□□ 1.16
SEC22C-202ENST00000273156 JDP2Q8WYK2 163 aa22.32■■□□□ 1.16
SEC22C-202ENST00000273156 RWDD1Q9H446 243 aaPredicted RBP22.32■■□□□ 1.16
SEC22C-202ENST00000273156 CEP350Q5VT06 3117 aa22.32■■□□□ 1.16
SEC22C-202ENST00000273156 HCLS1P14317 486 aaPredicted RBP22.31■■□□□ 1.16
SEC22C-202ENST00000273156 IQCA1LA6NCM1 817 aa22.31■■□□□ 1.16
SEC22C-202ENST00000273156 SLC4A10Q6U841 1118 aa22.31■■□□□ 1.16
SEC22C-202ENST00000273156 TMC4Q7Z404 712 aa22.31■■□□□ 1.16
SEC22C-202ENST00000273156 PHAXQ9H814 394 aaKnown RBP22.31■■□□□ 1.16
SEC22C-202ENST00000273156 ATP6V0A2Q9Y487 856 aa22.31■■□□□ 1.16
SEC22C-202ENST00000273156 F6X3S4 739 aa22.3■■□□□ 1.16
SEC22C-202ENST00000273156 VPS33BQ9H267 617 aa22.3■■□□□ 1.16
SEC22C-202ENST00000273156 TIAM2Q8IVF5 1701 aa22.29■■□□□ 1.16
SEC22C-202ENST00000273156 ATP5J2-PTCD1G3V325 749 aa22.29■■□□□ 1.16
SEC22C-202ENST00000273156 DDNO94850 711 aaPredicted RBP22.28■■□□□ 1.16
SEC22C-202ENST00000273156 IGHDP01880 384 aa22.28■■□□□ 1.16
SEC22C-202ENST00000273156 SUPT20HQ8NEM7 779 aa22.28■■□□□ 1.16
SEC22C-202ENST00000273156 L3MBTL3Q96JM7 780 aaPredicted RBP22.28■■□□□ 1.16
SEC22C-202ENST00000273156 CCDC191Q8NCU4 936 aa22.28■■□□□ 1.16
SEC22C-202ENST00000273156 SNED1Q8TER0 1413 aa22.28■■□□□ 1.16
SEC22C-202ENST00000273156 FAM89AQ96GI7 184 aa22.28■■□□□ 1.16
SEC22C-202ENST00000273156 POTECB2RU33 542 aa22.27■■□□□ 1.16
SEC22C-202ENST00000273156 FZD9O00144 591 aa22.27■■□□□ 1.16
SEC22C-202ENST00000273156 GRAPQ13588 217 aa22.27■■□□□ 1.16
SEC22C-202ENST00000273156 SP8Q8IXZ3 490 aa22.27■■□□□ 1.16
SEC22C-202ENST00000273156 ZBTB38Q8NAP3 1195 aaPredicted RBP22.27■■□□□ 1.16
SEC22C-202ENST00000273156 GRAPLQ8TC17 118 aaPredicted RBP22.27■■□□□ 1.16
SEC22C-202ENST00000273156 SF3B3Q15393 1217 aaKnown RBP22.26■■□□□ 1.15
SEC22C-202ENST00000273156 ANKRD36CQ5JPF3 1778 aa22.26■■□□□ 1.15
SEC22C-202ENST00000273156 CACNA1SQ13698 1873 aa22.25■■□□□ 1.15
SEC22C-202ENST00000273156 DICER1Q9UPY3 1922 aaKnown RBP22.25■■□□□ 1.15
SEC22C-202ENST00000273156 WDR90Q96KV7 1748 aa22.25■■□□□ 1.15
SEC22C-202ENST00000273156 HDAC1Q13547 482 aaPredicted RBP22.25■■□□□ 1.15
SEC22C-202ENST00000273156 LARGE2Q8N3Y3 721 aa22.25■■□□□ 1.15
SEC22C-202ENST00000273156 METTL22Q9BUU2 404 aaPredicted RBP22.25■■□□□ 1.15
SEC22C-202ENST00000273156 IRS4O14654 1257 aaPredicted RBP22.24■■□□□ 1.15
SEC22C-202ENST00000273156 EIF6P56537 245 aaKnown RBP22.24■■□□□ 1.15
SEC22C-202ENST00000273156 GPC2Q8N158 579 aa22.24■■□□□ 1.15
SEC22C-202ENST00000273156 MYD88Q99836 296 aa22.24■■□□□ 1.15
SEC22C-202ENST00000273156 CCDC88AQ3V6T2 1871 aa22.24■■□□□ 1.15
SEC22C-202ENST00000273156 CACNA1FO60840 1977 aa22.24■■□□□ 1.15
SEC22C-202ENST00000273156 DPP8Q6V1X1 898 aaPredicted RBP22.24■■□□□ 1.15
SEC22C-202ENST00000273156 KSR2Q6VAB6 950 aa22.24■■□□□ 1.15
SEC22C-202ENST00000273156 DNAAF4Q8WXU2 420 aa22.24■■□□□ 1.15
SEC22C-202ENST00000273156 CWC25Q9NXE8 425 aaPredicted RBP22.24■■□□□ 1.15
SEC22C-202ENST00000273156 PI4KAP2A4QPH2 592 aa22.23■■□□□ 1.15
SEC22C-202ENST00000273156 NEXNQ0ZGT2 675 aa22.23■■□□□ 1.15
SEC22C-202ENST00000273156 PI4KAP1Q8N8J0 262 aa22.23■■□□□ 1.15
SEC22C-202ENST00000273156 RTFDC1Q9BY42 306 aaPredicted RBP22.23■■□□□ 1.15
SEC22C-202ENST00000273156 NIM1KQ8IY84 436 aa22.22■■□□□ 1.15
SEC22C-202ENST00000273156 MPNDQ8N594 471 aa22.22■■□□□ 1.15
SEC22C-202ENST00000273156 MAP3K2Q9Y2U5 619 aa22.22■■□□□ 1.15
SEC22C-202ENST00000273156 PPIP5K2O43314 1243 aa22.21■■□□□ 1.15
SEC22C-202ENST00000273156 PCCAP05165 728 aaPredicted RBP22.21■■□□□ 1.15
SEC22C-202ENST00000273156 SRCIN1Q9C0H9 1055 aa22.21■■□□□ 1.15
SEC22C-202ENST00000273156 HACL1Q9UJ83 578 aa22.21■■□□□ 1.15
SEC22C-202ENST00000273156 ZNF541Q9H0D2 1346 aa22.21■■□□□ 1.15
SEC22C-202ENST00000273156 GNAI3P08754 354 aa22.2■■□□□ 1.15
SEC22C-202ENST00000273156 RTL5Q5HYW3 569 aaPredicted RBP22.2■■□□□ 1.15
SEC22C-202ENST00000273156 CHADLQ6NUI6 762 aa22.2■■□□□ 1.14
SEC22C-202ENST00000273156 PNMA8AQ86V59 439 aaPredicted RBP22.2■■□□□ 1.14
SEC22C-202ENST00000273156 MEIS3Q99687 375 aa22.2■■□□□ 1.14
SEC22C-202ENST00000273156 TAF1DQ9H5J8 278 aaPredicted RBP22.2■■□□□ 1.14
SEC22C-202ENST00000273156 C1orf115Q9H7X2 142 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms