RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 AACSQ86V21 672 aa10.19□□□□□ -0.78
COPS4-201ENST00000264389 AK7Q96M32 723 aa10.19□□□□□ -0.78
COPS4-201ENST00000264389 NIP7Q9Y221 180 aaKnown RBP eCLIP10.19□□□□□ -0.78
COPS4-201ENST00000264389 ZBTB12Q9Y330 459 aaPredicted RBP10.19□□□□□ -0.78
COPS4-201ENST00000264389 RTCBQ9Y3I0 505 aaKnown RBP10.19□□□□□ -0.78
COPS4-201ENST00000264389 TTC41PQ6P2S7 1318 aa10.18□□□□□ -0.78
COPS4-201ENST00000264389 IRS4O14654 1257 aaPredicted RBP10.18□□□□□ -0.78
COPS4-201ENST00000264389 RGL2O15211 777 aa10.18□□□□□ -0.78
COPS4-201ENST00000264389 CCDC57Q2TAC2 916 aa10.18□□□□□ -0.78
COPS4-201ENST00000264389 CASC1Q6TDU7 716 aa10.18□□□□□ -0.78
COPS4-201ENST00000264389 CLEC4GQ6UXB4 293 aa10.18□□□□□ -0.78
COPS4-201ENST00000264389 TBC1D9Q6ZT07 1266 aa10.18□□□□□ -0.78
COPS4-201ENST00000264389 SH3TC1Q8TE82 1336 aa10.18□□□□□ -0.78
COPS4-201ENST00000264389 UTP14AQ9BVJ6 771 aaKnown RBP10.18□□□□□ -0.78
COPS4-201ENST00000264389 USP42Q9H9J4 1324 aaKnown RBP10.18□□□□□ -0.78
COPS4-201ENST00000264389 ZNF609O15014 1411 aa10.17□□□□□ -0.78
COPS4-201ENST00000264389 FAM177BA6PVY3 158 aa10.17□□□□□ -0.78
COPS4-201ENST00000264389 PDE8AO60658 829 aa10.17□□□□□ -0.78
COPS4-201ENST00000264389 EIF5BO60841 1220 aaKnown RBP10.17□□□□□ -0.78
COPS4-201ENST00000264389 SDSP20132 328 aa10.17□□□□□ -0.78
COPS4-201ENST00000264389 CTSWP56202 376 aa10.17□□□□□ -0.78
COPS4-201ENST00000264389 TAF7LQ5H9L4 462 aa10.17□□□□□ -0.78
COPS4-201ENST00000264389 SLC27A3Q5K4L6 730 aa10.17□□□□□ -0.78
COPS4-201ENST00000264389 SUSD4Q5VX71 490 aa10.17□□□□□ -0.78
COPS4-201ENST00000264389 NARFQ9UHQ1 456 aa10.17□□□□□ -0.78
COPS4-201ENST00000264389 MYH7P12883 1935 aa10.17□□□□□ -0.78
COPS4-201ENST00000264389 TRIM6-TRIM34B2RNG4 842 aa10.16□□□□□ -0.78
COPS4-201ENST00000264389 ERC2O15083 957 aa10.16□□□□□ -0.78
COPS4-201ENST00000264389 ZPR1O75312 459 aa10.16□□□□□ -0.78
COPS4-201ENST00000264389 HSP90B1P14625 803 aaKnown RBP10.16□□□□□ -0.78
COPS4-201ENST00000264389 SYNE4Q8N205 404 aa10.16□□□□□ -0.78
COPS4-201ENST00000264389 PI4K2BQ8TCG2 481 aa10.16□□□□□ -0.78
COPS4-201ENST00000264389 CCDC85AQ96PX6 553 aaPredicted RBP10.16□□□□□ -0.78
COPS4-201ENST00000264389 TAF1P21675 1872 aa10.16□□□□□ -0.78
COPS4-201ENST00000264389 TNRC6CQ9HCJ0 1690 aaKnown RBP10.16□□□□□ -0.78
COPS4-201ENST00000264389 EYA2O00167 538 aa10.16□□□□□ -0.78
COPS4-201ENST00000264389 GLRX3O76003 335 aaKnown RBP10.16□□□□□ -0.78
COPS4-201ENST00000264389 CIAO1O76071 339 aa10.16□□□□□ -0.78
COPS4-201ENST00000264389 PHF14O94880 888 aa10.16□□□□□ -0.78
COPS4-201ENST00000264389 NTSR2O95665 410 aa10.16□□□□□ -0.78
COPS4-201ENST00000264389 CSF1RP07333 972 aa10.16□□□□□ -0.78
COPS4-201ENST00000264389 IL15P40933 162 aaPredicted RBP10.16□□□□□ -0.78
COPS4-201ENST00000264389 TFCP2Q12800 502 aa10.16□□□□□ -0.78
COPS4-201ENST00000264389 IFIT5Q13325 482 aaKnown RBP10.16□□□□□ -0.78
COPS4-201ENST00000264389 USPL1Q5W0Q7 1092 aa10.16□□□□□ -0.78
COPS4-201ENST00000264389 RILPL2Q969X0 211 aa10.16□□□□□ -0.78
COPS4-201ENST00000264389 EAF2Q96CJ1 260 aaPredicted RBP10.16□□□□□ -0.78
COPS4-201ENST00000264389 DDRGK1Q96HY6 314 aa10.16□□□□□ -0.78
COPS4-201ENST00000264389 ZNF594Q96JF6 807 aaPredicted RBP10.16□□□□□ -0.78
COPS4-201ENST00000264389 LRRC4BQ9NT99 713 aa10.16□□□□□ -0.78
COPS4-201ENST00000264389 ECHDC1Q9NTX5 307 aa10.16□□□□□ -0.78
COPS4-201ENST00000264389 RIC1Q4ADV7 1423 aa10.15□□□□□ -0.78
COPS4-201ENST00000264389 ANKRD18BA2A2Z9 1011 aa10.15□□□□□ -0.78
COPS4-201ENST00000264389 ITGA6P23229 1130 aa10.15□□□□□ -0.78
COPS4-201ENST00000264389 HMGB2P26583 209 aaKnown RBP10.15□□□□□ -0.78
COPS4-201ENST00000264389 TNNI3KQ59H18 835 aa10.15□□□□□ -0.78
COPS4-201ENST00000264389 SMIM5Q71RC9 77 aa10.15□□□□□ -0.78
COPS4-201ENST00000264389 CNTROBQ8N137 903 aa10.15□□□□□ -0.78
COPS4-201ENST00000264389 TTLL11Q8NHH1 800 aa10.15□□□□□ -0.78
COPS4-201ENST00000264389 TBC1D32Q96NH3 1257 aa10.15□□□□□ -0.78
COPS4-201ENST00000264389 GREM2Q9H772 168 aa10.15□□□□□ -0.78
COPS4-201ENST00000264389 SRP68Q9UHB9 627 aaKnown RBP10.15□□□□□ -0.78
COPS4-201ENST00000264389 FBXO3Q9UK99 471 aa10.15□□□□□ -0.78
COPS4-201ENST00000264389 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.15□□□□□ -0.78
COPS4-201ENST00000264389 FPGT-TNNI3KV9GXZ4 949 aa10.15□□□□□ -0.78
COPS4-201ENST00000264389 QSER1Q2KHR3 1735 aa10.15□□□□□ -0.79
COPS4-201ENST00000264389 TRAPPC3LQ5T215 181 aa10.14□□□□□ -0.79
COPS4-201ENST00000264389 BICDL1Q6ZP65 573 aa10.14□□□□□ -0.79
COPS4-201ENST00000264389 ATG9AQ7Z3C6 839 aa10.14□□□□□ -0.79
COPS4-201ENST00000264389 CCDC8Q9H0W5 538 aaPredicted RBP10.14□□□□□ -0.79
COPS4-201ENST00000264389 TLR7Q9NYK1 1049 aaKnown RBP10.14□□□□□ -0.79
COPS4-201ENST00000264389 MYH13Q9UKX3 1938 aa10.14□□□□□ -0.79
COPS4-201ENST00000264389 HCLS1P14317 486 aaPredicted RBP10.13□□□□□ -0.79
COPS4-201ENST00000264389 RFC4P35249 363 aa10.13□□□□□ -0.79
COPS4-201ENST00000264389 TXNRD1Q16881 649 aa10.13□□□□□ -0.79
COPS4-201ENST00000264389 LRRC24Q50LG9 513 aa10.13□□□□□ -0.79
COPS4-201ENST00000264389 TBC1D9BQ66K14 1250 aa10.13□□□□□ -0.79
COPS4-201ENST00000264389 AMIGO3Q86WK7 504 aa10.13□□□□□ -0.79
COPS4-201ENST00000264389 ARHGEF1Q92888 912 aaKnown RBP10.13□□□□□ -0.79
COPS4-201ENST00000264389 IPO9Q96P70 1041 aaKnown RBP10.13□□□□□ -0.79
COPS4-201ENST00000264389 C22orf23Q9BZE7 217 aa10.13□□□□□ -0.79
COPS4-201ENST00000264389 NYXQ9GZU5 481 aa10.13□□□□□ -0.79
COPS4-201ENST00000264389 BCL2L12Q9HB09 334 aa10.13□□□□□ -0.79
COPS4-201ENST00000264389 RGS17Q9UGC6 210 aaPredicted RBP10.13□□□□□ -0.79
COPS4-201ENST00000264389 MAP4K4O95819 1239 aaPredicted RBP10.13□□□□□ -0.79
COPS4-201ENST00000264389 SETDB2Q96T68 719 aa10.13□□□□□ -0.79
COPS4-201ENST00000264389 PUS3Q9BZE2 481 aaKnown RBP10.13□□□□□ -0.79
COPS4-201ENST00000264389 GPR108Q9NPR9 543 aa10.13□□□□□ -0.79
COPS4-201ENST00000264389 CARMIL3Q8ND23 1372 aa10.12□□□□□ -0.79
COPS4-201ENST00000264389 RTL9Q8NET4 1388 aa10.12□□□□□ -0.79
COPS4-201ENST00000264389 ABCC12Q96J65 1359 aa10.12□□□□□ -0.79
COPS4-201ENST00000264389 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.12□□□□□ -0.79
COPS4-201ENST00000264389 APBA3O96018 575 aa10.12□□□□□ -0.79
COPS4-201ENST00000264389 SSFA2P28290 1259 aa10.12□□□□□ -0.79
COPS4-201ENST00000264389 GTF2E1P29083 439 aaPredicted RBP10.12□□□□□ -0.79
COPS4-201ENST00000264389 CCDC152Q4G0S7 254 aa10.12□□□□□ -0.79
COPS4-201ENST00000264389 POTEAQ6S8J7 498 aa10.12□□□□□ -0.79
COPS4-201ENST00000264389 CEP126Q9P2H0 1117 aa10.12□□□□□ -0.79
COPS4-201ENST00000264389 DBNLQ9UJU6 430 aaKnown RBP10.12□□□□□ -0.79
COPS4-201ENST00000264389 COL4A1P02462 1669 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms