RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 CCDC50Q8IVM0 306 aa17.22■□□□□ 0.35
NID1-201ENST00000264187 NUDT16Q96DE0 195 aaKnown RBP17.22■□□□□ 0.35
NID1-201ENST00000264187 ZEB2O60315 1214 aa17.22■□□□□ 0.35
NID1-201ENST00000264187 STAT6P42226 847 aa17.22■□□□□ 0.35
NID1-201ENST00000264187 PDE4BQ07343 736 aa17.22■□□□□ 0.35
NID1-201ENST00000264187 ZMYND15Q9H091 742 aa17.22■□□□□ 0.35
NID1-201ENST00000264187 MARCKSP29966 332 aaPredicted RBP17.21■□□□□ 0.35
NID1-201ENST00000264187 CCDC186Q7Z3E2 898 aa17.21■□□□□ 0.35
NID1-201ENST00000264187 FAM212AQ96EL1 285 aa17.21■□□□□ 0.35
NID1-201ENST00000264187 TLDC2A0PJX2 215 aa17.21■□□□□ 0.35
NID1-201ENST00000264187 IGSF3O75054 1194 aa17.21■□□□□ 0.35
NID1-201ENST00000264187 UBE2HP62256 183 aa17.21■□□□□ 0.35
NID1-201ENST00000264187 GRM1Q13255 1194 aa17.21■□□□□ 0.35
NID1-201ENST00000264187 MAP7D1Q3KQU3 841 aa17.21■□□□□ 0.35
NID1-201ENST00000264187 SLF2Q8IX21 1173 aa17.21■□□□□ 0.35
NID1-201ENST00000264187 CNPY2Q9Y2B0 182 aa17.21■□□□□ 0.35
NID1-201ENST00000264187 CYLC1P35663 651 aaPredicted RBP17.21■□□□□ 0.34
NID1-201ENST00000264187 KANK3Q6NY19 840 aa17.21■□□□□ 0.34
NID1-201ENST00000264187 BRF1Q92994 677 aa17.21■□□□□ 0.34
NID1-201ENST00000264187 MAP3K2Q9Y2U5 619 aa17.21■□□□□ 0.34
NID1-201ENST00000264187 NCOA7Q8NI08 942 aa17.2■□□□□ 0.34
NID1-201ENST00000264187 PLVAPQ9BX97 442 aa17.2■□□□□ 0.34
NID1-201ENST00000264187 KLF18A0A0U1RQI7 1052 aa17.2■□□□□ 0.34
NID1-201ENST00000264187 CCDC25Q86WR0 208 aa17.2■□□□□ 0.34
NID1-201ENST00000264187 ECHDC1Q9NTX5 307 aa17.2■□□□□ 0.34
NID1-201ENST00000264187 IQSEC3Q9UPP2 1182 aaPredicted RBP17.2■□□□□ 0.34
NID1-201ENST00000264187 SELENOOQ9BVL4 669 aa17.2■□□□□ 0.34
NID1-201ENST00000264187 CCDC171Q6TFL3 1326 aa17.2■□□□□ 0.34
NID1-201ENST00000264187 VTI1AQ96AJ9 217 aa17.2■□□□□ 0.34
NID1-201ENST00000264187 RASAL2Q9UJF2 1139 aa17.2■□□□□ 0.34
NID1-201ENST00000264187 CAPN2P17655 700 aa17.19■□□□□ 0.34
NID1-201ENST00000264187 FAM160A1Q05DH4 1040 aa17.19■□□□□ 0.34
NID1-201ENST00000264187 AOPEPQ8N6M6 819 aa17.19■□□□□ 0.34
NID1-201ENST00000264187 UTP14AQ9BVJ6 771 aaKnown RBP17.19■□□□□ 0.34
NID1-201ENST00000264187 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.19■□□□□ 0.342e-6■□□□□ 11.1
NID1-201ENST00000264187 MAP3K9P80192 1104 aa17.19■□□□□ 0.34
NID1-201ENST00000264187 WAPLQ7Z5K2 1190 aa17.19■□□□□ 0.34
NID1-201ENST00000264187 RPGRIP1LQ68CZ1 1315 aa17.19■□□□□ 0.34
NID1-201ENST00000264187 DYNC1I1O14576 645 aa17.19■□□□□ 0.34
NID1-201ENST00000264187 CCDC172P0C7W6 258 aa17.19■□□□□ 0.34
NID1-201ENST00000264187 HEATR3Q7Z4Q2 680 aa17.19■□□□□ 0.34
NID1-201ENST00000264187 IFT81Q8WYA0 676 aa17.19■□□□□ 0.34
NID1-201ENST00000264187 ANAPC4Q9UJX5 808 aa17.19■□□□□ 0.34
NID1-201ENST00000264187 DDX46Q7L014 1031 aaKnown RBP17.19■□□□□ 0.34
NID1-201ENST00000264187 CCDC77Q9BR77 488 aa17.19■□□□□ 0.34
NID1-201ENST00000264187 F8W031 263 aaPredicted RBP17.19■□□□□ 0.34
NID1-201ENST00000264187 CCDC121Q6ZUS5 278 aa17.19■□□□□ 0.34
NID1-201ENST00000264187 KARSQ15046 597 aaKnown RBP17.18■□□□□ 0.34
NID1-201ENST00000264187 TCHPQ9BT92 498 aa17.18■□□□□ 0.34
NID1-201ENST00000264187 KCNK9Q9NPC2 374 aa17.18■□□□□ 0.34
NID1-201ENST00000264187 VPS18Q9P253 973 aa17.18■□□□□ 0.34
NID1-201ENST00000264187 CEP83Q9Y592 693 aa17.18■□□□□ 0.34
NID1-201ENST00000264187 ANKLE2Q86XL3 938 aa17.18■□□□□ 0.34
NID1-201ENST00000264187 DNAJC25Q9H1X3 360 aa17.18■□□□□ 0.34
NID1-201ENST00000264187 SH3BP5O60239 455 aa17.18■□□□□ 0.34
NID1-201ENST00000264187 ASIC1P78348 528 aa17.18■□□□□ 0.34
NID1-201ENST00000264187 NOLC1Q14978 699 aaKnown RBP eCLIP17.18■□□□□ 0.343e-8■□□□□ 10.8
NID1-201ENST00000264187 ZNF622Q969S3 477 aaKnown RBP eCLIP17.18■□□□□ 0.34
NID1-201ENST00000264187 RMND1Q9NWS8 449 aa17.18■□□□□ 0.34
NID1-201ENST00000264187 ANKS4BQ8N8V4 417 aa17.17■□□□□ 0.34
NID1-201ENST00000264187 HLA-DOAP06340 250 aa17.17■□□□□ 0.34
NID1-201ENST00000264187 UBE3BQ7Z3V4 1068 aa17.17■□□□□ 0.34
NID1-201ENST00000264187 RHOXF2BP0C7M4 288 aa17.17■□□□□ 0.34
NID1-201ENST00000264187 FLIIQ13045 1269 aa17.17■□□□□ 0.34
NID1-201ENST00000264187 PLS1Q14651 629 aa17.17■□□□□ 0.34
NID1-201ENST00000264187 NME9Q86XW9 330 aa17.17■□□□□ 0.34
NID1-201ENST00000264187 RHOXF2Q9BQY4 288 aa17.17■□□□□ 0.34
NID1-201ENST00000264187 CLGNO14967 610 aa17.17■□□□□ 0.34
NID1-201ENST00000264187 BAG3O95817 575 aa17.17■□□□□ 0.34
NID1-201ENST00000264187 WTAPQ15007 396 aa17.17■□□□□ 0.34
NID1-201ENST00000264187 SMC1BQ8NDV3 1235 aa17.17■□□□□ 0.34
NID1-201ENST00000264187 PPP1R9BQ96SB3 815 aa17.17■□□□□ 0.34
NID1-201ENST00000264187 ALG1Q9BT22 464 aa17.17■□□□□ 0.34
NID1-201ENST00000264187 EMILIN1Q9Y6C2 1016 aa17.17■□□□□ 0.34
NID1-201ENST00000264187 SYT1P21579 422 aa17.16■□□□□ 0.34
NID1-201ENST00000264187 RPUSD2Q8IZ73 545 aaKnown RBP17.16■□□□□ 0.34
NID1-201ENST00000264187 ANXA1P04083 346 aa17.16■□□□□ 0.34
NID1-201ENST00000264187 TMCO4Q5TGY1 634 aa17.16■□□□□ 0.34
NID1-201ENST00000264187 LZTFL1Q9NQ48 299 aa17.16■□□□□ 0.34
NID1-201ENST00000264187 TACC1O75410 805 aa17.16■□□□□ 0.34
NID1-201ENST00000264187 TSPY3P0CV98 308 aa17.16■□□□□ 0.34
NID1-201ENST00000264187 TSPY8P0CW00 308 aa17.16■□□□□ 0.34
NID1-201ENST00000264187 DHX58Q96C10 678 aa17.16■□□□□ 0.34
NID1-201ENST00000264187 PRIMPOLQ96LW4 560 aa17.16■□□□□ 0.34
NID1-201ENST00000264187 GUCA1BQ9UMX6 200 aa17.16■□□□□ 0.34
NID1-201ENST00000264187 NBPF7P0C2Y1 421 aaPredicted RBP17.16■□□□□ 0.34
NID1-201ENST00000264187 CPLX4Q7Z7G2 160 aa17.16■□□□□ 0.34
NID1-201ENST00000264187 DDX12PQ92771 950 aa17.16■□□□□ 0.34
NID1-201ENST00000264187 LRRC27Q9C0I9 530 aa17.16■□□□□ 0.34
NID1-201ENST00000264187 SBNO2Q9Y2G9 1366 aa17.16■□□□□ 0.34
NID1-201ENST00000264187 WIZO95785 1651 aa17.16■□□□□ 0.34
NID1-201ENST00000264187 OPA1O60313 960 aa17.16■□□□□ 0.34
NID1-201ENST00000264187 STX17P56962 302 aa17.16■□□□□ 0.34
NID1-201ENST00000264187 PPARDQ03181 441 aa17.16■□□□□ 0.34
NID1-201ENST00000264187 NAA25Q14CX7 972 aa17.16■□□□□ 0.34
NID1-201ENST00000264187 ERMNQ8TAM6 284 aa17.16■□□□□ 0.34
NID1-201ENST00000264187 CALM1P0DP23 149 aa17.15■□□□□ 0.34
NID1-201ENST00000264187 CALM2P0DP24 149 aa17.15■□□□□ 0.34
NID1-201ENST00000264187 CALM3P0DP25 149 aa17.15■□□□□ 0.34
NID1-201ENST00000264187 LMOD1P29536 600 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms