RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 TICAM2Q86XR7 235 aa18.24■□□□□ 0.51
SHANK3-201ENST00000262795 MRVI1Q9Y6F6 885 aa18.24■□□□□ 0.51
SHANK3-201ENST00000262795 CCDC192P0DO97 292 aa18.24■□□□□ 0.51
SHANK3-201ENST00000262795 MAGEB6P1A0A0J9YX57 407 aa18.24■□□□□ 0.51
SHANK3-201ENST00000262795 MTERF4Q7Z6M4 381 aaKnown RBP18.24■□□□□ 0.51
SHANK3-201ENST00000262795 STX6O43752 255 aa18.24■□□□□ 0.51
SHANK3-201ENST00000262795 MCM9Q9NXL9 1143 aa18.24■□□□□ 0.51
SHANK3-201ENST00000262795 RRP9O43818 475 aaKnown RBP18.23■□□□□ 0.51
SHANK3-201ENST00000262795 CETN1Q12798 172 aa18.23■□□□□ 0.51
SHANK3-201ENST00000262795 TMCO5BA8MYB1 307 aa18.23■□□□□ 0.51
SHANK3-201ENST00000262795 ANO3Q9BYT9 981 aa18.23■□□□□ 0.51
SHANK3-201ENST00000262795 TMEM110-MUSTN1A8MSY1 372 aa18.23■□□□□ 0.51
SHANK3-201ENST00000262795 CBFA2T2O43439 604 aa18.23■□□□□ 0.51
SHANK3-201ENST00000262795 GLRX3O76003 335 aaKnown RBP18.23■□□□□ 0.51
SHANK3-201ENST00000262795 TTC21AQ8NDW8 1320 aa18.23■□□□□ 0.51
SHANK3-201ENST00000262795 B4DLN1 442 aa18.23■□□□□ 0.51
SHANK3-201ENST00000262795 MRPL12P52815 198 aaKnown RBP18.23■□□□□ 0.51
SHANK3-201ENST00000262795 PTPDC1A2A3K4 754 aa18.23■□□□□ 0.51
SHANK3-201ENST00000262795 MYCLP12524 364 aaPredicted RBP18.23■□□□□ 0.51
SHANK3-201ENST00000262795 RAB11FIP3O75154 756 aa18.22■□□□□ 0.51
SHANK3-201ENST00000262795 NIM1KQ8IY84 436 aa18.22■□□□□ 0.51
SHANK3-201ENST00000262795 TOPBP1Q92547 1522 aa18.22■□□□□ 0.51
SHANK3-201ENST00000262795 RNF169Q8NCN4 708 aa18.22■□□□□ 0.51
SHANK3-201ENST00000262795 CDCA7Q9BWT1 371 aaPredicted RBP18.22■□□□□ 0.51
SHANK3-201ENST00000262795 ERICH3Q5RHP9 1530 aa18.22■□□□□ 0.51
SHANK3-201ENST00000262795 LRRC2Q9BYS8 371 aa18.22■□□□□ 0.51
SHANK3-201ENST00000262795 NAPAP54920 295 aa18.22■□□□□ 0.51
SHANK3-201ENST00000262795 MAGEB6Q8N7X4 407 aa18.22■□□□□ 0.51
SHANK3-201ENST00000262795 NACA2Q9H009 215 aa18.22■□□□□ 0.51
SHANK3-201ENST00000262795 DDX39AO00148 427 aaKnown RBP18.22■□□□□ 0.51
SHANK3-201ENST00000262795 GADL1Q6ZQY3 521 aa18.22■□□□□ 0.51
SHANK3-201ENST00000262795 CCDC91Q7Z6B0 441 aa18.22■□□□□ 0.51
SHANK3-201ENST00000262795 SPDYE3A6NKU9 549 aa18.21■□□□□ 0.51
SHANK3-201ENST00000262795 NUP88Q99567 741 aaPredicted RBP18.21■□□□□ 0.51
SHANK3-201ENST00000262795 QTRT2Q9H974 415 aaKnown RBP18.21■□□□□ 0.51
SHANK3-201ENST00000262795 METAP2P50579 478 aaKnown RBP eCLIP18.21■□□□□ 0.51
SHANK3-201ENST00000262795 FAM182BQ5T319 152 aa18.21■□□□□ 0.51
SHANK3-201ENST00000262795 SH3BP5O60239 455 aa18.21■□□□□ 0.51
SHANK3-201ENST00000262795 DPP8Q6V1X1 898 aaPredicted RBP18.21■□□□□ 0.51
SHANK3-201ENST00000262795 KIAA1107Q9UPP5 1409 aa18.21■□□□□ 0.51
SHANK3-201ENST00000262795 IRS4O14654 1257 aaPredicted RBP18.21■□□□□ 0.51
SHANK3-201ENST00000262795 LDHBP07195 334 aaKnown RBP18.21■□□□□ 0.51
SHANK3-201ENST00000262795 GPCPD1Q9NPB8 672 aa18.21■□□□□ 0.51
SHANK3-201ENST00000262795 WDR33Q9C0J8 1336 aaKnown RBP18.21■□□□□ 0.51
SHANK3-201ENST00000262795 WDR63Q8IWG1 891 aa18.21■□□□□ 0.51
SHANK3-201ENST00000262795 NOP56O00567 594 aaKnown RBP18.21■□□□□ 0.5
SHANK3-201ENST00000262795 CHMP2AO43633 222 aa18.21■□□□□ 0.5
SHANK3-201ENST00000262795 STXBP4Q6ZWJ1 553 aa18.21■□□□□ 0.5
SHANK3-201ENST00000262795 VPS36Q86VN1 386 aa18.21■□□□□ 0.5
SHANK3-201ENST00000262795 SMC1AQ14683 1233 aaKnown RBP18.2■□□□□ 0.5
SHANK3-201ENST00000262795 BIN1O00499 593 aa18.2■□□□□ 0.5
SHANK3-201ENST00000262795 TROQ12816 1431 aaPredicted RBP18.2■□□□□ 0.5
SHANK3-201ENST00000262795 GOLGA6L10A0A0M3HER8 536 aa18.2■□□□□ 0.5
SHANK3-201ENST00000262795 FLIIQ13045 1269 aa18.2■□□□□ 0.5
SHANK3-201ENST00000262795 KMT5BQ4FZB7 885 aa18.2■□□□□ 0.5
SHANK3-201ENST00000262795 TRIM6Q9C030 488 aaPredicted RBP18.2■□□□□ 0.5
SHANK3-201ENST00000262795 USP16Q9Y5T5 823 aa18.2■□□□□ 0.5
SHANK3-201ENST00000262795 H7C1D1 291 aa18.2■□□□□ 0.5
SHANK3-201ENST00000262795 CNNM3Q8NE01 707 aa18.2■□□□□ 0.5
SHANK3-201ENST00000262795 NOS1P29475 1434 aa18.19■□□□□ 0.5
SHANK3-201ENST00000262795 HFM1A2PYH4 1435 aa18.19■□□□□ 0.5
SHANK3-201ENST00000262795 BRD4O60885 1362 aaPredicted RBP18.19■□□□□ 0.5
SHANK3-201ENST00000262795 CCP110O43303 1012 aa18.19■□□□□ 0.5
SHANK3-201ENST00000262795 WTAPQ15007 396 aa18.19■□□□□ 0.5
SHANK3-201ENST00000262795 MAEAQ7L5Y9 396 aa18.19■□□□□ 0.5
SHANK3-201ENST00000262795 NUP62CLQ9H1M0 184 aa18.19■□□□□ 0.5
SHANK3-201ENST00000262795 ZRANB1Q9UGI0 708 aa18.19■□□□□ 0.5
SHANK3-201ENST00000262795 PPIP5K2O43314 1243 aa18.19■□□□□ 0.5
SHANK3-201ENST00000262795 CPXCR1Q8N123 301 aa18.19■□□□□ 0.5
SHANK3-201ENST00000262795 RNF34Q969K3 372 aa18.19■□□□□ 0.5
SHANK3-201ENST00000262795 KIF14Q15058 1648 aa18.18■□□□□ 0.5
SHANK3-201ENST00000262795 HCLS1P14317 486 aaPredicted RBP18.18■□□□□ 0.5
SHANK3-201ENST00000262795 FANCAO15360 1455 aa18.18■□□□□ 0.5
SHANK3-201ENST00000262795 PLB1Q6P1J6 1458 aa18.18■□□□□ 0.5
SHANK3-201ENST00000262795 GIMAP7Q8NHV1 300 aa18.18■□□□□ 0.5
SHANK3-201ENST00000262795 RXRBP28702 533 aa18.18■□□□□ 0.5
SHANK3-201ENST00000262795 TRIM37O94972 964 aa18.18■□□□□ 0.5
SHANK3-201ENST00000262795 BRDTQ58F21 947 aaPredicted RBP18.17■□□□□ 0.5
SHANK3-201ENST00000262795 FERMT1Q9BQL6 677 aa18.17■□□□□ 0.5
SHANK3-201ENST00000262795 SUPT6HQ7KZ85 1726 aaKnown RBP18.17■□□□□ 0.5
SHANK3-201ENST00000262795 ZBTB24O43167 697 aaPredicted RBP18.17■□□□□ 0.5
SHANK3-201ENST00000262795 FCHSD1Q86WN1 690 aa18.17■□□□□ 0.5
SHANK3-201ENST00000262795 PRKAG2Q9UGJ0 569 aa18.17■□□□□ 0.5
SHANK3-201ENST00000262795 IARSP41252 1262 aaKnown RBP18.17■□□□□ 0.5
SHANK3-201ENST00000262795 GTF3C6Q969F1 213 aa18.17■□□□□ 0.5
SHANK3-201ENST00000262795 TSNARE1Q96NA8 513 aa18.17■□□□□ 0.5
SHANK3-201ENST00000262795 UBA7P41226 1012 aa18.17■□□□□ 0.5
SHANK3-201ENST00000262795 ZSCAN31Q96LW9 406 aaPredicted RBP18.17■□□□□ 0.5
SHANK3-201ENST00000262795 FGFR1OPO95684 399 aaKnown RBP18.17■□□□□ 0.5
SHANK3-201ENST00000262795 ARHGAP29Q52LW3 1261 aa18.17■□□□□ 0.5
SHANK3-201ENST00000262795 PLIN2Q99541 437 aa18.17■□□□□ 0.5
SHANK3-201ENST00000262795 PRIM1P49642 420 aaKnown RBP18.16■□□□□ 0.5
SHANK3-201ENST00000262795 IRX3P78415 501 aaPredicted RBP18.16■□□□□ 0.5
SHANK3-201ENST00000262795 SYNJ1O43426 1573 aa18.16■□□□□ 0.5
SHANK3-201ENST00000262795 ZFP91Q96JP5 570 aaPredicted RBP18.16■□□□□ 0.5
SHANK3-201ENST00000262795 K7ELQ4 463 aaPredicted RBP18.16■□□□□ 0.5
SHANK3-201ENST00000262795 UQCRFS1P1P0C7P4 283 aa18.16■□□□□ 0.5
SHANK3-201ENST00000262795 ABL1P00519 1130 aa18.16■□□□□ 0.5
SHANK3-201ENST00000262795 C6orf50Q9HD87 102 aa18.15■□□□□ 0.5
SHANK3-201ENST00000262795 AFMP43652 599 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms