RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 CTAGE15A4D2H0 777 aa14.2□□□□□ -0.14
ARFGEF1-201ENST00000262215 RHOXF2BP0C7M4 288 aa14.2□□□□□ -0.14
ARFGEF1-201ENST00000262215 CTAGE8P0CG41 777 aa14.2□□□□□ -0.14
ARFGEF1-201ENST00000262215 MARCKSP29966 332 aaPredicted RBP14.2□□□□□ -0.14
ARFGEF1-201ENST00000262215 GEN1Q17RS7 908 aa14.2□□□□□ -0.14
ARFGEF1-201ENST00000262215 CTAGE6Q86UF2 777 aa14.2□□□□□ -0.14
ARFGEF1-201ENST00000262215 CTAGE4Q8IX94 777 aa14.2□□□□□ -0.14
ARFGEF1-201ENST00000262215 RHOXF2Q9BQY4 288 aa14.2□□□□□ -0.14
ARFGEF1-201ENST00000262215 CCDC102BQ68D86 513 aa14.19□□□□□ -0.14
ARFGEF1-201ENST00000262215 WDR63Q8IWG1 891 aa14.19□□□□□ -0.14
ARFGEF1-201ENST00000262215 SEC62Q99442 399 aaKnown RBP14.19□□□□□ -0.14
ARFGEF1-201ENST00000262215 SH2B1Q9NRF2 756 aaPredicted RBP14.19□□□□□ -0.14
ARFGEF1-201ENST00000262215 PPP2R5CQ13362 524 aa14.19□□□□□ -0.14
ARFGEF1-201ENST00000262215 LRSAM1Q6UWE0 723 aa14.19□□□□□ -0.14
ARFGEF1-201ENST00000262215 STXBP4Q6ZWJ1 553 aa14.19□□□□□ -0.14
ARFGEF1-201ENST00000262215 DDX19AQ9NUU7 478 aaKnown RBP14.19□□□□□ -0.14
ARFGEF1-201ENST00000262215 RFC1P35251 1148 aaPredicted RBP14.18□□□□□ -0.14
ARFGEF1-201ENST00000262215 SP4Q02446 784 aa14.18□□□□□ -0.14
ARFGEF1-201ENST00000262215 EPSTI1Q96J88 318 aa14.18□□□□□ -0.14
ARFGEF1-201ENST00000262215 CPLX4Q7Z7G2 160 aa14.18□□□□□ -0.14
ARFGEF1-201ENST00000262215 ARFGAP3Q9NP61 516 aa14.18□□□□□ -0.14
ARFGEF1-201ENST00000262215 ANO6Q4KMQ2 910 aa14.18□□□□□ -0.14
ARFGEF1-201ENST00000262215 CFAP157Q5JU67 520 aa14.18□□□□□ -0.14
ARFGEF1-201ENST00000262215 HEATR3Q7Z4Q2 680 aa14.18□□□□□ -0.14
ARFGEF1-201ENST00000262215 PLIN2Q99541 437 aa14.18□□□□□ -0.14
ARFGEF1-201ENST00000262215 STAT6P42226 847 aa14.18□□□□□ -0.14
ARFGEF1-201ENST00000262215 C10orf67Q8IYJ2 551 aa14.18□□□□□ -0.14
ARFGEF1-201ENST00000262215 TTC21AQ8NDW8 1320 aa14.18□□□□□ -0.14
ARFGEF1-201ENST00000262215 ANKS4BQ8N8V4 417 aa14.18□□□□□ -0.14
ARFGEF1-201ENST00000262215 PPP1R21Q6ZMI0 780 aa14.18□□□□□ -0.14
ARFGEF1-201ENST00000262215 DDX46Q7L014 1031 aaKnown RBP14.18□□□□□ -0.14
ARFGEF1-201ENST00000262215 CCDC65Q8IXS2 484 aa14.18□□□□□ -0.14
ARFGEF1-201ENST00000262215 KRT222Q8N1A0 295 aa14.18□□□□□ -0.14
ARFGEF1-201ENST00000262215 AFAP1Q8N556 730 aa14.18□□□□□ -0.14
ARFGEF1-201ENST00000262215 CCDC114Q96M63 670 aa14.18□□□□□ -0.14
ARFGEF1-201ENST00000262215 SELENOOQ9BVL4 669 aa14.18□□□□□ -0.14
ARFGEF1-201ENST00000262215 PDE1CQ14123 709 aaPredicted RBP14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 IFI16Q16666 785 aaKnown RBP14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 FEZ2Q9UHY8 353 aaPredicted RBP14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 CALM1P0DP23 149 aa14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 CALM2P0DP24 149 aa14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 CALM3P0DP25 149 aa14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 SKILP12757 684 aa14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 SYKP43405 635 aa14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 RNF41Q9H4P4 317 aaPredicted RBP14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 CABP5Q9NP86 173 aa14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 TXNDC16Q9P2K2 825 aa14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 SBNO2Q9Y2G9 1366 aa14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 MFSD6Q6ZSS7 791 aa14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 RASAL2Q9UJF2 1139 aa14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 SATB1Q01826 763 aa14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 ARID4AP29374 1257 aaPredicted RBP14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 LZTFL1Q9NQ48 299 aa14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 HMGB1P09429 215 aaKnown RBP14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 TMPOP42166 694 aaKnown RBP14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 STX17P56962 302 aa14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 PPP2R5DQ14738 602 aa14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 FAM114A2Q9NRY5 505 aa14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 GUCA1BQ9UMX6 200 aa14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 FAM169AQ9Y6X4 670 aa14.17□□□□□ -0.14
ARFGEF1-201ENST00000262215 PICALMQ13492 652 aa14.16□□□□□ -0.14
ARFGEF1-201ENST00000262215 CCDC186Q7Z3E2 898 aa14.16□□□□□ -0.14
ARFGEF1-201ENST00000262215 AOPEPQ8N6M6 819 aa14.16□□□□□ -0.14
ARFGEF1-201ENST00000262215 NEMFO60524 1076 aa14.16□□□□□ -0.14
ARFGEF1-201ENST00000262215 RPGRIP1LQ68CZ1 1315 aa14.16□□□□□ -0.14
ARFGEF1-201ENST00000262215 SNX16P57768 344 aa14.16□□□□□ -0.14
ARFGEF1-201ENST00000262215 RNASE9P60153 205 aaKnown RBP14.16□□□□□ -0.14
ARFGEF1-201ENST00000262215 MIPOL1Q8TD10 442 aa14.16□□□□□ -0.14
ARFGEF1-201ENST00000262215 CCDC77Q9BR77 488 aa14.16□□□□□ -0.14
ARFGEF1-201ENST00000262215 CNPY2Q9Y2B0 182 aa14.16□□□□□ -0.14
ARFGEF1-201ENST00000262215 ZSCAN23Q3MJ62 389 aa14.16□□□□□ -0.14
ARFGEF1-201ENST00000262215 IRX3P78415 501 aaPredicted RBP14.15□□□□□ -0.14
ARFGEF1-201ENST00000262215 LRRC45Q96CN5 670 aa14.15□□□□□ -0.14
ARFGEF1-201ENST00000262215 CLSTN2Q9H4D0 955 aa14.15□□□□□ -0.14
ARFGEF1-201ENST00000262215 SLU7O95391 586 aaKnown RBP14.15□□□□□ -0.14
ARFGEF1-201ENST00000262215 KIF5BP33176 963 aa14.15□□□□□ -0.14
ARFGEF1-201ENST00000262215 CCDC129Q6ZRS4 1044 aa14.15□□□□□ -0.14
ARFGEF1-201ENST00000262215 PPP1R12CQ9BZL4 782 aa14.15□□□□□ -0.14
ARFGEF1-201ENST00000262215 HAUS7Q99871 368 aa14.15□□□□□ -0.14
ARFGEF1-201ENST00000262215 PLVAPQ9BX97 442 aa14.15□□□□□ -0.14
ARFGEF1-201ENST00000262215 CYLC1P35663 651 aaPredicted RBP14.15□□□□□ -0.14
ARFGEF1-201ENST00000262215 GPIHBP1Q8IV16 184 aa14.15□□□□□ -0.14
ARFGEF1-201ENST00000262215 ANKRD30BQ9BXX2 1392 aa14.15□□□□□ -0.14
ARFGEF1-201ENST00000262215 HSPA1LP34931 641 aa14.15□□□□□ -0.14
ARFGEF1-201ENST00000262215 ASIC1P78348 528 aa14.15□□□□□ -0.14
ARFGEF1-201ENST00000262215 NFE2L2Q16236 605 aa14.15□□□□□ -0.14
ARFGEF1-201ENST00000262215 UBLCP1Q8WVY7 318 aaPredicted RBP14.15□□□□□ -0.14
ARFGEF1-201ENST00000262215 VGLL3A8MV65 326 aa14.14□□□□□ -0.15
ARFGEF1-201ENST00000262215 PPP1R7Q15435 360 aa14.14□□□□□ -0.15
ARFGEF1-201ENST00000262215 DHX58Q96C10 678 aa14.14□□□□□ -0.15
ARFGEF1-201ENST00000262215 CRCPO75575 148 aa14.14□□□□□ -0.15
ARFGEF1-201ENST00000262215 LDHAL6AQ6ZMR3 332 aa14.14□□□□□ -0.15
ARFGEF1-201ENST00000262215 SSH1Q8WYL5 1049 aa14.14□□□□□ -0.15
ARFGEF1-201ENST00000262215 CCDC171Q6TFL3 1326 aa14.14□□□□□ -0.15
ARFGEF1-201ENST00000262215 PDS5BQ9NTI5 1447 aa14.14□□□□□ -0.15
ARFGEF1-201ENST00000262215 GOLGA6L9A6NEM1 432 aa14.14□□□□□ -0.15
ARFGEF1-201ENST00000262215 TAF12Q16514 161 aa14.14□□□□□ -0.15
ARFGEF1-201ENST00000262215 NEK1Q96PY6 1258 aa14.14□□□□□ -0.15
ARFGEF1-201ENST00000262215 TRIM7Q9C029 511 aa14.14□□□□□ -0.15
ARFGEF1-201ENST00000262215 DNAJC25Q9H1X3 360 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms