RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 PLEKHO1Q53GL0 409 aaPredicted RBP20.12■□□□□ 0.81
CDK4-201ENST00000257904 LINS1Q8NG48 757 aa20.12■□□□□ 0.81
CDK4-201ENST00000257904 TNMDQ9H2S6 317 aa20.12■□□□□ 0.81
CDK4-201ENST00000257904 TLR7Q9NYK1 1049 aaKnown RBP20.12■□□□□ 0.81
CDK4-201ENST00000257904 NCAPD2Q15021 1401 aa20.12■□□□□ 0.81
CDK4-201ENST00000257904 JCADQ9P266 1359 aa20.11■□□□□ 0.81
CDK4-201ENST00000257904 RNMTO43148 476 aaKnown RBP20.11■□□□□ 0.81
CDK4-201ENST00000257904 CHAF1AQ13111 956 aaPredicted RBP20.11■□□□□ 0.81
CDK4-201ENST00000257904 TOB2Q14106 344 aaPredicted RBP20.11■□□□□ 0.81
CDK4-201ENST00000257904 LUZP1Q86V48 1076 aa20.11■□□□□ 0.81
CDK4-201ENST00000257904 ANKRD24Q8TF21 1146 aa20.11■□□□□ 0.81
CDK4-201ENST00000257904 TCEANC2Q96MN5 208 aa20.11■□□□□ 0.81
CDK4-201ENST00000257904 FSD1Q9BTV5 496 aa20.11■□□□□ 0.81
CDK4-201ENST00000257904 BICC1Q9H694 974 aaKnown RBP20.11■□□□□ 0.81
CDK4-201ENST00000257904 BCL2L12Q9HB09 334 aa20.11■□□□□ 0.81
CDK4-201ENST00000257904 DACT1Q9NYF0 836 aa20.11■□□□□ 0.81
CDK4-201ENST00000257904 RBM43Q6ZSC3 357 aaKnown RBP20.11■□□□□ 0.81
CDK4-201ENST00000257904 SPATA32Q96LK8 384 aa20.11■□□□□ 0.81
CDK4-201ENST00000257904 DDX19AQ9NUU7 478 aaKnown RBP20.11■□□□□ 0.81
CDK4-201ENST00000257904 AXIN2Q9Y2T1 843 aa20.11■□□□□ 0.81
CDK4-201ENST00000257904 TAF6LQ9Y6J9 622 aa20.11■□□□□ 0.81
CDK4-201ENST00000257904 OVOS2A0A0G2JMS6 1433 aa20.1■□□□□ 0.81
CDK4-201ENST00000257904 FAM177BA6PVY3 158 aa20.1■□□□□ 0.81
CDK4-201ENST00000257904 PTGS1P23219 599 aa20.1■□□□□ 0.81
CDK4-201ENST00000257904 AMOTQ4VCS5 1084 aa20.1■□□□□ 0.81
CDK4-201ENST00000257904 LARP1Q6PKG0 1096 aaKnown RBP20.1■□□□□ 0.81
CDK4-201ENST00000257904 PXDNQ92626 1479 aa20.1■□□□□ 0.81
CDK4-201ENST00000257904 GOLGA6L4A6NEF3 574 aa20.09■□□□□ 0.81
CDK4-201ENST00000257904 ANO6Q4KMQ2 910 aa20.09■□□□□ 0.81
CDK4-201ENST00000257904 CKAP2LQ8IYA6 745 aa20.09■□□□□ 0.81
CDK4-201ENST00000257904 LEO1Q8WVC0 666 aaPredicted RBP20.09■□□□□ 0.81
CDK4-201ENST00000257904 BOLA2Q9H3K6 86 aa20.09■□□□□ 0.81
CDK4-201ENST00000257904 CBX8Q9HC52 389 aa20.09■□□□□ 0.81
CDK4-201ENST00000257904 HMG20BQ9P0W2 317 aa20.09■□□□□ 0.81
CDK4-201ENST00000257904 RIOK3O14730 519 aaKnown RBP20.09■□□□□ 0.81
CDK4-201ENST00000257904 ZC3H6P61129 1189 aaKnown RBP20.09■□□□□ 0.81
CDK4-201ENST00000257904 TSGA10IPQ3SY00 556 aa20.09■□□□□ 0.81
CDK4-201ENST00000257904 BRINP3Q76B58 766 aa20.09■□□□□ 0.81
CDK4-201ENST00000257904 PRAMEF22A3QJZ6 481 aa20.08■□□□□ 0.81
CDK4-201ENST00000257904 C1orf141Q5JVX7 400 aa20.08■□□□□ 0.81
CDK4-201ENST00000257904 CLSTN2Q9H4D0 955 aa20.08■□□□□ 0.81
CDK4-201ENST00000257904 ZNF589Q86UQ0 364 aaPredicted RBP20.07■□□□□ 0.8
CDK4-201ENST00000257904 TFIP11Q9UBB9 837 aaKnown RBP20.07■□□□□ 0.8
CDK4-201ENST00000257904 DDX58O95786 925 aaKnown RBP20.07■□□□□ 0.8
CDK4-201ENST00000257904 SLAIN2Q9P270 581 aa20.07■□□□□ 0.8
CDK4-201ENST00000257904 MRC1P22897 1456 aa20.07■□□□□ 0.8
CDK4-201ENST00000257904 STK3Q13188 491 aa20.06■□□□□ 0.8
CDK4-201ENST00000257904 SIL1Q9H173 461 aa20.06■□□□□ 0.8
CDK4-201ENST00000257904 TNS3Q68CZ2 1445 aa20.06■□□□□ 0.8
CDK4-201ENST00000257904 RGPD5Q99666 1765 aa20.06■□□□□ 0.8
CDK4-201ENST00000257904 CCDC186Q7Z3E2 898 aa20.06■□□□□ 0.8
CDK4-201ENST00000257904 PLA2G4DQ86XP0 818 aa20.06■□□□□ 0.8
CDK4-201ENST00000257904 TDRD7Q8NHU6 1098 aaKnown RBP20.06■□□□□ 0.8
CDK4-201ENST00000257904 SPATA31A3Q5VYP0 1347 aa20.05■□□□□ 0.8
CDK4-201ENST00000257904 CTIFO43310 598 aaKnown RBP20.05■□□□□ 0.8
CDK4-201ENST00000257904 TAF5LO75529 589 aa20.05■□□□□ 0.8
CDK4-201ENST00000257904 USPL1Q5W0Q7 1092 aa20.05■□□□□ 0.8
CDK4-201ENST00000257904 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.05■□□□□ 0.8
CDK4-201ENST00000257904 DDX21Q9NR30 783 aaKnown RBP eCLIP20.05■□□□□ 0.8
CDK4-201ENST00000257904 NR1I2O75469 434 aa20.04■□□□□ 0.8
CDK4-201ENST00000257904 ZNF75DP51815 510 aa20.04■□□□□ 0.8
CDK4-201ENST00000257904 PPP4R3BQ5MIZ7 849 aa20.04■□□□□ 0.8
CDK4-201ENST00000257904 ANKRD7Q92527 254 aa20.04■□□□□ 0.8
CDK4-201ENST00000257904 GTF3C6Q969F1 213 aa20.04■□□□□ 0.8
CDK4-201ENST00000257904 PGBD1Q96JS3 809 aa20.04■□□□□ 0.8
CDK4-201ENST00000257904 PRDM10Q9NQV6 1147 aa20.04■□□□□ 0.8
CDK4-201ENST00000257904 IGKV5-2P06315 115 aa20.04■□□□□ 0.8
CDK4-201ENST00000257904 KRT32Q14532 448 aa20.04■□□□□ 0.8
CDK4-201ENST00000257904 AIMP1Q12904 312 aaKnown RBP20.03■□□□□ 0.8
CDK4-201ENST00000257904 DRC7Q8IY82 874 aa20.03■□□□□ 0.8
CDK4-201ENST00000257904 PDCL2Q8N4E4 241 aa20.03■□□□□ 0.8
CDK4-201ENST00000257904 BICD2Q8TD16 824 aa20.03■□□□□ 0.8
CDK4-201ENST00000257904 TRIM5Q9C035 493 aa20.03■□□□□ 0.8
CDK4-201ENST00000257904 JAK2O60674 1132 aa20.03■□□□□ 0.8
CDK4-201ENST00000257904 LRMPQ12912 555 aa20.03■□□□□ 0.8
CDK4-201ENST00000257904 RESTQ13127 1097 aa20.03■□□□□ 0.8
CDK4-201ENST00000257904 PDIA6Q15084 440 aa20.03■□□□□ 0.8
CDK4-201ENST00000257904 KLHDC4Q8TBB5 520 aa20.03■□□□□ 0.8
CDK4-201ENST00000257904 ZNF165P49910 485 aa20.02■□□□□ 0.8
CDK4-201ENST00000257904 CABLES1Q8TDN4 633 aa20.02■□□□□ 0.8
CDK4-201ENST00000257904 NRBP1Q9UHY1 535 aa20.02■□□□□ 0.8
CDK4-201ENST00000257904 SIPA1L3O60292 1781 aaPredicted RBP20.02■□□□□ 0.79
CDK4-201ENST00000257904 COL15A1P39059 1388 aa20.02■□□□□ 0.79
CDK4-201ENST00000257904 ERBB3P21860 1342 aa20.01■□□□□ 0.79
CDK4-201ENST00000257904 ZSCAN25Q6NSZ9 544 aa20.01■□□□□ 0.79
CDK4-201ENST00000257904 BRF1Q92994 677 aa20.01■□□□□ 0.79
CDK4-201ENST00000257904 EDC3Q96F86 508 aaKnown RBP20.01■□□□□ 0.79
CDK4-201ENST00000257904 ZSCAN20P17040 1043 aaPredicted RBP20.01■□□□□ 0.79
CDK4-201ENST00000257904 ATP2B3Q16720 1220 aa20.01■□□□□ 0.79
CDK4-201ENST00000257904 NEK1Q96PY6 1258 aa20.01■□□□□ 0.79
CDK4-201ENST00000257904 DNAJC25Q9H1X3 360 aa20.01■□□□□ 0.79
CDK4-201ENST00000257904 CAVIN2O95810 425 aa20■□□□□ 0.79
CDK4-201ENST00000257904 CBX1P83916 185 aa20■□□□□ 0.79
CDK4-201ENST00000257904 DMTNQ08495 405 aa20■□□□□ 0.79
CDK4-201ENST00000257904 RIC3Q7Z5B4 369 aa20■□□□□ 0.79
CDK4-201ENST00000257904 CAMTA1Q9Y6Y1 1673 aa20■□□□□ 0.79
CDK4-201ENST00000257904 NEURL1BA8MQ27 555 aa19.99■□□□□ 0.79
CDK4-201ENST00000257904 ATP5JP18859 108 aa19.99■□□□□ 0.79
CDK4-201ENST00000257904 UTP14CQ5TAP6 766 aaKnown RBP19.99■□□□□ 0.79
CDK4-201ENST00000257904 EPHA10Q5JZY3 1008 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms