RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 RFC4P35249 363 aa11.66□□□□□ -0.54
NIP7-202ENST00000254941 PDE1AP54750 535 aa11.66□□□□□ -0.54
NIP7-202ENST00000254941 USPL1Q5W0Q7 1092 aa11.66□□□□□ -0.54
NIP7-202ENST00000254941 BCL11AQ9H165 835 aa11.66□□□□□ -0.54
NIP7-202ENST00000254941 SIL1Q9H173 461 aa11.66□□□□□ -0.54
NIP7-202ENST00000254941 CHMP3Q9Y3E7 222 aa11.66□□□□□ -0.54
NIP7-202ENST00000254941 PDE8AO60658 829 aa11.65□□□□□ -0.54
NIP7-202ENST00000254941 MX1P20591 662 aa11.65□□□□□ -0.54
NIP7-202ENST00000254941 SSFA2P28290 1259 aa11.65□□□□□ -0.54
NIP7-202ENST00000254941 CTSWP56202 376 aa11.65□□□□□ -0.54
NIP7-202ENST00000254941 TTC22Q5TAA0 569 aa11.65□□□□□ -0.54
NIP7-202ENST00000254941 CLASRPQ8N2M8 674 aaKnown RBP11.65□□□□□ -0.54
NIP7-202ENST00000254941 TTLL11Q8NHH1 800 aa11.65□□□□□ -0.54
NIP7-202ENST00000254941 STAP2Q9UGK3 403 aa11.65□□□□□ -0.54
NIP7-202ENST00000254941 SRP68Q9UHB9 627 aaKnown RBP11.65□□□□□ -0.54
NIP7-202ENST00000254941 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.64□□□□□ -0.55
NIP7-202ENST00000254941 PHF14O94880 888 aa11.64□□□□□ -0.55
NIP7-202ENST00000254941 HSP90B1P14625 803 aaKnown RBP11.64□□□□□ -0.55
NIP7-202ENST00000254941 CCDC57Q2TAC2 916 aa11.64□□□□□ -0.55
NIP7-202ENST00000254941 TBC1D9BQ66K14 1250 aa11.64□□□□□ -0.55
NIP7-202ENST00000254941 GSPT1P15170 499 aaKnown RBP11.63□□□□□ -0.55
NIP7-202ENST00000254941 SETDB2Q96T68 719 aa11.63□□□□□ -0.55
NIP7-202ENST00000254941 FBXO3Q9UK99 471 aa11.63□□□□□ -0.55
NIP7-202ENST00000254941 AOX1Q06278 1338 aa11.63□□□□□ -0.55
NIP7-202ENST00000254941 FAM177BA6PVY3 158 aa11.63□□□□□ -0.55
NIP7-202ENST00000254941 CIAO1O76071 339 aa11.63□□□□□ -0.55
NIP7-202ENST00000254941 IFIT5Q13325 482 aaKnown RBP11.63□□□□□ -0.55
NIP7-202ENST00000254941 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.63□□□□□ -0.55
NIP7-202ENST00000254941 HCLS1P14317 486 aaPredicted RBP11.62□□□□□ -0.55
NIP7-202ENST00000254941 ATG9AQ7Z3C6 839 aa11.62□□□□□ -0.55
NIP7-202ENST00000254941 NUTM1Q86Y26 1132 aa11.62□□□□□ -0.55
NIP7-202ENST00000254941 NYXQ9GZU5 481 aa11.62□□□□□ -0.55
NIP7-202ENST00000254941 GREM2Q9H772 168 aa11.62□□□□□ -0.55
NIP7-202ENST00000254941 EYA2O00167 538 aa11.61□□□□□ -0.55
NIP7-202ENST00000254941 ITGA6P23229 1130 aa11.61□□□□□ -0.55
NIP7-202ENST00000254941 IL15P40933 162 aaPredicted RBP11.61□□□□□ -0.55
NIP7-202ENST00000254941 BICDL1Q6ZP65 573 aa11.61□□□□□ -0.55
NIP7-202ENST00000254941 AKT1S1Q96B36 256 aa11.61□□□□□ -0.55
NIP7-202ENST00000254941 EAF2Q96CJ1 260 aaPredicted RBP11.61□□□□□ -0.55
NIP7-202ENST00000254941 ZNF594Q96JF6 807 aaPredicted RBP11.61□□□□□ -0.55
NIP7-202ENST00000254941 SPEF2Q9C093 1822 aa11.61□□□□□ -0.55
NIP7-202ENST00000254941 RTL9Q8NET4 1388 aa11.61□□□□□ -0.55
NIP7-202ENST00000254941 TTC41PQ6P2S7 1318 aa11.61□□□□□ -0.55
NIP7-202ENST00000254941 AACSQ86V21 672 aa11.61□□□□□ -0.55
NIP7-202ENST00000254941 CCDC85AQ96PX6 553 aaPredicted RBP11.61□□□□□ -0.55
NIP7-202ENST00000254941 ANKRD18BA2A2Z9 1011 aa11.6□□□□□ -0.55
NIP7-202ENST00000254941 IFIT2P09913 472 aaKnown RBP11.6□□□□□ -0.55
NIP7-202ENST00000254941 GYS1P13807 737 aa11.6□□□□□ -0.55
NIP7-202ENST00000254941 TFCP2Q12800 502 aa11.6□□□□□ -0.55
NIP7-202ENST00000254941 ZNF827Q17R98 1081 aa11.6□□□□□ -0.55
NIP7-202ENST00000254941 ERFEQ4G0M1 354 aa11.6□□□□□ -0.55
NIP7-202ENST00000254941 LRRC24Q50LG9 513 aa11.6□□□□□ -0.55
NIP7-202ENST00000254941 SLC10A5Q5PT55 438 aa11.6□□□□□ -0.55
NIP7-202ENST00000254941 TSHZ3Q63HK5 1081 aa11.6□□□□□ -0.55
NIP7-202ENST00000254941 PI4K2BQ8TCG2 481 aa11.6□□□□□ -0.55
NIP7-202ENST00000254941 SP7Q8TDD2 431 aaPredicted RBP11.6□□□□□ -0.55
NIP7-202ENST00000254941 LRP5O75197 1615 aa11.6□□□□□ -0.55
NIP7-202ENST00000254941 TAF1P21675 1872 aa11.6□□□□□ -0.55
NIP7-202ENST00000254941 CARMIL3Q8ND23 1372 aa11.6□□□□□ -0.55
NIP7-202ENST00000254941 SDSP20132 328 aa11.59□□□□□ -0.55
NIP7-202ENST00000254941 CCDC152Q4G0S7 254 aa11.59□□□□□ -0.55
NIP7-202ENST00000254941 TNNI3KQ59H18 835 aa11.59□□□□□ -0.55
NIP7-202ENST00000254941 TAF7LQ5H9L4 462 aa11.59□□□□□ -0.55
NIP7-202ENST00000254941 TPTE2Q6XPS3 522 aa11.59□□□□□ -0.55
NIP7-202ENST00000254941 NBPF5PQ86XG9 351 aaPredicted RBP11.59□□□□□ -0.55
NIP7-202ENST00000254941 PUS3Q9BZE2 481 aaKnown RBP11.59□□□□□ -0.55
NIP7-202ENST00000254941 GPR108Q9NPR9 543 aa11.59□□□□□ -0.55
NIP7-202ENST00000254941 TFCP2L1Q9NZI6 479 aa11.59□□□□□ -0.55
NIP7-202ENST00000254941 FPGT-TNNI3KV9GXZ4 949 aa11.59□□□□□ -0.55
NIP7-202ENST00000254941 QSER1Q2KHR3 1735 aa11.59□□□□□ -0.55
NIP7-202ENST00000254941 SEC24BO95487 1268 aa11.59□□□□□ -0.55
NIP7-202ENST00000254941 NFIXQ14938 502 aa11.59□□□□□ -0.55
NIP7-202ENST00000254941 GPATCH3Q96I76 525 aa11.59□□□□□ -0.55
NIP7-202ENST00000254941 CAMKK2Q96RR4 588 aa11.59□□□□□ -0.55
NIP7-202ENST00000254941 ECHDC1Q9NTX5 307 aa11.59□□□□□ -0.55
NIP7-202ENST00000254941 RIPOR2Q9Y4F9 1068 aa11.59□□□□□ -0.55
NIP7-202ENST00000254941 ABCC12Q96J65 1359 aa11.58□□□□□ -0.56
NIP7-202ENST00000254941 ERC2O15083 957 aa11.58□□□□□ -0.56
NIP7-202ENST00000254941 CDC45O75419 566 aa11.58□□□□□ -0.56
NIP7-202ENST00000254941 GLRX3O76003 335 aaKnown RBP11.58□□□□□ -0.56
NIP7-202ENST00000254941 GTF2E1P29083 439 aaPredicted RBP11.58□□□□□ -0.56
NIP7-202ENST00000254941 SF3B3Q15393 1217 aaKnown RBP11.58□□□□□ -0.56
NIP7-202ENST00000254941 LDHAL6AQ6ZMR3 332 aa11.58□□□□□ -0.56
NIP7-202ENST00000254941 TBC1D9Q6ZT07 1266 aa11.58□□□□□ -0.56
NIP7-202ENST00000254941 FLAD1Q8NFF5 587 aa11.58□□□□□ -0.56
NIP7-202ENST00000254941 CCDC8Q9H0W5 538 aaPredicted RBP11.57□□□□□ -0.56
NIP7-202ENST00000254941 TLR7Q9NYK1 1049 aaKnown RBP11.57□□□□□ -0.56
NIP7-202ENST00000254941 CEP126Q9P2H0 1117 aa11.57□□□□□ -0.56
NIP7-202ENST00000254941 DBNLQ9UJU6 430 aaKnown RBP11.57□□□□□ -0.56
NIP7-202ENST00000254941 TM4SF1P30408 202 aa11.57□□□□□ -0.56
NIP7-202ENST00000254941 EN1Q05925 392 aaPredicted RBP11.57□□□□□ -0.56
NIP7-202ENST00000254941 EZH2Q15910 746 aaKnown RBP11.57□□□□□ -0.56
NIP7-202ENST00000254941 ZNF609O15014 1411 aa11.57□□□□□ -0.56
NIP7-202ENST00000254941 RIC1Q4ADV7 1423 aa11.57□□□□□ -0.56
NIP7-202ENST00000254941 A0A1B0GUL6 1792 aa11.56□□□□□ -0.56
NIP7-202ENST00000254941 C3orf67Q6ZVT6 689 aa11.56□□□□□ -0.56
NIP7-202ENST00000254941 COL23A1Q86Y22 540 aaPredicted RBP11.56□□□□□ -0.56
NIP7-202ENST00000254941 SEC31BQ9NQW1 1179 aa11.56□□□□□ -0.56
NIP7-202ENST00000254941 CNNM1Q9NRU3 951 aa11.56□□□□□ -0.56
NIP7-202ENST00000254941 AKAP2Q9Y2D5 859 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 170.5 ms