RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 PA2G4Q9UQ80 394 aaKnown RBP13.66□□□□□ -0.22
TNFAIP3-201ENST00000237289 CDHR2Q9BYE9 1310 aa13.66□□□□□ -0.22
TNFAIP3-201ENST00000237289 BCS1LQ9Y276 419 aa13.66□□□□□ -0.22
TNFAIP3-201ENST00000237289 TRIM6-TRIM34B2RNG4 842 aa13.65□□□□□ -0.22
TNFAIP3-201ENST00000237289 NPR1P16066 1061 aa13.65□□□□□ -0.22
TNFAIP3-201ENST00000237289 AACSQ86V21 672 aa13.65□□□□□ -0.22
TNFAIP3-201ENST00000237289 ANKRD2Q9GZV1 360 aa13.65□□□□□ -0.22
TNFAIP3-201ENST00000237289 PCDHB15Q9Y5E8 787 aa13.65□□□□□ -0.22
TNFAIP3-201ENST00000237289 NTSR2O95665 410 aa13.65□□□□□ -0.22
TNFAIP3-201ENST00000237289 CAVIN4Q5BKX8 364 aa13.65□□□□□ -0.22
TNFAIP3-201ENST00000237289 GREM2Q9H772 168 aa13.65□□□□□ -0.22
TNFAIP3-201ENST00000237289 ATP10DQ9P241 1426 aa13.65□□□□□ -0.22
TNFAIP3-201ENST00000237289 UBN2Q6ZU65 1347 aa13.65□□□□□ -0.22
TNFAIP3-201ENST00000237289 SLC5A1P13866 664 aa13.65□□□□□ -0.22
TNFAIP3-201ENST00000237289 MASTLQ96GX5 879 aa13.65□□□□□ -0.22
TNFAIP3-201ENST00000237289 ZNF594Q96JF6 807 aaPredicted RBP13.65□□□□□ -0.22
TNFAIP3-201ENST00000237289 ERC2O15083 957 aa13.64□□□□□ -0.23
TNFAIP3-201ENST00000237289 NHSQ6T4R5 1651 aa13.64□□□□□ -0.23
TNFAIP3-201ENST00000237289 SOCS7O14512 581 aa13.64□□□□□ -0.23
TNFAIP3-201ENST00000237289 BTAF1O14981 1849 aa13.64□□□□□ -0.23
TNFAIP3-201ENST00000237289 TTC39AQ5SRH9 613 aa13.64□□□□□ -0.23
TNFAIP3-201ENST00000237289 TTLL11Q8NHH1 800 aa13.64□□□□□ -0.23
TNFAIP3-201ENST00000237289 EYA2O00167 538 aa13.63□□□□□ -0.23
TNFAIP3-201ENST00000237289 BCL2L12Q9HB09 334 aa13.63□□□□□ -0.23
TNFAIP3-201ENST00000237289 BBOX1O75936 387 aa13.63□□□□□ -0.23
TNFAIP3-201ENST00000237289 LRP10Q7Z4F1 713 aa13.63□□□□□ -0.23
TNFAIP3-201ENST00000237289 KLHDC4Q8TBB5 520 aa13.63□□□□□ -0.23
TNFAIP3-201ENST00000237289 ITGB4P16144 1822 aa13.63□□□□□ -0.23
TNFAIP3-201ENST00000237289 HELBQ8NG08 1087 aaPredicted RBP13.63□□□□□ -0.23
TNFAIP3-201ENST00000237289 POLRMTO00411 1230 aaKnown RBP13.63□□□□□ -0.23
TNFAIP3-201ENST00000237289 TTLL6Q8N841 843 aa13.63□□□□□ -0.23
TNFAIP3-201ENST00000237289 PIM2Q9P1W9 311 aa13.63□□□□□ -0.23
TNFAIP3-201ENST00000237289 PNMA6EA0A0J9YXQ4 647 aa13.62□□□□□ -0.23
TNFAIP3-201ENST00000237289 GPR162Q16538 588 aa13.62□□□□□ -0.23
TNFAIP3-201ENST00000237289 SEC31BQ9NQW1 1179 aa13.62□□□□□ -0.23
TNFAIP3-201ENST00000237289 BRWD3Q6RI45 1802 aa13.62□□□□□ -0.23
TNFAIP3-201ENST00000237289 ZC3H12CQ9C0D7 883 aaKnown RBP13.62□□□□□ -0.23
TNFAIP3-201ENST00000237289 HDAC1Q13547 482 aaPredicted RBP13.62□□□□□ -0.23
TNFAIP3-201ENST00000237289 EYA3Q99504 573 aa13.62□□□□□ -0.23
TNFAIP3-201ENST00000237289 DDR1Q08345 913 aa13.61□□□□□ -0.23
TNFAIP3-201ENST00000237289 DPP8Q6V1X1 898 aaPredicted RBP13.61□□□□□ -0.23
TNFAIP3-201ENST00000237289 TMC4Q7Z404 712 aa13.61□□□□□ -0.23
TNFAIP3-201ENST00000237289 WNK3Q9BYP7 1800 aa13.61□□□□□ -0.23
TNFAIP3-201ENST00000237289 TM4SF1P30408 202 aa13.61□□□□□ -0.23
TNFAIP3-201ENST00000237289 ATP2B3Q16720 1220 aa13.61□□□□□ -0.23
TNFAIP3-201ENST00000237289 DALRD3Q5D0E6 543 aaKnown RBP13.61□□□□□ -0.23
TNFAIP3-201ENST00000237289 RHPN1Q8TCX5 695 aa13.61□□□□□ -0.23
TNFAIP3-201ENST00000237289 GRAPQ13588 217 aa13.61□□□□□ -0.23
TNFAIP3-201ENST00000237289 LRRFIP1Q32MZ4 808 aaKnown RBP13.61□□□□□ -0.23
TNFAIP3-201ENST00000237289 AMIGO3Q86WK7 504 aa13.61□□□□□ -0.23
TNFAIP3-201ENST00000237289 GRAPLQ8TC17 118 aaPredicted RBP13.61□□□□□ -0.23
TNFAIP3-201ENST00000237289 PXDNLA1KZ92 1463 aa13.61□□□□□ -0.23
TNFAIP3-201ENST00000237289 PPEF1O14829 653 aaPredicted RBP13.61□□□□□ -0.23
TNFAIP3-201ENST00000237289 EPHA10Q5JZY3 1008 aa13.6□□□□□ -0.23
TNFAIP3-201ENST00000237289 SOGA3Q5TF21 947 aa13.6□□□□□ -0.23
TNFAIP3-201ENST00000237289 CHD1LQ86WJ1 897 aa13.6□□□□□ -0.23
TNFAIP3-201ENST00000237289 MPNDQ8N594 471 aa13.6□□□□□ -0.23
TNFAIP3-201ENST00000237289 RILPL2Q969X0 211 aa13.6□□□□□ -0.23
TNFAIP3-201ENST00000237289 CCDC8Q9H0W5 538 aaPredicted RBP13.6□□□□□ -0.23
TNFAIP3-201ENST00000237289 GGA1Q9UJY5 639 aa13.6□□□□□ -0.23
TNFAIP3-201ENST00000237289 TOGARAM1Q9Y4F4 1720 aa13.6□□□□□ -0.23
TNFAIP3-201ENST00000237289 KDM3BQ7LBC6 1761 aa13.6□□□□□ -0.23
TNFAIP3-201ENST00000237289 PLA2G12BQ9BX93 195 aa13.6□□□□□ -0.23
TNFAIP3-201ENST00000237289 UPF2Q9HAU5 1272 aaKnown RBP13.6□□□□□ -0.23
TNFAIP3-201ENST00000237289 SMARCA5O60264 1052 aaPredicted RBP13.6□□□□□ -0.23
TNFAIP3-201ENST00000237289 CHRNA5P30532 468 aa13.6□□□□□ -0.23
TNFAIP3-201ENST00000237289 SSH3Q8TE77 659 aa13.6□□□□□ -0.23
TNFAIP3-201ENST00000237289 A0A0G2JLW4 131 aa13.59□□□□□ -0.23
TNFAIP3-201ENST00000237289 UFL1O94874 794 aa13.59□□□□□ -0.23
TNFAIP3-201ENST00000237289 MROH5Q6ZUA9 1318 aa13.59□□□□□ -0.23
TNFAIP3-201ENST00000237289 SF3B3Q15393 1217 aaKnown RBP13.59□□□□□ -0.23
TNFAIP3-201ENST00000237289 SLC10A5Q5PT55 438 aa13.59□□□□□ -0.23
TNFAIP3-201ENST00000237289 SUPT20HQ8NEM7 779 aa13.59□□□□□ -0.23
TNFAIP3-201ENST00000237289 PDGFDQ9GZP0 370 aaPredicted RBP13.59□□□□□ -0.23
TNFAIP3-201ENST00000237289 DCTPP1Q9H773 170 aa13.59□□□□□ -0.23
TNFAIP3-201ENST00000237289 TFCP2Q12800 502 aa13.59□□□□□ -0.23
TNFAIP3-201ENST00000237289 JDP2Q8WYK2 163 aa13.59□□□□□ -0.23
TNFAIP3-201ENST00000237289 DNAJC2Q99543 621 aaKnown RBP13.59□□□□□ -0.23
TNFAIP3-201ENST00000237289 FBXO3Q9UK99 471 aa13.59□□□□□ -0.23
TNFAIP3-201ENST00000237289 TAF5LO75529 589 aa13.58□□□□□ -0.24
TNFAIP3-201ENST00000237289 CC2D2BQ6DHV5 1058 aa13.58□□□□□ -0.24
TNFAIP3-201ENST00000237289 NOL10Q9BSC4 688 aaKnown RBP13.58□□□□□ -0.24
TNFAIP3-201ENST00000237289 COPRSQ9NQ92 184 aa13.58□□□□□ -0.24
TNFAIP3-201ENST00000237289 RIMBP2O15034 1052 aa13.58□□□□□ -0.24
TNFAIP3-201ENST00000237289 EIF5BO60841 1220 aaKnown RBP13.58□□□□□ -0.24
TNFAIP3-201ENST00000237289 IGHDP01880 384 aa13.58□□□□□ -0.24
TNFAIP3-201ENST00000237289 CHAF1AQ13111 956 aaPredicted RBP13.58□□□□□ -0.24
TNFAIP3-201ENST00000237289 FOXO4P98177 505 aa13.57□□□□□ -0.24
TNFAIP3-201ENST00000237289 FKBP4Q02790 459 aaKnown RBP eCLIP13.57□□□□□ -0.24
TNFAIP3-201ENST00000237289 TGFB2P61812 414 aa13.57□□□□□ -0.24
TNFAIP3-201ENST00000237289 ARHGAP27Q6ZUM4 889 aa13.57□□□□□ -0.24
TNFAIP3-201ENST00000237289 SHANK3Q9BYB0 1731 aa13.57□□□□□ -0.24
TNFAIP3-201ENST00000237289 WASHC4Q2M389 1173 aa13.57□□□□□ -0.24
TNFAIP3-201ENST00000237289 ZNF804AQ7Z570 1209 aa13.57□□□□□ -0.24
TNFAIP3-201ENST00000237289 CRAMP1Q96RY5 1269 aa13.57□□□□□ -0.24
TNFAIP3-201ENST00000237289 DPEP1P16444 411 aa13.57□□□□□ -0.24
TNFAIP3-201ENST00000237289 PUM3Q15397 648 aaKnown RBP13.57□□□□□ -0.24
TNFAIP3-201ENST00000237289 CELF1Q92879 486 aaKnown RBP13.57□□□□□ -0.24
TNFAIP3-201ENST00000237289 BSDC1Q9NW68 430 aaPredicted RBP13.57□□□□□ -0.24
TNFAIP3-201ENST00000237289 UTYO14607 1347 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms