RNA–Protein interactions for RNA: ENST00000235372.11

PRDM2-201, Transcript of PR/SET domain 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRDM2, Length 7,957 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-201ENST00000235372 NACA2Q9H009 215 aa8.56□□□□□ -1.04
PRDM2-201ENST00000235372 NEMFO60524 1076 aa8.56□□□□□ -1.04
PRDM2-201ENST00000235372 RAB11FIP3O75154 756 aa8.56□□□□□ -1.04
PRDM2-201ENST00000235372 PPFIA2O75334 1257 aa8.56□□□□□ -1.04
PRDM2-201ENST00000235372 CCDC183Q5T5S1 534 aa8.56□□□□□ -1.04
PRDM2-201ENST00000235372 CCDC129Q6ZRS4 1044 aa8.56□□□□□ -1.04
PRDM2-201ENST00000235372 NOD1Q9Y239 953 aa8.56□□□□□ -1.04
PRDM2-201ENST00000235372 E7EVH7 732 aa8.56□□□□□ -1.04
PRDM2-201ENST00000235372 OGFOD1Q8N543 542 aa8.56□□□□□ -1.04
PRDM2-201ENST00000235372 AFG3L2Q9Y4W6 797 aa8.56□□□□□ -1.04
PRDM2-201ENST00000235372 BCAR3O75815 825 aa8.55□□□□□ -1.04
PRDM2-201ENST00000235372 SRGAP1Q7Z6B7 1085 aa8.55□□□□□ -1.04
PRDM2-201ENST00000235372 STMN2Q93045 179 aa8.55□□□□□ -1.04
PRDM2-201ENST00000235372 DACT3Q96B18 629 aaPredicted RBP8.55□□□□□ -1.04
PRDM2-201ENST00000235372 PDZRN3Q9UPQ7 1066 aa8.55□□□□□ -1.04
PRDM2-201ENST00000235372 GOLGA4Q13439 2230 aaKnown RBP8.55□□□□□ -1.04
PRDM2-201ENST00000235372 ERCC3P19447 782 aa8.55□□□□□ -1.04
PRDM2-201ENST00000235372 SEC62Q99442 399 aaKnown RBP8.55□□□□□ -1.04
PRDM2-201ENST00000235372 STK10O94804 968 aaKnown RBP8.55□□□□□ -1.04
PRDM2-201ENST00000235372 TRIM47Q96LD4 638 aa8.55□□□□□ -1.04
PRDM2-201ENST00000235372 VCX3BQ9H321 246 aa8.55□□□□□ -1.04
PRDM2-201ENST00000235372 JPH4Q96JJ6 628 aa8.55□□□□□ -1.04
PRDM2-201ENST00000235372 CDC5LQ99459 802 aaKnown RBP8.55□□□□□ -1.04
PRDM2-201ENST00000235372 SELENOSQ9BQE4 189 aa8.55□□□□□ -1.04
PRDM2-201ENST00000235372 PRKRIP1Q9H875 184 aaPredicted RBP8.55□□□□□ -1.04
PRDM2-201ENST00000235372 ZHX1Q9UKY1 873 aaPredicted RBP8.55□□□□□ -1.04
PRDM2-201ENST00000235372 RFC1P35251 1148 aaPredicted RBP8.55□□□□□ -1.04
PRDM2-201ENST00000235372 NAA25Q14CX7 972 aa8.55□□□□□ -1.04
PRDM2-201ENST00000235372 PRR16Q569H4 304 aa8.55□□□□□ -1.04
PRDM2-201ENST00000235372 CEP128Q6ZU80 1094 aa8.55□□□□□ -1.04
PRDM2-201ENST00000235372 CIZ1Q9ULV3 898 aaPredicted RBP8.55□□□□□ -1.04
PRDM2-201ENST00000235372 SETDB1Q15047 1291 aa8.55□□□□□ -1.04
PRDM2-201ENST00000235372 WHAMMQ8TF30 809 aa8.55□□□□□ -1.04
PRDM2-201ENST00000235372 NSMCE1Q8WV22 266 aa8.54□□□□□ -1.04
PRDM2-201ENST00000235372 C6orf50Q9HD87 102 aa8.54□□□□□ -1.04
PRDM2-201ENST00000235372 USP25Q9UHP3 1055 aa8.54□□□□□ -1.04
PRDM2-201ENST00000235372 LMOD1P29536 600 aaPredicted RBP8.54□□□□□ -1.04
PRDM2-201ENST00000235372 CYLC1P35663 651 aaPredicted RBP8.54□□□□□ -1.04
PRDM2-201ENST00000235372 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.54□□□□□ -1.04
PRDM2-201ENST00000235372 AGTPBP1Q9UPW5 1226 aa8.54□□□□□ -1.04
PRDM2-201ENST00000235372 PLEKHH1Q9ULM0 1364 aa8.54□□□□□ -1.04
PRDM2-201ENST00000235372 RFC4P35249 363 aa8.54□□□□□ -1.04
PRDM2-201ENST00000235372 INF2Q27J81 1249 aa8.54□□□□□ -1.04
PRDM2-201ENST00000235372 MUM1L1Q5H9M0 696 aa8.54□□□□□ -1.04
PRDM2-201ENST00000235372 ECM2O94769 699 aaPredicted RBP8.54□□□□□ -1.04
PRDM2-201ENST00000235372 EXOSC9Q06265 439 aaKnown RBP8.54□□□□□ -1.04
PRDM2-201ENST00000235372 STX1AQ16623 288 aa8.54□□□□□ -1.04
PRDM2-201ENST00000235372 KIF1BPQ96EK5 621 aa8.54□□□□□ -1.04
PRDM2-201ENST00000235372 SH2B1Q9NRF2 756 aaPredicted RBP8.54□□□□□ -1.04
PRDM2-201ENST00000235372 TRMT112Q9UI30 125 aaKnown RBP8.54□□□□□ -1.04
PRDM2-201ENST00000235372 DAPK3O43293 454 aa8.54□□□□□ -1.04
PRDM2-201ENST00000235372 AKR1B10O60218 316 aa8.54□□□□□ -1.04
PRDM2-201ENST00000235372 CTAGE1Q96RT6 745 aa8.54□□□□□ -1.04
PRDM2-201ENST00000235372 TSPY3P0CV98 308 aa8.54□□□□□ -1.04
PRDM2-201ENST00000235372 TSPY8P0CW00 308 aa8.54□□□□□ -1.04
PRDM2-201ENST00000235372 STAT6P42226 847 aa8.54□□□□□ -1.04
PRDM2-201ENST00000235372 BRDTQ58F21 947 aaPredicted RBP8.54□□□□□ -1.04
PRDM2-201ENST00000235372 SPOUT1Q5T280 376 aaKnown RBP8.54□□□□□ -1.04
PRDM2-201ENST00000235372 TMC6Q7Z403 805 aa8.54□□□□□ -1.04
PRDM2-201ENST00000235372 RAB11FIP4Q86YS3 637 aa8.54□□□□□ -1.04
PRDM2-201ENST00000235372 HSPA1LP34931 641 aa8.53□□□□□ -1.04
PRDM2-201ENST00000235372 GTF2F1P35269 517 aaKnown RBP eCLIP8.53□□□□□ -1.04
PRDM2-201ENST00000235372 GUCY1B3Q02153 619 aa8.53□□□□□ -1.04
PRDM2-201ENST00000235372 PPP1R7Q15435 360 aa8.53□□□□□ -1.04
PRDM2-201ENST00000235372 TMEM67Q5HYA8 995 aa8.53□□□□□ -1.04
PRDM2-201ENST00000235372 SH2D4BQ5SQS7 431 aa8.53□□□□□ -1.04
PRDM2-201ENST00000235372 CHD1LQ86WJ1 897 aa8.53□□□□□ -1.04
PRDM2-201ENST00000235372 CCDC125Q86Z20 511 aa8.53□□□□□ -1.04
PRDM2-201ENST00000235372 SYCE3A1L190 88 aa8.53□□□□□ -1.04
PRDM2-201ENST00000235372 GNAT3A8MTJ3 354 aa8.53□□□□□ -1.04
PRDM2-201ENST00000235372 NBPF7P0C2Y1 421 aaPredicted RBP8.53□□□□□ -1.04
PRDM2-201ENST00000235372 CLUL1Q15846 466 aa8.53□□□□□ -1.04
PRDM2-201ENST00000235372 CCDC121Q6ZUS5 278 aa8.53□□□□□ -1.04
PRDM2-201ENST00000235372 ANKLE2Q86XL3 938 aa8.53□□□□□ -1.04
PRDM2-201ENST00000235372 USH1CQ9Y6N9 552 aa8.53□□□□□ -1.04
PRDM2-201ENST00000235372 ITIH3Q06033 890 aa8.53□□□□□ -1.04
PRDM2-201ENST00000235372 PLCB4Q15147 1175 aa8.53□□□□□ -1.04
PRDM2-201ENST00000235372 ZGPATQ8N5A5 531 aaKnown RBP8.53□□□□□ -1.04
PRDM2-201ENST00000235372 HVCN1Q96D96 273 aa8.53□□□□□ -1.04
PRDM2-201ENST00000235372 CRNKL1Q9BZJ0 848 aaKnown RBP8.53□□□□□ -1.04
PRDM2-201ENST00000235372 GLRX3O76003 335 aaKnown RBP8.53□□□□□ -1.04
PRDM2-201ENST00000235372 CCT6AP40227 531 aaKnown RBP8.53□□□□□ -1.04
PRDM2-201ENST00000235372 CFAP70Q5T0N1 1121 aa8.53□□□□□ -1.04
PRDM2-201ENST00000235372 MFSD6Q6ZSS7 791 aa8.53□□□□□ -1.04
PRDM2-201ENST00000235372 ATP6V0A2Q9Y487 856 aa8.53□□□□□ -1.04
PRDM2-201ENST00000235372 FCHSD2O94868 740 aa8.53□□□□□ -1.04
PRDM2-201ENST00000235372 VCXQ9H320 206 aa8.53□□□□□ -1.04
PRDM2-201ENST00000235372 TRMT1Q9NXH9 659 aaKnown RBP8.53□□□□□ -1.04
PRDM2-201ENST00000235372 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.53□□□□□ -1.04
PRDM2-201ENST00000235372 ATP5DP30049 168 aa8.53□□□□□ -1.04
PRDM2-201ENST00000235372 PPANQ9NQ55 473 aaKnown RBP8.53□□□□□ -1.04
PRDM2-201ENST00000235372 GPHNQ9NQX3 736 aaPredicted RBP8.53□□□□□ -1.04
PRDM2-201ENST00000235372 PPME1Q9Y570 386 aa8.53□□□□□ -1.04
PRDM2-201ENST00000235372 RRP9O43818 475 aaKnown RBP8.52□□□□□ -1.04
PRDM2-201ENST00000235372 CALM1P0DP23 149 aa8.52□□□□□ -1.04
PRDM2-201ENST00000235372 CALM2P0DP24 149 aa8.52□□□□□ -1.04
PRDM2-201ENST00000235372 CALM3P0DP25 149 aa8.52□□□□□ -1.04
PRDM2-201ENST00000235372 SNW1Q13573 536 aaKnown RBP8.52□□□□□ -1.04
PRDM2-201ENST00000235372 CSRNP2Q9H175 543 aa8.52□□□□□ -1.04
PRDM2-201ENST00000235372 FAM204AQ9H8W3 233 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms