RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 ZNF652Q9Y2D9 606 aa18.13■□□□□ 0.49
CCDC47-201ENST00000225726 SCN7AQ01118 1682 aa18.12■□□□□ 0.49
CCDC47-201ENST00000225726 PDE8AO60658 829 aa18.12■□□□□ 0.49
CCDC47-201ENST00000225726 ZNF594Q96JF6 807 aaPredicted RBP18.12■□□□□ 0.49
CCDC47-201ENST00000225726 RGL2O15211 777 aa18.12■□□□□ 0.49
CCDC47-201ENST00000225726 EVI5LQ96CN4 794 aa18.12■□□□□ 0.49
CCDC47-201ENST00000225726 TAF1LQ8IZX4 1826 aa18.12■□□□□ 0.49
CCDC47-201ENST00000225726 IFIT5Q13325 482 aaKnown RBP18.11■□□□□ 0.49
CCDC47-201ENST00000225726 LAMB2P55268 1798 aa18.11■□□□□ 0.49
CCDC47-201ENST00000225726 TTLL11Q8NHH1 800 aa18.11■□□□□ 0.49
CCDC47-201ENST00000225726 UTP14AQ9BVJ6 771 aaKnown RBP18.11■□□□□ 0.49
CCDC47-201ENST00000225726 DBNLQ9UJU6 430 aaKnown RBP18.11■□□□□ 0.49
CCDC47-201ENST00000225726 LRRC24Q50LG9 513 aa18.11■□□□□ 0.49
CCDC47-201ENST00000225726 SUSD4Q5VX71 490 aa18.11■□□□□ 0.49
CCDC47-201ENST00000225726 CLEC4GQ6UXB4 293 aa18.11■□□□□ 0.49
CCDC47-201ENST00000225726 CCNL1Q9UK58 526 aaPredicted RBP18.11■□□□□ 0.49
CCDC47-201ENST00000225726 ZNF609O15014 1411 aa18.1■□□□□ 0.49
CCDC47-201ENST00000225726 SNX21Q969T3 373 aa18.1■□□□□ 0.49
CCDC47-201ENST00000225726 EPB41L2O43491 1005 aaKnown RBP18.1■□□□□ 0.49
CCDC47-201ENST00000225726 ATP5JP18859 108 aa18.1■□□□□ 0.49
CCDC47-201ENST00000225726 SH3TC1Q8TE82 1336 aa18.1■□□□□ 0.49
CCDC47-201ENST00000225726 KCNQ4P56696 695 aa18.1■□□□□ 0.49
CCDC47-201ENST00000225726 TAF7LQ5H9L4 462 aa18.1■□□□□ 0.49
CCDC47-201ENST00000225726 BCL11BQ9C0K0 894 aaPredicted RBP18.1■□□□□ 0.49
CCDC47-201ENST00000225726 BRWD3Q6RI45 1802 aa18.09■□□□□ 0.49
CCDC47-201ENST00000225726 RPS6KA4O75676 772 aa18.09■□□□□ 0.49
CCDC47-201ENST00000225726 DDX60Q8IY21 1712 aaKnown RBP18.09■□□□□ 0.49
CCDC47-201ENST00000225726 PUS3Q9BZE2 481 aaKnown RBP18.09■□□□□ 0.49
CCDC47-201ENST00000225726 NIP7Q9Y221 180 aaKnown RBP eCLIP18.09■□□□□ 0.49
CCDC47-201ENST00000225726 HSCBQ8IWL3 235 aa18.08■□□□□ 0.49
CCDC47-201ENST00000225726 ANKRD18BA2A2Z9 1011 aa18.08■□□□□ 0.49
CCDC47-201ENST00000225726 ITGA6P23229 1130 aa18.08■□□□□ 0.49
CCDC47-201ENST00000225726 DBNDD2Q9BQY9 259 aa18.08■□□□□ 0.49
CCDC47-201ENST00000225726 GREM2Q9H772 168 aa18.08■□□□□ 0.49
CCDC47-201ENST00000225726 HSP90B1P14625 803 aaKnown RBP18.08■□□□□ 0.48
CCDC47-201ENST00000225726 CCDC85AQ96PX6 553 aaPredicted RBP18.08■□□□□ 0.48
CCDC47-201ENST00000225726 BOLA2Q9H3K6 86 aa18.08■□□□□ 0.48
CCDC47-201ENST00000225726 CEP126Q9P2H0 1117 aa18.08■□□□□ 0.48
CCDC47-201ENST00000225726 LRP5O75197 1615 aa18.07■□□□□ 0.48
CCDC47-201ENST00000225726 HIP1O00291 1037 aa18.07■□□□□ 0.48
CCDC47-201ENST00000225726 SGSM2O43147 1006 aa18.07■□□□□ 0.48
CCDC47-201ENST00000225726 NTSR2O95665 410 aa18.07■□□□□ 0.48
CCDC47-201ENST00000225726 RABEP1Q15276 862 aa18.07■□□□□ 0.48
CCDC47-201ENST00000225726 RUFY2Q8WXA3 655 aa18.07■□□□□ 0.48
CCDC47-201ENST00000225726 DIAPH3Q9NSV4 1193 aa18.07■□□□□ 0.48
CCDC47-201ENST00000225726 C4BP0C0L5 1744 aa18.07■□□□□ 0.48
CCDC47-201ENST00000225726 ANO2Q9NQ90 1003 aa18.07■□□□□ 0.48
CCDC47-201ENST00000225726 MCCP23508 829 aa18.06■□□□□ 0.48
CCDC47-201ENST00000225726 FAM196AQ6ZSG2 479 aa18.06■□□□□ 0.48
CCDC47-201ENST00000225726 AKAP2Q9Y2D5 859 aa18.06■□□□□ 0.48
CCDC47-201ENST00000225726 KRT27Q7Z3Y8 459 aa18.06■□□□□ 0.48
CCDC47-201ENST00000225726 RIC1Q4ADV7 1423 aa18.05■□□□□ 0.48
CCDC47-201ENST00000225726 GNPATO15228 680 aa18.05■□□□□ 0.48
CCDC47-201ENST00000225726 NEUROD6Q96NK8 337 aa18.05■□□□□ 0.48
CCDC47-201ENST00000225726 NARFQ9UHQ1 456 aa18.05■□□□□ 0.48
CCDC47-201ENST00000225726 IL25Q9H293 177 aa18.04■□□□□ 0.48
CCDC47-201ENST00000225726 RFX7Q2KHR2 1363 aa18.04■□□□□ 0.48
CCDC47-201ENST00000225726 A0A1B0GUL7 405 aa18.04■□□□□ 0.48
CCDC47-201ENST00000225726 FAM177BA6PVY3 158 aa18.04■□□□□ 0.48
CCDC47-201ENST00000225726 ZNF772Q68DY9 489 aaPredicted RBP18.04■□□□□ 0.48
CCDC47-201ENST00000225726 HAUS7Q99871 368 aa18.04■□□□□ 0.48
CCDC47-201ENST00000225726 RTCBQ9Y3I0 505 aaKnown RBP18.04■□□□□ 0.48
CCDC47-201ENST00000225726 RIPOR2Q9Y4F9 1068 aa18.04■□□□□ 0.48
CCDC47-201ENST00000225726 HCLS1P14317 486 aaPredicted RBP18.04■□□□□ 0.48
CCDC47-201ENST00000225726 CWC27Q6UX04 472 aaKnown RBP18.04■□□□□ 0.48
CCDC47-201ENST00000225726 LDHAL6AQ6ZMR3 332 aa18.03■□□□□ 0.48
CCDC47-201ENST00000225726 RTL9Q8NET4 1388 aa18.03■□□□□ 0.48
CCDC47-201ENST00000225726 TIMM10P62072 90 aa18.03■□□□□ 0.48
CCDC47-201ENST00000225726 FSD1Q9BTV5 496 aa18.03■□□□□ 0.48
CCDC47-201ENST00000225726 COL24A1Q17RW2 1714 aa18.03■□□□□ 0.48
CCDC47-201ENST00000225726 ANAPC15P60006 121 aa18.03■□□□□ 0.48
CCDC47-201ENST00000225726 BCL2L12Q9HB09 334 aa18.02■□□□□ 0.48
CCDC47-201ENST00000225726 RAD50Q92878 1312 aa18.02■□□□□ 0.48
CCDC47-201ENST00000225726 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.02■□□□□ 0.48
CCDC47-201ENST00000225726 IL17RAQ96F46 866 aa18.02■□□□□ 0.48
CCDC47-201ENST00000225726 LSG1Q9H089 658 aaKnown RBP18.02■□□□□ 0.48
CCDC47-201ENST00000225726 CNNM1Q9NRU3 951 aa18.02■□□□□ 0.48
CCDC47-201ENST00000225726 C4AP0C0L4 1744 aa18.02■□□□□ 0.47
CCDC47-201ENST00000225726 SPEF2Q9C093 1822 aa18.02■□□□□ 0.47
CCDC47-201ENST00000225726 CCDC152Q4G0S7 254 aa18.02■□□□□ 0.47
CCDC47-201ENST00000225726 METTL24Q5JXM2 366 aa18.02■□□□□ 0.47
CCDC47-201ENST00000225726 KIAA1211Q6ZU35 1233 aa18.02■□□□□ 0.47
CCDC47-201ENST00000225726 ZPR1O75312 459 aa18.01■□□□□ 0.47
CCDC47-201ENST00000225726 RBM6P78332 1123 aaKnown RBP18.01■□□□□ 0.47
CCDC47-201ENST00000225726 USPL1Q5W0Q7 1092 aa18.01■□□□□ 0.47
CCDC47-201ENST00000225726 NMIQ13287 307 aaPredicted RBP18■□□□□ 0.47
CCDC47-201ENST00000225726 UBE2Q2Q8WVN8 375 aa18■□□□□ 0.47
CCDC47-201ENST00000225726 DNAJC2Q99543 621 aaKnown RBP18■□□□□ 0.47
CCDC47-201ENST00000225726 SNRKQ9NRH2 765 aa18■□□□□ 0.47
CCDC47-201ENST00000225726 ABCC12Q96J65 1359 aa18■□□□□ 0.47
CCDC47-201ENST00000225726 TBC1D9BQ66K14 1250 aa18■□□□□ 0.47
CCDC47-201ENST00000225726 TICAM2Q86XR7 235 aa18■□□□□ 0.47
CCDC47-201ENST00000225726 SMIM5Q71RC9 77 aa17.99■□□□□ 0.47
CCDC47-201ENST00000225726 SRP68Q9UHB9 627 aaKnown RBP17.99■□□□□ 0.47
CCDC47-201ENST00000225726 CASZ1Q86V15 1759 aa17.99■□□□□ 0.47
CCDC47-201ENST00000225726 K7ELQ4 463 aaPredicted RBP17.99■□□□□ 0.47
CCDC47-201ENST00000225726 HSPA4P34932 840 aa17.99■□□□□ 0.47
CCDC47-201ENST00000225726 VGLL2Q8N8G2 317 aa17.99■□□□□ 0.47
CCDC47-201ENST00000225726 ARHGEF1Q92888 912 aaKnown RBP17.99■□□□□ 0.47
CCDC47-201ENST00000225726 XAGE2Q96GT9 111 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms