RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 CTSWP56202 376 aa18.86■□□□□ 0.61
RPA3-201ENST00000223129 SF3B3Q15393 1217 aaKnown RBP18.86■□□□□ 0.61
RPA3-201ENST00000223129 TTLL11Q8NHH1 800 aa18.86■□□□□ 0.61
RPA3-201ENST00000223129 RPGRQ92834 1020 aaKnown RBP18.85■□□□□ 0.61
RPA3-201ENST00000223129 MASTLQ96GX5 879 aa18.85■□□□□ 0.61
RPA3-201ENST00000223129 BICC1Q9H694 974 aaKnown RBP18.85■□□□□ 0.61
RPA3-201ENST00000223129 LRRFIP2Q9Y608 721 aaKnown RBP18.85■□□□□ 0.61
RPA3-201ENST00000223129 GNAI3P08754 354 aa18.84■□□□□ 0.61
RPA3-201ENST00000223129 MYH3P11055 1940 aa18.84■□□□□ 0.61
RPA3-201ENST00000223129 NPR1P16066 1061 aa18.84■□□□□ 0.61
RPA3-201ENST00000223129 LMBR1LQ6UX01 489 aa18.84■□□□□ 0.61
RPA3-201ENST00000223129 SEC31BQ9NQW1 1179 aa18.84■□□□□ 0.61
RPA3-201ENST00000223129 DDX19BQ9UMR2 479 aa18.84■□□□□ 0.61
RPA3-201ENST00000223129 PDZRN3Q9UPQ7 1066 aa18.84■□□□□ 0.61
RPA3-201ENST00000223129 TAF1P21675 1872 aa18.83■□□□□ 0.61
RPA3-201ENST00000223129 CSF1RP07333 972 aa18.83■□□□□ 0.61
RPA3-201ENST00000223129 GREM2Q9H772 168 aa18.83■□□□□ 0.61
RPA3-201ENST00000223129 C1orf115Q9H7X2 142 aa18.83■□□□□ 0.61
RPA3-201ENST00000223129 CCDC152Q4G0S7 254 aa18.83■□□□□ 0.6
RPA3-201ENST00000223129 STYK1Q6J9G0 422 aa18.83■□□□□ 0.6
RPA3-201ENST00000223129 RBM17Q96I25 401 aaKnown RBP18.83■□□□□ 0.6
RPA3-201ENST00000223129 PIM2Q9P1W9 311 aa18.83■□□□□ 0.6
RPA3-201ENST00000223129 CHMP3Q9Y3E7 222 aa18.83■□□□□ 0.6
RPA3-201ENST00000223129 HOXA10P31260 410 aaPredicted RBP18.82■□□□□ 0.6
RPA3-201ENST00000223129 IRX6P78412 446 aaPredicted RBP18.82■□□□□ 0.6
RPA3-201ENST00000223129 DDX46Q7L014 1031 aaKnown RBP18.82■□□□□ 0.6
RPA3-201ENST00000223129 ANKRD44Q8N8A2 993 aa18.82■□□□□ 0.6
RPA3-201ENST00000223129 CRBNQ96SW2 442 aa18.82■□□□□ 0.6
RPA3-201ENST00000223129 DLEC1Q9Y238 1755 aa18.81■□□□□ 0.6
RPA3-201ENST00000223129 GNAI2P04899 355 aa18.81■□□□□ 0.6
RPA3-201ENST00000223129 FAM161AQ3B820 660 aa18.81■□□□□ 0.6
RPA3-201ENST00000223129 UTRNP46939 3433 aa18.81■□□□□ 0.6
RPA3-201ENST00000223129 COL4A1P02462 1669 aa18.81■□□□□ 0.6
RPA3-201ENST00000223129 CACNA1SQ13698 1873 aa18.8■□□□□ 0.6
RPA3-201ENST00000223129 RABL6Q3YEC7 729 aaPredicted RBP18.8■□□□□ 0.6
RPA3-201ENST00000223129 TTLL6Q8N841 843 aa18.8■□□□□ 0.6
RPA3-201ENST00000223129 CELF1Q92879 486 aaKnown RBP18.8■□□□□ 0.6
RPA3-201ENST00000223129 CRAMP1Q96RY5 1269 aa18.8■□□□□ 0.6
RPA3-201ENST00000223129 BRCA1P38398 1863 aaKnown RBP18.8■□□□□ 0.6
RPA3-201ENST00000223129 ITGA6P23229 1130 aa18.79■□□□□ 0.6
RPA3-201ENST00000223129 ALDH1B1P30837 517 aa18.79■□□□□ 0.6
RPA3-201ENST00000223129 CNKSR1Q969H4 720 aa18.79■□□□□ 0.6
RPA3-201ENST00000223129 ZBTB40Q9NUA8 1239 aa18.79■□□□□ 0.6
RPA3-201ENST00000223129 ZNF219Q9P2Y4 722 aaPredicted RBP18.79■□□□□ 0.6
RPA3-201ENST00000223129 BCS1LQ9Y276 419 aa18.79■□□□□ 0.6
RPA3-201ENST00000223129 DALRD3Q5D0E6 543 aaKnown RBP18.79■□□□□ 0.6
RPA3-201ENST00000223129 PRPF40BQ6NWY9 871 aaKnown RBP18.79■□□□□ 0.6
RPA3-201ENST00000223129 SLC51AQ86UW1 340 aa18.79■□□□□ 0.6
RPA3-201ENST00000223129 HDAC5Q9UQL6 1122 aa18.79■□□□□ 0.6
RPA3-201ENST00000223129 SLX4Q8IY92 1834 aa18.79■□□□□ 0.6
RPA3-201ENST00000223129 GRAPQ13588 217 aa18.78■□□□□ 0.6
RPA3-201ENST00000223129 GRAPLQ8TC17 118 aaPredicted RBP18.78■□□□□ 0.6
RPA3-201ENST00000223129 IFIT5Q13325 482 aaKnown RBP18.77■□□□□ 0.6
RPA3-201ENST00000223129 ZNF594Q96JF6 807 aaPredicted RBP18.77■□□□□ 0.6
RPA3-201ENST00000223129 RTL9Q8NET4 1388 aa18.76■□□□□ 0.59
RPA3-201ENST00000223129 ANKRD18BA2A2Z9 1011 aa18.76■□□□□ 0.59
RPA3-201ENST00000223129 RPS8P62241 208 aaKnown RBP18.76■□□□□ 0.59
RPA3-201ENST00000223129 CCDC57Q2TAC2 916 aa18.76■□□□□ 0.59
RPA3-201ENST00000223129 OLFM4Q6UX06 510 aa18.76■□□□□ 0.59
RPA3-201ENST00000223129 C21orf2O43822 256 aa18.76■□□□□ 0.59
RPA3-201ENST00000223129 EXOC6Q8TAG9 804 aa18.76■□□□□ 0.59
RPA3-201ENST00000223129 PPEF1O14829 653 aaPredicted RBP18.75■□□□□ 0.59
RPA3-201ENST00000223129 BBOX1O75936 387 aa18.75■□□□□ 0.59
RPA3-201ENST00000223129 YBX3P16989 372 aaKnown RBP eCLIP18.75■□□□□ 0.592e-8■■□□□ 13.2
RPA3-201ENST00000223129 ANKRD18AQ8IVF6 992 aa18.75■□□□□ 0.59
RPA3-201ENST00000223129 KLHDC4Q8TBB5 520 aa18.75■□□□□ 0.59
RPA3-201ENST00000223129 CDC5LQ99459 802 aaKnown RBP18.75■□□□□ 0.59
RPA3-201ENST00000223129 CHMP4BQ9H444 224 aaKnown RBP18.75■□□□□ 0.59
RPA3-201ENST00000223129 PNMA6EA0A0J9YXQ4 647 aa18.74■□□□□ 0.59
RPA3-201ENST00000223129 SRGAP3O43295 1099 aa18.74■□□□□ 0.59
RPA3-201ENST00000223129 C7orf43Q8WVR3 580 aa18.74■□□□□ 0.59
RPA3-201ENST00000223129 RFX5P48382 616 aaPredicted RBP18.73■□□□□ 0.59
RPA3-201ENST00000223129 GPR162Q16538 588 aa18.73■□□□□ 0.59
RPA3-201ENST00000223129 TAF7LQ5H9L4 462 aa18.73■□□□□ 0.59
RPA3-201ENST00000223129 SPEF2Q9C093 1822 aa18.73■□□□□ 0.59
RPA3-201ENST00000223129 IGHMBP2P38935 993 aaKnown RBP18.73■□□□□ 0.59
RPA3-201ENST00000223129 ATP8B2P98198 1209 aa18.73■□□□□ 0.59
RPA3-201ENST00000223129 MTX1Q13505 466 aa18.73■□□□□ 0.59
RPA3-201ENST00000223129 CEP85Q6P2H3 762 aa18.73■□□□□ 0.59
RPA3-201ENST00000223129 ATP6V0A2Q9Y487 856 aa18.72■□□□□ 0.59
RPA3-201ENST00000223129 PTPN12Q05209 780 aaKnown RBP18.71■□□□□ 0.59
RPA3-201ENST00000223129 MPHOSPH8Q99549 860 aa18.71■□□□□ 0.59
RPA3-201ENST00000223129 PUS3Q9BZE2 481 aaKnown RBP18.71■□□□□ 0.59
RPA3-201ENST00000223129 PA2G4Q9UQ80 394 aaKnown RBP18.71■□□□□ 0.59
RPA3-201ENST00000223129 SP8Q8IXZ3 490 aa18.71■□□□□ 0.59
RPA3-201ENST00000223129 BSDC1Q9NW68 430 aaPredicted RBP18.71■□□□□ 0.59
RPA3-201ENST00000223129 LDHAL6AQ6ZMR3 332 aa18.7■□□□□ 0.58
RPA3-201ENST00000223129 SIRT2Q8IXJ6 389 aa18.7■□□□□ 0.58
RPA3-201ENST00000223129 ARFGEF1Q9Y6D6 1849 aa18.7■□□□□ 0.58
RPA3-201ENST00000223129 SIL1Q9H173 461 aa18.69■□□□□ 0.58
RPA3-201ENST00000223129 PCDHB15Q9Y5E8 787 aa18.69■□□□□ 0.58
RPA3-201ENST00000223129 GTF3C3Q9Y5Q9 886 aa18.69■□□□□ 0.58
RPA3-201ENST00000223129 LRRC24Q50LG9 513 aa18.69■□□□□ 0.58
RPA3-201ENST00000223129 RPAP2Q8IXW5 612 aaPredicted RBP18.69■□□□□ 0.58
RPA3-201ENST00000223129 SSH3Q8TE77 659 aa18.69■□□□□ 0.58
RPA3-201ENST00000223129 CNNM1Q9NRU3 951 aa18.69■□□□□ 0.58
RPA3-201ENST00000223129 MINPP1Q9UNW1 487 aa18.69■□□□□ 0.58
RPA3-201ENST00000223129 POLA2Q14181 598 aa18.68■□□□□ 0.58
RPA3-201ENST00000223129 TMC4Q7Z404 712 aa18.68■□□□□ 0.58
RPA3-201ENST00000223129 ARHGAP27Q6ZUM4 889 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms