RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 TMX3Q96JJ7 454 aa13.35□□□□□ -0.27
NOD1-201ENST00000222823 SOS1Q07889 1333 aaPredicted RBP13.35□□□□□ -0.27
NOD1-201ENST00000222823 GRM8O00222 908 aa13.35□□□□□ -0.27
NOD1-201ENST00000222823 PTPN14Q15678 1187 aa13.35□□□□□ -0.27
NOD1-201ENST00000222823 CNNM3Q8NE01 707 aa13.35□□□□□ -0.27
NOD1-201ENST00000222823 CCDC66A2RUB6 948 aa13.35□□□□□ -0.27
NOD1-201ENST00000222823 KIF2AO00139 706 aaPredicted RBP13.35□□□□□ -0.27
NOD1-201ENST00000222823 TMEM67Q5HYA8 995 aa13.35□□□□□ -0.27
NOD1-201ENST00000222823 KSR2Q6VAB6 950 aa13.35□□□□□ -0.27
NOD1-201ENST00000222823 KIAA1328Q86T90 577 aa13.35□□□□□ -0.27
NOD1-201ENST00000222823 MSH6P52701 1360 aa13.34□□□□□ -0.27
NOD1-201ENST00000222823 KIAA0232Q92628 1395 aa13.34□□□□□ -0.27
NOD1-201ENST00000222823 C6orf229H3BNL8 230 aa13.34□□□□□ -0.27
NOD1-201ENST00000222823 NLRP5P59047 1200 aa13.34□□□□□ -0.27
NOD1-201ENST00000222823 RPGRQ92834 1020 aaKnown RBP13.34□□□□□ -0.27
NOD1-201ENST00000222823 BRF1Q92994 677 aa13.34□□□□□ -0.27
NOD1-201ENST00000222823 EYA1Q99502 592 aa13.34□□□□□ -0.27
NOD1-201ENST00000222823 RAB34Q9BZG1 259 aa13.34□□□□□ -0.27
NOD1-201ENST00000222823 ZCRB1Q8TBF4 217 aaKnown RBP13.34□□□□□ -0.27
NOD1-201ENST00000222823 SEPT11Q9NVA2 429 aaKnown RBP13.34□□□□□ -0.27
NOD1-201ENST00000222823 FBXO3Q9UK99 471 aa13.34□□□□□ -0.27
NOD1-201ENST00000222823 NRXN1Q9ULB1 1477 aa13.34□□□□□ -0.27
NOD1-201ENST00000222823 PLEKHG3A1L390 1219 aa13.34□□□□□ -0.27
NOD1-201ENST00000222823 GOLGA6L10A6NI86 522 aa13.34□□□□□ -0.27
NOD1-201ENST00000222823 PPFIA3O75145 1194 aa13.34□□□□□ -0.27
NOD1-201ENST00000222823 LDHCP07864 332 aa13.34□□□□□ -0.27
NOD1-201ENST00000222823 ANAPC15P60006 121 aa13.34□□□□□ -0.27
NOD1-201ENST00000222823 AKAP4Q5JQC9 854 aa13.34□□□□□ -0.27
NOD1-201ENST00000222823 LMBR1LQ6UX01 489 aa13.34□□□□□ -0.27
NOD1-201ENST00000222823 LEKR1Q6ZMV7 388 aa13.34□□□□□ -0.27
NOD1-201ENST00000222823 NCOA7Q8NI08 942 aa13.34□□□□□ -0.27
NOD1-201ENST00000222823 USP26Q9BXU7 913 aa13.34□□□□□ -0.27
NOD1-201ENST00000222823 TOP1P11387 765 aaKnown RBP13.33□□□□□ -0.27
NOD1-201ENST00000222823 SLF2Q8IX21 1173 aa13.33□□□□□ -0.28
NOD1-201ENST00000222823 NPHP3Q7Z494 1330 aa13.33□□□□□ -0.28
NOD1-201ENST00000222823 SBNO1A3KN83 1393 aa13.33□□□□□ -0.28
NOD1-201ENST00000222823 EIF3JO75822 258 aaKnown RBP13.33□□□□□ -0.28
NOD1-201ENST00000222823 ZNF165P49910 485 aa13.33□□□□□ -0.28
NOD1-201ENST00000222823 ZNF397Q8NF99 534 aaPredicted RBP13.33□□□□□ -0.28
NOD1-201ENST00000222823 LINS1Q8NG48 757 aa13.33□□□□□ -0.28
NOD1-201ENST00000222823 ESYT1Q9BSJ8 1104 aa13.33□□□□□ -0.28
NOD1-201ENST00000222823 TBX22Q9Y458 520 aa13.33□□□□□ -0.28
NOD1-201ENST00000222823 PPP1R12BO60237 982 aaPredicted RBP13.33□□□□□ -0.28
NOD1-201ENST00000222823 CCDC96Q2M329 555 aa13.33□□□□□ -0.28
NOD1-201ENST00000222823 MFSD6Q6ZSS7 791 aa13.33□□□□□ -0.28
NOD1-201ENST00000222823 TCEANC2Q96MN5 208 aa13.33□□□□□ -0.28
NOD1-201ENST00000222823 UQCRFS1P1P0C7P4 283 aa13.32□□□□□ -0.28
NOD1-201ENST00000222823 UBE2HP62256 183 aa13.32□□□□□ -0.28
NOD1-201ENST00000222823 TSPYL1Q9H0U9 437 aa13.32□□□□□ -0.28
NOD1-201ENST00000222823 CLIP2Q9UDT6 1046 aa13.32□□□□□ -0.28
NOD1-201ENST00000222823 ZSCAN12O43309 604 aa13.32□□□□□ -0.28
NOD1-201ENST00000222823 CCDC144CPQ8IYA2 1237 aa13.32□□□□□ -0.28
NOD1-201ENST00000222823 TMEM2Q9UHN6 1383 aa13.32□□□□□ -0.28
NOD1-201ENST00000222823 TSPY2A6NKD2 308 aa13.32□□□□□ -0.28
NOD1-201ENST00000222823 BIN1O00499 593 aa13.32□□□□□ -0.28
NOD1-201ENST00000222823 ZFYP08048 801 aaPredicted RBP13.32□□□□□ -0.28
NOD1-201ENST00000222823 MCM5P33992 734 aa13.32□□□□□ -0.28
NOD1-201ENST00000222823 IQCEQ6IPM2 695 aa13.32□□□□□ -0.28
NOD1-201ENST00000222823 PAF1Q8N7H5 531 aa13.32□□□□□ -0.28
NOD1-201ENST00000222823 KIF18AQ8NI77 898 aa13.32□□□□□ -0.28
NOD1-201ENST00000222823 MED14O60244 1454 aa13.32□□□□□ -0.28
NOD1-201ENST00000222823 USP19O94966 1318 aa13.32□□□□□ -0.28
NOD1-201ENST00000222823 DEPDC5O75140 1603 aa13.31□□□□□ -0.28
NOD1-201ENST00000222823 NEFHP12036 1026 aa13.31□□□□□ -0.28
NOD1-201ENST00000222823 METAP2P50579 478 aaKnown RBP eCLIP13.31□□□□□ -0.28
NOD1-201ENST00000222823 RAB11FIP4Q86YS3 637 aa13.31□□□□□ -0.28
NOD1-201ENST00000222823 NECAB1Q8N987 351 aa13.31□□□□□ -0.28
NOD1-201ENST00000222823 VWDEQ8N2E2 1590 aa13.31□□□□□ -0.28
NOD1-201ENST00000222823 PANK2Q9BZ23 570 aa13.31□□□□□ -0.28
NOD1-201ENST00000222823 RBM8AQ9Y5S9 174 aaKnown RBP13.31□□□□□ -0.28
NOD1-201ENST00000222823 TULP4Q9NRJ4 1543 aa13.31□□□□□ -0.28
NOD1-201ENST00000222823 ZNF853P0CG23 659 aa13.31□□□□□ -0.28
NOD1-201ENST00000222823 ATP2B3Q16720 1220 aa13.31□□□□□ -0.28
NOD1-201ENST00000222823 TAF4BQ92750 862 aa13.31□□□□□ -0.28
NOD1-201ENST00000222823 BAG3O95817 575 aa13.31□□□□□ -0.28
NOD1-201ENST00000222823 KIF5BP33176 963 aa13.31□□□□□ -0.28
NOD1-201ENST00000222823 FKBP15Q5T1M5 1219 aa13.31□□□□□ -0.28
NOD1-201ENST00000222823 MAP3K5Q99683 1374 aa13.3□□□□□ -0.28
NOD1-201ENST00000222823 KIDINS220Q9ULH0 1771 aa13.3□□□□□ -0.28
NOD1-201ENST00000222823 PDE4BQ07343 736 aa13.3□□□□□ -0.28
NOD1-201ENST00000222823 TMEM266Q2M3C6 531 aa13.3□□□□□ -0.28
NOD1-201ENST00000222823 LRRC59Q96AG4 307 aaKnown RBP13.3□□□□□ -0.28
NOD1-201ENST00000222823 BABAM1Q9NWV8 329 aa13.3□□□□□ -0.28
NOD1-201ENST00000222823 DCAF8L1A6NGE4 600 aa13.3□□□□□ -0.28
NOD1-201ENST00000222823 IL15P40933 162 aaPredicted RBP13.3□□□□□ -0.28
NOD1-201ENST00000222823 SPA17Q15506 151 aa13.3□□□□□ -0.28
NOD1-201ENST00000222823 ZSCAN16Q9H4T2 348 aaPredicted RBP13.3□□□□□ -0.28
NOD1-201ENST00000222823 METP08581 1390 aa13.3□□□□□ -0.28
NOD1-201ENST00000222823 CDK12Q9NYV4 1490 aaPredicted RBP13.3□□□□□ -0.28
NOD1-201ENST00000222823 ARHGEF10O15013 1369 aa13.3□□□□□ -0.28
NOD1-201ENST00000222823 KLF18A0A0U1RQI7 1052 aa13.29□□□□□ -0.28
NOD1-201ENST00000222823 TNIP1Q15025 636 aa13.29□□□□□ -0.28
NOD1-201ENST00000222823 G2E3Q7L622 706 aa13.29□□□□□ -0.28
NOD1-201ENST00000222823 CENPHQ9H3R5 247 aa13.29□□□□□ -0.28
NOD1-201ENST00000222823 KAT6BQ8WYB5 2073 aa13.29□□□□□ -0.28
NOD1-201ENST00000222823 URI1O94763 535 aaPredicted RBP13.29□□□□□ -0.28
NOD1-201ENST00000222823 ZSCAN22P10073 491 aaPredicted RBP13.29□□□□□ -0.28
NOD1-201ENST00000222823 UBA7P41226 1012 aa13.29□□□□□ -0.28
NOD1-201ENST00000222823 CACNA2D4Q7Z3S7 1137 aa13.29□□□□□ -0.28
NOD1-201ENST00000222823 SLC26A6Q9BXS9 759 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms