RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 FAM184AQ8NB25 1140 aa25.12■■□□□ 1.61
CCDC130-201ENST00000221554 GPR108Q9NPR9 543 aa25.12■■□□□ 1.61
CCDC130-201ENST00000221554 NSFL1CQ9UNZ2 370 aaKnown RBP25.12■■□□□ 1.61
CCDC130-201ENST00000221554 GJB2P29033 226 aa25.11■■□□□ 1.61
CCDC130-201ENST00000221554 USPL1Q5W0Q7 1092 aa25.11■■□□□ 1.61
CCDC130-201ENST00000221554 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.11■■□□□ 1.61
CCDC130-201ENST00000221554 A0A0D9SFI3 127 aa25.1■■□□□ 1.61
CCDC130-201ENST00000221554 CCDC83Q8IWF9 413 aa25.1■■□□□ 1.61
CCDC130-201ENST00000221554 TFCP2Q12800 502 aa25.1■■□□□ 1.61
CCDC130-201ENST00000221554 KLHDC4Q8TBB5 520 aa25.1■■□□□ 1.61
CCDC130-201ENST00000221554 DBNLQ9UJU6 430 aaKnown RBP25.1■■□□□ 1.61
CCDC130-201ENST00000221554 CCDC183Q5T5S1 534 aa25.09■■□□□ 1.61
CCDC130-201ENST00000221554 CHAMP1Q96JM3 812 aa25.09■■□□□ 1.61
CCDC130-201ENST00000221554 HAUS7Q99871 368 aa25.09■■□□□ 1.61
CCDC130-201ENST00000221554 CWC25Q9NXE8 425 aaPredicted RBP25.09■■□□□ 1.61
CCDC130-201ENST00000221554 U3KPZ7 1027 aaPredicted RBP25.09■■□□□ 1.61
CCDC130-201ENST00000221554 RPS6KB1P23443 525 aa25.08■■□□□ 1.61
CCDC130-201ENST00000221554 UVSSAQ2YD98 709 aa25.08■■□□□ 1.61
CCDC130-201ENST00000221554 ATG3Q9NT62 314 aa25.08■■□□□ 1.61
CCDC130-201ENST00000221554 TAF5LO75529 589 aa25.08■■□□□ 1.6
CCDC130-201ENST00000221554 CPA1P15085 419 aa25.08■■□□□ 1.6
CCDC130-201ENST00000221554 CCDC191Q8NCU4 936 aa25.08■■□□□ 1.6
CCDC130-201ENST00000221554 PRDM11Q9NQV5 511 aa25.08■■□□□ 1.6
CCDC130-201ENST00000221554 GLI3P10071 1580 aa25.07■■□□□ 1.6
CCDC130-201ENST00000221554 MSNP26038 577 aaKnown RBP25.07■■□□□ 1.6
CCDC130-201ENST00000221554 ME3Q16798 604 aa25.07■■□□□ 1.6
CCDC130-201ENST00000221554 TOM1L2Q6ZVM7 507 aa25.07■■□□□ 1.6
CCDC130-201ENST00000221554 MTMR6Q9Y217 621 aa25.07■■□□□ 1.6
CCDC130-201ENST00000221554 LARGE1O95461 756 aa25.06■■□□□ 1.6
CCDC130-201ENST00000221554 UBR2Q8IWV8 1755 aa25.06■■□□□ 1.6
CCDC130-201ENST00000221554 ATP5J2-PTCD1G3V325 749 aa25.05■■□□□ 1.6
CCDC130-201ENST00000221554 PTCD1O75127 700 aaKnown RBP25.05■■□□□ 1.6
CCDC130-201ENST00000221554 MCM5P33992 734 aa25.05■■□□□ 1.6
CCDC130-201ENST00000221554 LMBR1LQ6UX01 489 aa25.05■■□□□ 1.6
CCDC130-201ENST00000221554 CARD10Q9BWT7 1032 aa25.05■■□□□ 1.6
CCDC130-201ENST00000221554 GADD45BO75293 160 aaPredicted RBP25.05■■□□□ 1.6
CCDC130-201ENST00000221554 IL15P40933 162 aaPredicted RBP25.05■■□□□ 1.6
CCDC130-201ENST00000221554 FOXO4P98177 505 aa25.05■■□□□ 1.6
CCDC130-201ENST00000221554 MCMDC2Q4G0Z9 681 aa25.05■■□□□ 1.6
CCDC130-201ENST00000221554 TPCN1Q9ULQ1 816 aa25.05■■□□□ 1.6
CCDC130-201ENST00000221554 CNPY2Q9Y2B0 182 aa25.05■■□□□ 1.6
CCDC130-201ENST00000221554 IL2RBP14784 551 aa25.04■■□□□ 1.6
CCDC130-201ENST00000221554 ILDR1Q86SU0 546 aaPredicted RBP25.04■■□□□ 1.6
CCDC130-201ENST00000221554 ABCA3Q99758 1704 aa25.04■■□□□ 1.6
CCDC130-201ENST00000221554 NBPF26B4DH59 902 aa25.03■■□□□ 1.6
CCDC130-201ENST00000221554 NBPF14Q5TI25 921 aa25.03■■□□□ 1.6
CCDC130-201ENST00000221554 LARP1BQ659C4 914 aaKnown RBP25.03■■□□□ 1.6
CCDC130-201ENST00000221554 NBPF10Q6P3W6 841 aaKnown RBP25.03■■□□□ 1.6
CCDC130-201ENST00000221554 NBPF15Q8N660 670 aa25.03■■□□□ 1.6
CCDC130-201ENST00000221554 LARP6Q9BRS8 491 aaKnown RBP25.03■■□□□ 1.6
CCDC130-201ENST00000221554 CIAO1O76071 339 aa25.03■■□□□ 1.6
CCDC130-201ENST00000221554 HMGB1P09429 215 aaKnown RBP25.03■■□□□ 1.6
CCDC130-201ENST00000221554 KBTBD3Q8NAB2 608 aa25.03■■□□□ 1.6
CCDC130-201ENST00000221554 GDPD2Q9HCC8 539 aa25.03■■□□□ 1.6
CCDC130-201ENST00000221554 CCDC39Q9UFE4 941 aa25.03■■□□□ 1.6
CCDC130-201ENST00000221554 FBXO3Q9UK99 471 aa25.03■■□□□ 1.6
CCDC130-201ENST00000221554 SH3TC1Q8TE82 1336 aa25.02■■□□□ 1.6
CCDC130-201ENST00000221554 DBNDD2Q9BQY9 259 aa25.02■■□□□ 1.6
CCDC130-201ENST00000221554 HELLSQ9NRZ9 838 aa25.02■■□□□ 1.6
CCDC130-201ENST00000221554 NOL7Q9UMY1 257 aaKnown RBP25.02■■□□□ 1.6
CCDC130-201ENST00000221554 COL22A1Q8NFW1 1626 aaPredicted RBP25.02■■□□□ 1.6
CCDC130-201ENST00000221554 PALLDQ8WX93 1383 aa25.02■■□□□ 1.6
CCDC130-201ENST00000221554 COL5A2P05997 1499 aaPredicted RBP25.02■■□□□ 1.6
CCDC130-201ENST00000221554 PAPPAQ13219 1627 aa25.01■■□□□ 1.59
CCDC130-201ENST00000221554 PIP4K2AP48426 406 aaPredicted RBP25.01■■□□□ 1.59
CCDC130-201ENST00000221554 FOXD4L6Q3SYB3 417 aaPredicted RBP25.01■■□□□ 1.59
CCDC130-201ENST00000221554 FOXD4L3Q6VB84 417 aaPredicted RBP25.01■■□□□ 1.59
CCDC130-201ENST00000221554 ZNF589Q86UQ0 364 aaPredicted RBP25.01■■□□□ 1.59
CCDC130-201ENST00000221554 TEX13AQ9BXU3 409 aaPredicted RBP25.01■■□□□ 1.59
CCDC130-201ENST00000221554 NEK1Q96PY6 1258 aa25■■□□□ 1.59
CCDC130-201ENST00000221554 NUP188Q5SRE5 1749 aa25■■□□□ 1.59
CCDC130-201ENST00000221554 KCPQ6ZWJ8 1503 aa25■■□□□ 1.59
CCDC130-201ENST00000221554 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25■■□□□ 1.59
CCDC130-201ENST00000221554 CHMP4CQ96CF2 233 aa25■■□□□ 1.59
CCDC130-201ENST00000221554 TNS2Q63HR2 1409 aa24.99■■□□□ 1.59
CCDC130-201ENST00000221554 KRT85P78386 507 aa24.99■■□□□ 1.59
CCDC130-201ENST00000221554 ST3GAL1Q11201 340 aa24.99■■□□□ 1.59
CCDC130-201ENST00000221554 LRRFIP1Q32MZ4 808 aaKnown RBP24.99■■□□□ 1.59
CCDC130-201ENST00000221554 JARID2Q92833 1246 aaPredicted RBP24.99■■□□□ 1.59
CCDC130-201ENST00000221554 ELP1O95163 1332 aa24.99■■□□□ 1.59
CCDC130-201ENST00000221554 DNAJC2Q99543 621 aaKnown RBP24.98■■□□□ 1.59
CCDC130-201ENST00000221554 ANO8Q9HCE9 1232 aaPredicted RBP24.98■■□□□ 1.59
CCDC130-201ENST00000221554 CHMP3Q9Y3E7 222 aa24.98■■□□□ 1.59
CCDC130-201ENST00000221554 VPS37CA5D8V6 355 aaPredicted RBP24.98■■□□□ 1.59
CCDC130-201ENST00000221554 EYA2O00167 538 aa24.98■■□□□ 1.59
CCDC130-201ENST00000221554 TOB2Q14106 344 aaPredicted RBP24.98■■□□□ 1.59
CCDC130-201ENST00000221554 ATG9AQ7Z3C6 839 aa24.98■■□□□ 1.59
CCDC130-201ENST00000221554 NECAB1Q8N987 351 aa24.98■■□□□ 1.59
CCDC130-201ENST00000221554 TCHHQ07283 1943 aa24.97■■□□□ 1.59
CCDC130-201ENST00000221554 DSCC1Q9BVC3 393 aa24.97■■□□□ 1.59
CCDC130-201ENST00000221554 ZNF609O15014 1411 aa24.96■■□□□ 1.59
CCDC130-201ENST00000221554 FIBPO43427 364 aa24.96■■□□□ 1.59
CCDC130-201ENST00000221554 DNM1Q05193 864 aaKnown RBP24.96■■□□□ 1.59
CCDC130-201ENST00000221554 TRIM28Q13263 835 aaKnown RBP24.96■■□□□ 1.59
CCDC130-201ENST00000221554 TTLL7Q6ZT98 887 aa24.96■■□□□ 1.59
CCDC130-201ENST00000221554 NAP1L5Q96NT1 182 aaPredicted RBP24.96■■□□□ 1.59
CCDC130-201ENST00000221554 SPEF2Q9C093 1822 aa24.96■■□□□ 1.59
CCDC130-201ENST00000221554 VSIG10Q8N0Z9 540 aa24.95■■□□□ 1.59
CCDC130-201ENST00000221554 EDC3Q96F86 508 aaKnown RBP24.95■■□□□ 1.59
CCDC130-201ENST00000221554 SCAND2PQ9GZW5 306 aaPredicted RBP24.95■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms