RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 KCNA3P22001 575 aa33.5■■■□□ 2.95
STUB1-201ENST00000219548 CTSWP56202 376 aa33.5■■■□□ 2.95
STUB1-201ENST00000219548 PDZRN3Q9UPQ7 1066 aa33.5■■■□□ 2.95
STUB1-201ENST00000219548 FOXO4P98177 505 aa33.49■■■□□ 2.95
STUB1-201ENST00000219548 SF3B3Q15393 1217 aaKnown RBP33.49■■■□□ 2.95
STUB1-201ENST00000219548 RPGRQ92834 1020 aaKnown RBP33.49■■■□□ 2.95
STUB1-201ENST00000219548 ZNF622Q969S3 477 aaKnown RBP eCLIP33.49■■■□□ 2.954e-6■□□□□ 8.2
STUB1-201ENST00000219548 GNAI3P08754 354 aa33.48■■■□□ 2.95
STUB1-201ENST00000219548 COL4A1P02462 1669 aa33.47■■■□□ 2.95
STUB1-201ENST00000219548 ZBTB7BO15156 539 aaPredicted RBP33.47■■■□□ 2.95
STUB1-201ENST00000219548 NPR1P16066 1061 aa33.47■■■□□ 2.95
STUB1-201ENST00000219548 TTLL11Q8NHH1 800 aa33.47■■■□□ 2.95
STUB1-201ENST00000219548 MASTLQ96GX5 879 aa33.47■■■□□ 2.95
STUB1-201ENST00000219548 BICC1Q9H694 974 aaKnown RBP33.47■■■□□ 2.95
STUB1-201ENST00000219548 LRRFIP2Q9Y608 721 aaKnown RBP33.47■■■□□ 2.95
STUB1-201ENST00000219548 SLX4Q8IY92 1834 aa33.46■■■□□ 2.95
STUB1-201ENST00000219548 DDX19BQ9UMR2 479 aa33.46■■■□□ 2.95
STUB1-201ENST00000219548 SPEF2Q9C093 1822 aa33.45■■■□□ 2.95
STUB1-201ENST00000219548 CCDC152Q4G0S7 254 aa33.44■■■□□ 2.94
STUB1-201ENST00000219548 STYK1Q6J9G0 422 aa33.44■■■□□ 2.94
STUB1-201ENST00000219548 LMBR1LQ6UX01 489 aa33.44■■■□□ 2.94
STUB1-201ENST00000219548 GREM2Q9H772 168 aa33.44■■■□□ 2.94
STUB1-201ENST00000219548 CSF1RP07333 972 aa33.43■■■□□ 2.94
STUB1-201ENST00000219548 HOXA10P31260 410 aaPredicted RBP33.43■■■□□ 2.94
STUB1-201ENST00000219548 FAM161AQ3B820 660 aa33.43■■■□□ 2.94
STUB1-201ENST00000219548 ANKRD44Q8N8A2 993 aa33.43■■■□□ 2.94
STUB1-201ENST00000219548 RBM17Q96I25 401 aaKnown RBP33.43■■■□□ 2.94
STUB1-201ENST00000219548 C1orf115Q9H7X2 142 aa33.43■■■□□ 2.94
STUB1-201ENST00000219548 PIM2Q9P1W9 311 aa33.43■■■□□ 2.94
STUB1-201ENST00000219548 CHMP3Q9Y3E7 222 aa33.43■■■□□ 2.94
STUB1-201ENST00000219548 DDX46Q7L014 1031 aaKnown RBP33.42■■■□□ 2.94
STUB1-201ENST00000219548 SEC31BQ9NQW1 1179 aa33.42■■■□□ 2.94
STUB1-201ENST00000219548 UTRNP46939 3433 aa33.41■■■□□ 2.94
STUB1-201ENST00000219548 CRBNQ96SW2 442 aa33.41■■■□□ 2.94
STUB1-201ENST00000219548 GNAI2P04899 355 aa33.4■■■□□ 2.94
STUB1-201ENST00000219548 RABL6Q3YEC7 729 aaPredicted RBP33.39■■■□□ 2.94
STUB1-201ENST00000219548 CRAMP1Q96RY5 1269 aa33.39■■■□□ 2.94
STUB1-201ENST00000219548 ARFGEF1Q9Y6D6 1849 aa33.39■■■□□ 2.94
STUB1-201ENST00000219548 TTLL6Q8N841 843 aa33.38■■■□□ 2.93
STUB1-201ENST00000219548 CNKSR1Q969H4 720 aa33.38■■■□□ 2.93
STUB1-201ENST00000219548 HDAC5Q9UQL6 1122 aa33.38■■■□□ 2.93
STUB1-201ENST00000219548 RTL9Q8NET4 1388 aa33.38■■■□□ 2.93
STUB1-201ENST00000219548 PRPF40BQ6NWY9 871 aaKnown RBP33.37■■■□□ 2.93
STUB1-201ENST00000219548 CELF1Q92879 486 aaKnown RBP33.37■■■□□ 2.93
STUB1-201ENST00000219548 ITGA6P23229 1130 aa33.37■■■□□ 2.93
STUB1-201ENST00000219548 ALDH1B1P30837 517 aa33.37■■■□□ 2.93
STUB1-201ENST00000219548 IRX6P78412 446 aaPredicted RBP33.37■■■□□ 2.93
STUB1-201ENST00000219548 DALRD3Q5D0E6 543 aaKnown RBP33.37■■■□□ 2.93
STUB1-201ENST00000219548 BCS1LQ9Y276 419 aa33.37■■■□□ 2.93
STUB1-201ENST00000219548 GRAPQ13588 217 aa33.36■■■□□ 2.93
STUB1-201ENST00000219548 GRAPLQ8TC17 118 aaPredicted RBP33.36■■■□□ 2.93
STUB1-201ENST00000219548 ZBTB40Q9NUA8 1239 aa33.36■■■□□ 2.93
STUB1-201ENST00000219548 PELP1Q8IZL8 1130 aaKnown RBP33.35■■■□□ 2.93
STUB1-201ENST00000219548 SLC51AQ86UW1 340 aa33.34■■■□□ 2.93
STUB1-201ENST00000219548 ZNF219Q9P2Y4 722 aaPredicted RBP33.34■■■□□ 2.93
STUB1-201ENST00000219548 IFIT5Q13325 482 aaKnown RBP33.32■■■□□ 2.92
STUB1-201ENST00000219548 CHMP4BQ9H444 224 aaKnown RBP33.32■■■□□ 2.92
STUB1-201ENST00000219548 ANKRD18BA2A2Z9 1011 aa33.31■■■□□ 2.92
STUB1-201ENST00000219548 PPEF1O14829 653 aaPredicted RBP33.31■■■□□ 2.92
STUB1-201ENST00000219548 CCDC57Q2TAC2 916 aa33.31■■■□□ 2.92
STUB1-201ENST00000219548 CDC5LQ99459 802 aaKnown RBP33.31■■■□□ 2.92
STUB1-201ENST00000219548 YBX3P16989 372 aaKnown RBP eCLIP33.3■■■□□ 2.926e-9■■■□□ 15.7
STUB1-201ENST00000219548 RPS8P62241 208 aaKnown RBP33.3■■■□□ 2.92
STUB1-201ENST00000219548 OLFM4Q6UX06 510 aa33.3■■■□□ 2.92
STUB1-201ENST00000219548 ANKRD18AQ8IVF6 992 aa33.3■■■□□ 2.92
STUB1-201ENST00000219548 ZNF594Q96JF6 807 aaPredicted RBP33.3■■■□□ 2.92
STUB1-201ENST00000219548 LRRC37AA6NMS7 1700 aa33.29■■■□□ 2.92
STUB1-201ENST00000219548 C21orf2O43822 256 aa33.28■■■□□ 2.92
STUB1-201ENST00000219548 BBOX1O75936 387 aa33.28■■■□□ 2.92
STUB1-201ENST00000219548 MTX1Q13505 466 aa33.27■■■□□ 2.92
STUB1-201ENST00000219548 EXOC6Q8TAG9 804 aa33.27■■■□□ 2.92
STUB1-201ENST00000219548 PNMA6EA0A0J9YXQ4 647 aa33.26■■■□□ 2.92
STUB1-201ENST00000219548 SRGAP3O43295 1099 aa33.26■■■□□ 2.92
STUB1-201ENST00000219548 TAF7LQ5H9L4 462 aa33.26■■■□□ 2.92
STUB1-201ENST00000219548 KLHDC4Q8TBB5 520 aa33.26■■■□□ 2.92
STUB1-201ENST00000219548 C7orf43Q8WVR3 580 aa33.26■■■□□ 2.92
STUB1-201ENST00000219548 IGHMBP2P38935 993 aaKnown RBP33.25■■■□□ 2.91
STUB1-201ENST00000219548 RFX5P48382 616 aaPredicted RBP33.25■■■□□ 2.91
STUB1-201ENST00000219548 CEP85Q6P2H3 762 aa33.25■■■□□ 2.91
STUB1-201ENST00000219548 GPR162Q16538 588 aa33.25■■■□□ 2.91
STUB1-201ENST00000219548 A0A1B0GUL6 1792 aa33.24■■■□□ 2.91
STUB1-201ENST00000219548 ATP6V0A2Q9Y487 856 aa33.24■■■□□ 2.91
STUB1-201ENST00000219548 FER1L6Q2WGJ9 1857 aa33.23■■■□□ 2.91
STUB1-201ENST00000219548 ATP8B2P98198 1209 aa33.23■■■□□ 2.91
STUB1-201ENST00000219548 MPHOSPH8Q99549 860 aa33.22■■■□□ 2.91
STUB1-201ENST00000219548 PTPN12Q05209 780 aaKnown RBP33.21■■■□□ 2.91
STUB1-201ENST00000219548 TMC4Q7Z404 712 aa33.21■■■□□ 2.91
STUB1-201ENST00000219548 SP8Q8IXZ3 490 aa33.21■■■□□ 2.91
STUB1-201ENST00000219548 BSDC1Q9NW68 430 aaPredicted RBP33.21■■■□□ 2.91
STUB1-201ENST00000219548 PA2G4Q9UQ80 394 aaKnown RBP33.21■■■□□ 2.91
STUB1-201ENST00000219548 LDHAL6AQ6ZMR3 332 aa33.19■■■□□ 2.9
STUB1-201ENST00000219548 PUS3Q9BZE2 481 aaKnown RBP33.19■■■□□ 2.9
STUB1-201ENST00000219548 SIL1Q9H173 461 aa33.18■■■□□ 2.9
STUB1-201ENST00000219548 SNED1Q8TER0 1413 aa33.18■■■□□ 2.9
STUB1-201ENST00000219548 LTBP1Q14766 1721 aa33.18■■■□□ 2.9
STUB1-201ENST00000219548 POLA2Q14181 598 aa33.18■■■□□ 2.9
STUB1-201ENST00000219548 CCDC93Q567U6 631 aa33.18■■■□□ 2.9
STUB1-201ENST00000219548 SIRT2Q8IXJ6 389 aa33.18■■■□□ 2.9
STUB1-201ENST00000219548 SSH3Q8TE77 659 aa33.18■■■□□ 2.9
STUB1-201ENST00000219548 CNNM1Q9NRU3 951 aa33.18■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms