RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 ATF7IPQ6VMQ6 1270 aa16.61■□□□□ 0.25
SPTLC2-201ENST00000216484 SDCCAG8Q86SQ7 713 aaPredicted RBP16.61■□□□□ 0.25
SPTLC2-201ENST00000216484 JAKMIP2Q96AA8 810 aa16.61■□□□□ 0.25
SPTLC2-201ENST00000216484 BUB1BO60566 1050 aaPredicted RBP16.61■□□□□ 0.25
SPTLC2-201ENST00000216484 STMN1P16949 149 aa16.61■□□□□ 0.25
SPTLC2-201ENST00000216484 HSP90AA4PQ58FG1 418 aa16.61■□□□□ 0.25
SPTLC2-201ENST00000216484 GKAP1Q5VSY0 366 aaPredicted RBP16.61■□□□□ 0.25
SPTLC2-201ENST00000216484 PPFIBP2Q8ND30 876 aa16.61■□□□□ 0.25
SPTLC2-201ENST00000216484 MPHOSPH6Q99547 160 aaKnown RBP16.61■□□□□ 0.25
SPTLC2-201ENST00000216484 ZPR1O75312 459 aa16.61■□□□□ 0.25
SPTLC2-201ENST00000216484 CYLC1P35663 651 aaPredicted RBP16.61■□□□□ 0.25
SPTLC2-201ENST00000216484 SULT6B1Q6IMI4 303 aa16.61■□□□□ 0.25
SPTLC2-201ENST00000216484 FCHSD2O94868 740 aa16.61■□□□□ 0.25
SPTLC2-201ENST00000216484 MVPQ14764 893 aaKnown RBP16.61■□□□□ 0.25
SPTLC2-201ENST00000216484 UBLCP1Q8WVY7 318 aaPredicted RBP16.61■□□□□ 0.25
SPTLC2-201ENST00000216484 FAM212AQ96EL1 285 aa16.61■□□□□ 0.25
SPTLC2-201ENST00000216484 ZNF652Q9Y2D9 606 aa16.61■□□□□ 0.25
SPTLC2-201ENST00000216484 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.61■□□□□ 0.258e-7■■□□□ 11.7
SPTLC2-201ENST00000216484 NEDD9Q14511 834 aa16.61■□□□□ 0.25
SPTLC2-201ENST00000216484 LARP6Q9BRS8 491 aaKnown RBP16.61■□□□□ 0.25
SPTLC2-201ENST00000216484 IRX5P78411 483 aaPredicted RBP16.6■□□□□ 0.25
SPTLC2-201ENST00000216484 CTAGE15A4D2H0 777 aa16.6■□□□□ 0.25
SPTLC2-201ENST00000216484 MGEA5O60502 916 aa16.6■□□□□ 0.25
SPTLC2-201ENST00000216484 CTAGE8P0CG41 777 aa16.6■□□□□ 0.25
SPTLC2-201ENST00000216484 RASA3Q14644 834 aa16.6■□□□□ 0.25
SPTLC2-201ENST00000216484 CTAGE4Q8IX94 777 aa16.6■□□□□ 0.25
SPTLC2-201ENST00000216484 SEPT8Q92599 483 aa16.6■□□□□ 0.25
SPTLC2-201ENST00000216484 SH2B1Q9NRF2 756 aaPredicted RBP16.6■□□□□ 0.25
SPTLC2-201ENST00000216484 BRD4O60885 1362 aaPredicted RBP16.6■□□□□ 0.25
SPTLC2-201ENST00000216484 STAT6P42226 847 aa16.6■□□□□ 0.25
SPTLC2-201ENST00000216484 GSDMBQ8TAX9 411 aa16.6■□□□□ 0.25
SPTLC2-201ENST00000216484 PYM1Q9BRP8 204 aaKnown RBP16.6■□□□□ 0.25
SPTLC2-201ENST00000216484 SPAG5Q96R06 1193 aa16.6■□□□□ 0.25
SPTLC2-201ENST00000216484 BICDL2A1A5D9 508 aa16.59■□□□□ 0.25
SPTLC2-201ENST00000216484 MAP3K12Q12852 859 aa16.59■□□□□ 0.25
SPTLC2-201ENST00000216484 ATP2B3Q16720 1220 aa16.59■□□□□ 0.25
SPTLC2-201ENST00000216484 USP37Q86T82 979 aa16.59■□□□□ 0.25
SPTLC2-201ENST00000216484 DIXDC1Q155Q3 683 aa16.59■□□□□ 0.25
SPTLC2-201ENST00000216484 LRRC43Q8N309 656 aa16.59■□□□□ 0.25
SPTLC2-201ENST00000216484 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.59■□□□□ 0.25
SPTLC2-201ENST00000216484 SH2D4BQ5SQS7 431 aa16.59■□□□□ 0.25
SPTLC2-201ENST00000216484 ARHGEF2Q92974 986 aaKnown RBP16.59■□□□□ 0.25
SPTLC2-201ENST00000216484 GDPD2Q9HCC8 539 aa16.59■□□□□ 0.25
SPTLC2-201ENST00000216484 EXOC6BQ9Y2D4 811 aa16.59■□□□□ 0.25
SPTLC2-201ENST00000216484 VIMP08670 466 aaKnown RBP16.59■□□□□ 0.25
SPTLC2-201ENST00000216484 ZNF165P49910 485 aa16.59■□□□□ 0.25
SPTLC2-201ENST00000216484 PROCA1Q8NCQ7 364 aaPredicted RBP16.59■□□□□ 0.25
SPTLC2-201ENST00000216484 CCDC89Q8N998 374 aa16.59■□□□□ 0.25
SPTLC2-201ENST00000216484 GOLGA1Q92805 767 aa16.59■□□□□ 0.25
SPTLC2-201ENST00000216484 TFIP11Q9UBB9 837 aaKnown RBP16.58■□□□□ 0.25
SPTLC2-201ENST00000216484 RPGRIP1LQ68CZ1 1315 aa16.58■□□□□ 0.24
SPTLC2-201ENST00000216484 ZNF530Q6P9A1 599 aaPredicted RBP16.58■□□□□ 0.24
SPTLC2-201ENST00000216484 CTAGE1Q96RT6 745 aa16.58■□□□□ 0.24
SPTLC2-201ENST00000216484 IMPG2Q9BZV3 1241 aa16.58■□□□□ 0.24
SPTLC2-201ENST00000216484 STARD3NLO95772 234 aa16.58■□□□□ 0.24
SPTLC2-201ENST00000216484 LMNTD2Q8IXW0 634 aa16.58■□□□□ 0.24
SPTLC2-201ENST00000216484 PRIMPOLQ96LW4 560 aa16.58■□□□□ 0.24
SPTLC2-201ENST00000216484 TSPYL2Q9H2G4 693 aaPredicted RBP16.58■□□□□ 0.24
SPTLC2-201ENST00000216484 CACYBPQ9HB71 228 aaKnown RBP16.58■□□□□ 0.24
SPTLC2-201ENST00000216484 A0A1B0GUA9 196 aa16.57■□□□□ 0.24
SPTLC2-201ENST00000216484 IFIT1P09914 478 aaKnown RBP16.57■□□□□ 0.24
SPTLC2-201ENST00000216484 PNISRQ8TF01 805 aaKnown RBP16.57■□□□□ 0.24
SPTLC2-201ENST00000216484 IFT74Q96LB3 600 aa16.57■□□□□ 0.24
SPTLC2-201ENST00000216484 DDX19AQ9NUU7 478 aaKnown RBP16.57■□□□□ 0.24
SPTLC2-201ENST00000216484 TAF12Q16514 161 aa16.57■□□□□ 0.24
SPTLC2-201ENST00000216484 TLDC2A0PJX2 215 aa16.57■□□□□ 0.24
SPTLC2-201ENST00000216484 GIPC1O14908 333 aa16.57■□□□□ 0.24
SPTLC2-201ENST00000216484 MAP7Q14244 749 aa16.57■□□□□ 0.24
SPTLC2-201ENST00000216484 AFMP43652 599 aa16.57■□□□□ 0.24
SPTLC2-201ENST00000216484 TMEM57Q8N5G2 664 aa16.57■□□□□ 0.24
SPTLC2-201ENST00000216484 KIF1BPQ96EK5 621 aa16.57■□□□□ 0.24
SPTLC2-201ENST00000216484 RMND1Q9NWS8 449 aa16.57■□□□□ 0.24
SPTLC2-201ENST00000216484 DNAI1Q9UI46 699 aa16.57■□□□□ 0.24
SPTLC2-201ENST00000216484 PPP2R5CQ13362 524 aa16.57■□□□□ 0.24
SPTLC2-201ENST00000216484 SLF2Q8IX21 1173 aa16.57■□□□□ 0.24
SPTLC2-201ENST00000216484 TXNDC9O14530 226 aa16.56■□□□□ 0.24
SPTLC2-201ENST00000216484 TMEM132EQ6IEE7 984 aa16.56■□□□□ 0.24
SPTLC2-201ENST00000216484 FHOD3Q2V2M9 1422 aa16.56■□□□□ 0.24
SPTLC2-201ENST00000216484 ANKFY1Q9P2R3 1169 aa16.56■□□□□ 0.24
SPTLC2-201ENST00000216484 RNF41Q9H4P4 317 aaPredicted RBP16.56■□□□□ 0.24
SPTLC2-201ENST00000216484 AGTPBP1Q9UPW5 1226 aa16.56■□□□□ 0.24
SPTLC2-201ENST00000216484 TMEM67Q5HYA8 995 aa16.56■□□□□ 0.24
SPTLC2-201ENST00000216484 BANK1Q8NDB2 785 aa16.56■□□□□ 0.24
SPTLC2-201ENST00000216484 LRRC27Q9C0I9 530 aa16.56■□□□□ 0.24
SPTLC2-201ENST00000216484 E7EVH7 732 aa16.56■□□□□ 0.24
SPTLC2-201ENST00000216484 ZNF830Q96NB3 372 aaPredicted RBP16.56■□□□□ 0.24
SPTLC2-201ENST00000216484 VCXQ9H320 206 aa16.56■□□□□ 0.24
SPTLC2-201ENST00000216484 ATP6V0A2Q9Y487 856 aa16.56■□□□□ 0.24
SPTLC2-201ENST00000216484 GLRX3O76003 335 aaKnown RBP16.55■□□□□ 0.24
SPTLC2-201ENST00000216484 ZNF131P52739 623 aa16.55■□□□□ 0.24
SPTLC2-201ENST00000216484 RPGRQ92834 1020 aaKnown RBP16.55■□□□□ 0.24
SPTLC2-201ENST00000216484 PDCD7Q8N8D1 485 aaKnown RBP16.55■□□□□ 0.24
SPTLC2-201ENST00000216484 NCBP1Q09161 790 aaKnown RBP16.55■□□□□ 0.24
SPTLC2-201ENST00000216484 GJB2P29033 226 aa16.55■□□□□ 0.24
SPTLC2-201ENST00000216484 LMBR1Q8WVP7 490 aa16.55■□□□□ 0.24
SPTLC2-201ENST00000216484 A0A1B0GUL7 405 aa16.54■□□□□ 0.24
SPTLC2-201ENST00000216484 CCDC102BQ68D86 513 aa16.54■□□□□ 0.24
SPTLC2-201ENST00000216484 NBPF11Q86T75 865 aa16.54■□□□□ 0.24
SPTLC2-201ENST00000216484 FMNL3Q8IVF7 1028 aa16.54■□□□□ 0.24
SPTLC2-201ENST00000216484 CCDC7Q96M83 1385 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms