RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 PPP1R42Q7Z4L9 355 aa17.45■□□□□ 0.38
TMEM38A-201ENST00000187762 NUP62CLQ9H1M0 184 aa17.45■□□□□ 0.38
TMEM38A-201ENST00000187762 PXDNLA1KZ92 1463 aa17.45■□□□□ 0.38
TMEM38A-201ENST00000187762 BRMS1Q9HCU9 246 aa17.45■□□□□ 0.38
TMEM38A-201ENST00000187762 PHF8Q9UPP1 1060 aa17.45■□□□□ 0.38
TMEM38A-201ENST00000187762 SOS1Q07889 1333 aaPredicted RBP17.44■□□□□ 0.38
TMEM38A-201ENST00000187762 ZRANB2O95218 330 aaKnown RBP eCLIP17.44■□□□□ 0.38
TMEM38A-201ENST00000187762 GUCY2CP25092 1073 aa17.44■□□□□ 0.38
TMEM38A-201ENST00000187762 CWC15Q9P013 229 aaKnown RBP17.44■□□□□ 0.38
TMEM38A-201ENST00000187762 STAP2Q9UGK3 403 aa17.44■□□□□ 0.38
TMEM38A-201ENST00000187762 SURF6O75683 361 aaKnown RBP17.44■□□□□ 0.38
TMEM38A-201ENST00000187762 CDC25BP30305 580 aa17.44■□□□□ 0.38
TMEM38A-201ENST00000187762 ARID5BQ14865 1188 aa17.44■□□□□ 0.38
TMEM38A-201ENST00000187762 CAMK4Q16566 473 aa17.44■□□□□ 0.38
TMEM38A-201ENST00000187762 SSH3Q8TE77 659 aa17.44■□□□□ 0.38
TMEM38A-201ENST00000187762 TRMT1Q9NXH9 659 aaKnown RBP17.44■□□□□ 0.38
TMEM38A-201ENST00000187762 CHPF2Q9P2E5 772 aa17.44■□□□□ 0.38
TMEM38A-201ENST00000187762 NEMFO60524 1076 aa17.43■□□□□ 0.38
TMEM38A-201ENST00000187762 NBPF7P0C2Y1 421 aaPredicted RBP17.43■□□□□ 0.38
TMEM38A-201ENST00000187762 GPS2Q13227 327 aa17.43■□□□□ 0.38
TMEM38A-201ENST00000187762 SRLQ86TD4 932 aa17.43■□□□□ 0.38
TMEM38A-201ENST00000187762 APPP05067 770 aa17.43■□□□□ 0.38
TMEM38A-201ENST00000187762 SKILP12757 684 aa17.43■□□□□ 0.38
TMEM38A-201ENST00000187762 LRRN4CLQ8ND94 238 aa17.43■□□□□ 0.38
TMEM38A-201ENST00000187762 LRRC59Q96AG4 307 aaKnown RBP17.43■□□□□ 0.38
TMEM38A-201ENST00000187762 L2HGDHQ9H9P8 463 aa17.43■□□□□ 0.38
TMEM38A-201ENST00000187762 MYCNP04198 464 aaPredicted RBP17.42■□□□□ 0.38
TMEM38A-201ENST00000187762 EIF4A1P60842 406 aaKnown RBP17.42■□□□□ 0.38
TMEM38A-201ENST00000187762 BABAM1Q9NWV8 329 aa17.42■□□□□ 0.38
TMEM38A-201ENST00000187762 CEMIPQ8WUJ3 1361 aa17.42■□□□□ 0.38
TMEM38A-201ENST00000187762 CKAP2LQ8IYA6 745 aa17.42■□□□□ 0.38
TMEM38A-201ENST00000187762 CCAR2Q8N163 923 aaKnown RBP17.42■□□□□ 0.38
TMEM38A-201ENST00000187762 IP6K1Q92551 441 aa17.42■□□□□ 0.38
TMEM38A-201ENST00000187762 SRGAP3O43295 1099 aa17.41■□□□□ 0.38
TMEM38A-201ENST00000187762 ARHGAP29Q52LW3 1261 aa17.41■□□□□ 0.38
TMEM38A-201ENST00000187762 AXDND1Q5T1B0 1012 aaPredicted RBP17.41■□□□□ 0.38
TMEM38A-201ENST00000187762 TMCO3Q6UWJ1 677 aa17.41■□□□□ 0.38
TMEM38A-201ENST00000187762 RRP15Q9Y3B9 282 aaKnown RBP17.41■□□□□ 0.38
TMEM38A-201ENST00000187762 KIF2AO00139 706 aaPredicted RBP17.41■□□□□ 0.38
TMEM38A-201ENST00000187762 UBXN6Q9BZV1 441 aa17.41■□□□□ 0.38
TMEM38A-201ENST00000187762 KDM3BQ7LBC6 1761 aa17.41■□□□□ 0.38
TMEM38A-201ENST00000187762 NFAT5O94916 1531 aa17.41■□□□□ 0.38
TMEM38A-201ENST00000187762 PI4KAP2A4QPH2 592 aa17.4■□□□□ 0.38
TMEM38A-201ENST00000187762 LIG1P18858 919 aa17.4■□□□□ 0.38
TMEM38A-201ENST00000187762 GOLGA6L1Q8N7Z2 621 aa17.4■□□□□ 0.38
TMEM38A-201ENST00000187762 PI4KAP1Q8N8J0 262 aa17.4■□□□□ 0.38
TMEM38A-201ENST00000187762 SMC3Q9UQE7 1217 aa17.4■□□□□ 0.38
TMEM38A-201ENST00000187762 CHMP3Q9Y3E7 222 aa17.4■□□□□ 0.38
TMEM38A-201ENST00000187762 MPRIPQ6WCQ1 1025 aa17.4■□□□□ 0.38
TMEM38A-201ENST00000187762 FBXO18Q8NFZ0 1043 aa17.4■□□□□ 0.38
TMEM38A-201ENST00000187762 RHPN1Q8TCX5 695 aa17.4■□□□□ 0.38
TMEM38A-201ENST00000187762 ELP1O95163 1332 aa17.4■□□□□ 0.38
TMEM38A-201ENST00000187762 MED1Q15648 1581 aaPredicted RBP17.4■□□□□ 0.38
TMEM38A-201ENST00000187762 CCZ1BP86790 482 aa17.39■□□□□ 0.37
TMEM38A-201ENST00000187762 CCZ1P86791 482 aaPredicted RBP17.39■□□□□ 0.37
TMEM38A-201ENST00000187762 POLA2Q14181 598 aa17.39■□□□□ 0.37
TMEM38A-201ENST00000187762 FILIP1Q7Z7B0 1213 aa17.39■□□□□ 0.37
TMEM38A-201ENST00000187762 GOLGA5Q8TBA6 731 aa17.39■□□□□ 0.37
TMEM38A-201ENST00000187762 TNMDQ9H2S6 317 aa17.39■□□□□ 0.37
TMEM38A-201ENST00000187762 ARGLU1Q9NWB6 273 aaPredicted RBP17.39■□□□□ 0.37
TMEM38A-201ENST00000187762 JRKLQ9Y4A0 524 aa17.39■□□□□ 0.37
TMEM38A-201ENST00000187762 PRR29P0C7W0 189 aa17.39■□□□□ 0.37
TMEM38A-201ENST00000187762 PI4K2BQ8TCG2 481 aa17.39■□□□□ 0.37
TMEM38A-201ENST00000187762 TOMM22Q9NS69 142 aa17.39■□□□□ 0.37
TMEM38A-201ENST00000187762 OAS2P29728 719 aaKnown RBP17.38■□□□□ 0.37
TMEM38A-201ENST00000187762 CCDC93Q567U6 631 aa17.38■□□□□ 0.37
TMEM38A-201ENST00000187762 ESCO1Q5FWF5 840 aa17.38■□□□□ 0.37
TMEM38A-201ENST00000187762 BEND3Q5T5X7 828 aa17.38■□□□□ 0.37
TMEM38A-201ENST00000187762 ZCCHC17Q9NP64 241 aaKnown RBP17.38■□□□□ 0.37
TMEM38A-201ENST00000187762 KCND1Q9NSA2 647 aa17.38■□□□□ 0.37
TMEM38A-201ENST00000187762 MTMR6Q9Y217 621 aa17.38■□□□□ 0.37
TMEM38A-201ENST00000187762 A0A1B0GUL7 405 aa17.38■□□□□ 0.37
TMEM38A-201ENST00000187762 CCDC69A6NI79 296 aa17.38■□□□□ 0.37
TMEM38A-201ENST00000187762 ZNF165P49910 485 aa17.38■□□□□ 0.37
TMEM38A-201ENST00000187762 DNAAF4Q8WXU2 420 aa17.38■□□□□ 0.37
TMEM38A-201ENST00000187762 CHD2O14647 1828 aaKnown RBP17.38■□□□□ 0.37
TMEM38A-201ENST00000187762 ZNF530Q6P9A1 599 aaPredicted RBP17.37■□□□□ 0.37
TMEM38A-201ENST00000187762 PLEKHG2Q9H7P9 1386 aa17.37■□□□□ 0.37
TMEM38A-201ENST00000187762 BTBD11A6QL63 1104 aa17.37■□□□□ 0.37
TMEM38A-201ENST00000187762 PSME1Q06323 249 aa17.37■□□□□ 0.37
TMEM38A-201ENST00000187762 TSGA10IPQ3SY00 556 aa17.37■□□□□ 0.37
TMEM38A-201ENST00000187762 TTC6Q86TZ1 520 aa17.37■□□□□ 0.37
TMEM38A-201ENST00000187762 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.37■□□□□ 0.37
TMEM38A-201ENST00000187762 AOX1Q06278 1338 aa17.37■□□□□ 0.37
TMEM38A-201ENST00000187762 RAB11FIP3O75154 756 aa17.36■□□□□ 0.37
TMEM38A-201ENST00000187762 TEFQ10587 303 aa17.36■□□□□ 0.37
TMEM38A-201ENST00000187762 DNAJC25Q9H1X3 360 aa17.36■□□□□ 0.37
TMEM38A-201ENST00000187762 ADCY9O60503 1353 aa17.36■□□□□ 0.37
TMEM38A-201ENST00000187762 SNW1Q13573 536 aaKnown RBP17.36■□□□□ 0.37
TMEM38A-201ENST00000187762 REXO1L1PQ8IX06 675 aa17.36■□□□□ 0.37
TMEM38A-201ENST00000187762 MRFAP1L1Q96HT8 127 aa17.36■□□□□ 0.37
TMEM38A-201ENST00000187762 LARP6Q9BRS8 491 aaKnown RBP17.36■□□□□ 0.37
TMEM38A-201ENST00000187762 DACT1Q9NYF0 836 aa17.36■□□□□ 0.37
TMEM38A-201ENST00000187762 ORC3Q9UBD5 711 aaPredicted RBP17.36■□□□□ 0.37
TMEM38A-201ENST00000187762 PXDNQ92626 1479 aa17.36■□□□□ 0.37
TMEM38A-201ENST00000187762 LMO7Q8WWI1 1683 aa17.35■□□□□ 0.37
TMEM38A-201ENST00000187762 ATP8B1O43520 1251 aa17.35■□□□□ 0.37
TMEM38A-201ENST00000187762 SEC31AO94979 1220 aaKnown RBP17.35■□□□□ 0.37
TMEM38A-201ENST00000187762 HSPA4P34932 840 aa17.35■□□□□ 0.37
TMEM38A-201ENST00000187762 TTC31Q49AM3 519 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 829.5 ms