RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 RILPL2Q969X0 211 aa24.06■■□□□ 1.44
TNFRSF1A-201ENST00000162749 GPATCH3Q96I76 525 aa24.06■■□□□ 1.44
TNFRSF1A-201ENST00000162749 CASZ1Q86V15 1759 aa24.06■■□□□ 1.44
TNFRSF1A-201ENST00000162749 UBR3Q6ZT12 1888 aa24.06■■□□□ 1.44
TNFRSF1A-201ENST00000162749 ERC2O15083 957 aa24.06■■□□□ 1.44
TNFRSF1A-201ENST00000162749 PDE8AO60658 829 aa24.06■■□□□ 1.44
TNFRSF1A-201ENST00000162749 TNNI3KQ59H18 835 aa24.06■■□□□ 1.44
TNFRSF1A-201ENST00000162749 CASC1Q6TDU7 716 aa24.06■■□□□ 1.44
TNFRSF1A-201ENST00000162749 UTP14AQ9BVJ6 771 aaKnown RBP24.06■■□□□ 1.44
TNFRSF1A-201ENST00000162749 FPGT-TNNI3KV9GXZ4 949 aa24.06■■□□□ 1.44
TNFRSF1A-201ENST00000162749 IL15P40933 162 aaPredicted RBP24.05■■□□□ 1.44
TNFRSF1A-201ENST00000162749 LRRC24Q50LG9 513 aa24.05■■□□□ 1.44
TNFRSF1A-201ENST00000162749 RTCBQ9Y3I0 505 aaKnown RBP24.05■■□□□ 1.44
TNFRSF1A-201ENST00000162749 FAM177BA6PVY3 158 aa24.04■■□□□ 1.44
TNFRSF1A-201ENST00000162749 RGL2O15211 777 aa24.04■■□□□ 1.44
TNFRSF1A-201ENST00000162749 CIAO1O76071 339 aa24.04■■□□□ 1.44
TNFRSF1A-201ENST00000162749 NTSR2O95665 410 aa24.04■■□□□ 1.44
TNFRSF1A-201ENST00000162749 IFIT5Q13325 482 aaKnown RBP24.04■■□□□ 1.44
TNFRSF1A-201ENST00000162749 GREM2Q9H772 168 aa24.04■■□□□ 1.44
TNFRSF1A-201ENST00000162749 NARFQ9UHQ1 456 aa24.04■■□□□ 1.44
TNFRSF1A-201ENST00000162749 MAP4K4O95819 1239 aaPredicted RBP24.03■■□□□ 1.44
TNFRSF1A-201ENST00000162749 AK7Q96M32 723 aa24.03■■□□□ 1.44
TNFRSF1A-201ENST00000162749 PUS3Q9BZE2 481 aaKnown RBP24.03■■□□□ 1.44
TNFRSF1A-201ENST00000162749 BCL2L12Q9HB09 334 aa24.03■■□□□ 1.44
TNFRSF1A-201ENST00000162749 DAXXQ9UER7 740 aaPredicted RBP24.03■■□□□ 1.44
TNFRSF1A-201ENST00000162749 DBNLQ9UJU6 430 aaKnown RBP24.03■■□□□ 1.44
TNFRSF1A-201ENST00000162749 ITGA6P23229 1130 aa24.02■■□□□ 1.44
TNFRSF1A-201ENST00000162749 RBM25P49756 843 aaKnown RBP24.02■■□□□ 1.44
TNFRSF1A-201ENST00000162749 FBXO3Q9UK99 471 aa24.02■■□□□ 1.44
TNFRSF1A-201ENST00000162749 COL24A1Q17RW2 1714 aa24.02■■□□□ 1.44
TNFRSF1A-201ENST00000162749 USPL1Q5W0Q7 1092 aa24.02■■□□□ 1.44
TNFRSF1A-201ENST00000162749 EIF5BO60841 1220 aaKnown RBP24.01■■□□□ 1.43
TNFRSF1A-201ENST00000162749 HCLS1P14317 486 aaPredicted RBP24.01■■□□□ 1.43
TNFRSF1A-201ENST00000162749 SRP68Q9UHB9 627 aaKnown RBP24.01■■□□□ 1.43
TNFRSF1A-201ENST00000162749 CHMLP26374 656 aa24■■□□□ 1.43
TNFRSF1A-201ENST00000162749 RXRBP28702 533 aa24■■□□□ 1.43
TNFRSF1A-201ENST00000162749 CNTROBQ8N137 903 aa24■■□□□ 1.43
TNFRSF1A-201ENST00000162749 ARHGEF1Q92888 912 aaKnown RBP24■■□□□ 1.43
TNFRSF1A-201ENST00000162749 GPR108Q9NPR9 543 aa24■■□□□ 1.43
TNFRSF1A-201ENST00000162749 TAF7LQ5H9L4 462 aa23.99■■□□□ 1.43
TNFRSF1A-201ENST00000162749 SLC27A3Q5K4L6 730 aa23.99■■□□□ 1.43
TNFRSF1A-201ENST00000162749 ANKRD18BA2A2Z9 1011 aa23.99■■□□□ 1.43
TNFRSF1A-201ENST00000162749 ZPR1O75312 459 aa23.99■■□□□ 1.43
TNFRSF1A-201ENST00000162749 TBC1D9BQ66K14 1250 aa23.99■■□□□ 1.43
TNFRSF1A-201ENST00000162749 ZNF609O15014 1411 aa23.98■■□□□ 1.43
TNFRSF1A-201ENST00000162749 SPEF2Q9C093 1822 aa23.98■■□□□ 1.43
TNFRSF1A-201ENST00000162749 LRP5O75197 1615 aa23.98■■□□□ 1.43
TNFRSF1A-201ENST00000162749 DEKP35659 375 aaKnown RBP23.98■■□□□ 1.43
TNFRSF1A-201ENST00000162749 DBNDD2Q9BQY9 259 aa23.98■■□□□ 1.43
TNFRSF1A-201ENST00000162749 RGS17Q9UGC6 210 aaPredicted RBP23.98■■□□□ 1.43
TNFRSF1A-201ENST00000162749 PHF14O94880 888 aa23.96■■□□□ 1.43
TNFRSF1A-201ENST00000162749 BICDL1Q6ZP65 573 aa23.96■■□□□ 1.43
TNFRSF1A-201ENST00000162749 ESYT1Q9BSJ8 1104 aa23.96■■□□□ 1.43
TNFRSF1A-201ENST00000162749 RIC1Q4ADV7 1423 aa23.96■■□□□ 1.43
TNFRSF1A-201ENST00000162749 TRAPPC3LQ5T215 181 aa23.96■■□□□ 1.43
TNFRSF1A-201ENST00000162749 REC8O95072 547 aa23.95■■□□□ 1.42
TNFRSF1A-201ENST00000162749 HSP90B1P14625 803 aaKnown RBP23.95■■□□□ 1.42
TNFRSF1A-201ENST00000162749 LDHAL6AQ6ZMR3 332 aa23.95■■□□□ 1.42
TNFRSF1A-201ENST00000162749 USP26Q9BXU7 913 aa23.95■■□□□ 1.42
TNFRSF1A-201ENST00000162749 BOLA2Q9H3K6 86 aa23.95■■□□□ 1.42
TNFRSF1A-201ENST00000162749 CEP126Q9P2H0 1117 aa23.95■■□□□ 1.42
TNFRSF1A-201ENST00000162749 RIPOR2Q9Y4F9 1068 aa23.95■■□□□ 1.42
TNFRSF1A-201ENST00000162749 TIMM10P62072 90 aa23.95■■□□□ 1.42
TNFRSF1A-201ENST00000162749 FBXO41Q8TF61 875 aa23.95■■□□□ 1.42
TNFRSF1A-201ENST00000162749 ATP5JP18859 108 aa23.94■■□□□ 1.42
TNFRSF1A-201ENST00000162749 RFC4P35249 363 aa23.94■■□□□ 1.42
TNFRSF1A-201ENST00000162749 PROM2Q8N271 834 aa23.94■■□□□ 1.42
TNFRSF1A-201ENST00000162749 NEUROD6Q96NK8 337 aa23.94■■□□□ 1.42
TNFRSF1A-201ENST00000162749 TAF1P21675 1872 aa23.94■■□□□ 1.42
TNFRSF1A-201ENST00000162749 A0A1B0GUL7 405 aa23.94■■□□□ 1.42
TNFRSF1A-201ENST00000162749 EVI5LQ96CN4 794 aa23.94■■□□□ 1.42
TNFRSF1A-201ENST00000162749 ADRA2BP18089 450 aa23.93■■□□□ 1.42
TNFRSF1A-201ENST00000162749 ERFEQ4G0M1 354 aa23.93■■□□□ 1.42
TNFRSF1A-201ENST00000162749 SETDB2Q96T68 719 aa23.93■■□□□ 1.42
TNFRSF1A-201ENST00000162749 KIF2CQ99661 725 aa23.93■■□□□ 1.42
TNFRSF1A-201ENST00000162749 TXNRD1Q16881 649 aa23.92■■□□□ 1.42
TNFRSF1A-201ENST00000162749 IL25Q9H293 177 aa23.92■■□□□ 1.42
TNFRSF1A-201ENST00000162749 RTL9Q8NET4 1388 aa23.92■■□□□ 1.42
TNFRSF1A-201ENST00000162749 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.92■■□□□ 1.42
TNFRSF1A-201ENST00000162749 CCDC152Q4G0S7 254 aa23.92■■□□□ 1.42
TNFRSF1A-201ENST00000162749 CNNM1Q9NRU3 951 aa23.92■■□□□ 1.42
TNFRSF1A-201ENST00000162749 TNS1Q9HBL0 1735 aaKnown RBP23.92■■□□□ 1.42
TNFRSF1A-201ENST00000162749 POTEAQ6S8J7 498 aa23.91■■□□□ 1.42
TNFRSF1A-201ENST00000162749 SEC31BQ9NQW1 1179 aa23.91■■□□□ 1.42
TNFRSF1A-201ENST00000162749 AKAP2Q9Y2D5 859 aa23.91■■□□□ 1.42
TNFRSF1A-201ENST00000162749 ABCC12Q96J65 1359 aa23.9■■□□□ 1.42
TNFRSF1A-201ENST00000162749 PLSCR1O15162 318 aa23.9■■□□□ 1.42
TNFRSF1A-201ENST00000162749 METTL24Q5JXM2 366 aa23.9■■□□□ 1.42
TNFRSF1A-201ENST00000162749 VGLL2Q8N8G2 317 aa23.9■■□□□ 1.42
TNFRSF1A-201ENST00000162749 NYXQ9GZU5 481 aa23.9■■□□□ 1.42
TNFRSF1A-201ENST00000162749 COL4A1P02462 1669 aa23.89■■□□□ 1.42
TNFRSF1A-201ENST00000162749 NFKBIBQ15653 356 aa23.88■■□□□ 1.41
TNFRSF1A-201ENST00000162749 NBPF5PQ86XG9 351 aaPredicted RBP23.88■■□□□ 1.41
TNFRSF1A-201ENST00000162749 SSFA2P28290 1259 aa23.88■■□□□ 1.41
TNFRSF1A-201ENST00000162749 GTF2E1P29083 439 aaPredicted RBP23.88■■□□□ 1.41
TNFRSF1A-201ENST00000162749 C3orf67Q6ZVT6 689 aa23.88■■□□□ 1.41
TNFRSF1A-201ENST00000162749 SGSM2O43147 1006 aa23.87■■□□□ 1.41
TNFRSF1A-201ENST00000162749 APBA3O96018 575 aa23.87■■□□□ 1.41
TNFRSF1A-201ENST00000162749 SLC10A5Q5PT55 438 aa23.87■■□□□ 1.41
TNFRSF1A-201ENST00000162749 CWC27Q6UX04 472 aaKnown RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms