RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 SEC31BQ9NQW1 1179 aa15.19■□□□□ 0.02
SYPL1-201ENST00000011473 PDZRN3Q9UPQ7 1066 aa15.19■□□□□ 0.02
SYPL1-201ENST00000011473 HOXA10P31260 410 aaPredicted RBP15.19■□□□□ 0.02
SYPL1-201ENST00000011473 SF3B3Q15393 1217 aaKnown RBP15.19■□□□□ 0.02
SYPL1-201ENST00000011473 TTLL11Q8NHH1 800 aa15.19■□□□□ 0.02
SYPL1-201ENST00000011473 CNKSR1Q969H4 720 aa15.19■□□□□ 0.02
SYPL1-201ENST00000011473 RBM17Q96I25 401 aaKnown RBP15.19■□□□□ 0.02
SYPL1-201ENST00000011473 KAZALD1Q96I82 304 aa15.19■□□□□ 0.02
SYPL1-201ENST00000011473 GREM2Q9H772 168 aa15.19■□□□□ 0.02
SYPL1-201ENST00000011473 COL4A1P02462 1669 aa15.18■□□□□ 0.02
SYPL1-201ENST00000011473 DDX46Q7L014 1031 aaKnown RBP15.18■□□□□ 0.02
SYPL1-201ENST00000011473 CELF1Q92879 486 aaKnown RBP15.18■□□□□ 0.02
SYPL1-201ENST00000011473 FOXO4P98177 505 aa15.17■□□□□ 0.02
SYPL1-201ENST00000011473 ITPRIPQ8IWB1 547 aa15.17■□□□□ 0.02
SYPL1-201ENST00000011473 UTYO14607 1347 aa15.17■□□□□ 0.02
SYPL1-201ENST00000011473 ALDH1B1P30837 517 aa15.17■□□□□ 0.02
SYPL1-201ENST00000011473 FAM161AQ3B820 660 aa15.17■□□□□ 0.02
SYPL1-201ENST00000011473 CCDC152Q4G0S7 254 aa15.17■□□□□ 0.02
SYPL1-201ENST00000011473 CHMP3Q9Y3E7 222 aa15.17■□□□□ 0.02
SYPL1-201ENST00000011473 DLEC1Q9Y238 1755 aa15.17■□□□□ 0.02
SYPL1-201ENST00000011473 BRCA1P38398 1863 aaKnown RBP15.17■□□□□ 0.02
SYPL1-201ENST00000011473 LAMB2P55268 1798 aa15.16■□□□□ 0.02
SYPL1-201ENST00000011473 HSP90B1P14625 803 aaKnown RBP15.16■□□□□ 0.02
SYPL1-201ENST00000011473 LMBR1LQ6UX01 489 aa15.16■□□□□ 0.02
SYPL1-201ENST00000011473 PLA2G12BQ9BX93 195 aa15.16■□□□□ 0.02
SYPL1-201ENST00000011473 BICC1Q9H694 974 aaKnown RBP15.16■□□□□ 0.02
SYPL1-201ENST00000011473 UBTFL1P0CB47 393 aaPredicted RBP15.16■□□□□ 0.02
SYPL1-201ENST00000011473 GRAPQ13588 217 aa15.16■□□□□ 0.02
SYPL1-201ENST00000011473 GRAPLQ8TC17 118 aaPredicted RBP15.16■□□□□ 0.02
SYPL1-201ENST00000011473 CRAMP1Q96RY5 1269 aa15.16■□□□□ 0.02
SYPL1-201ENST00000011473 PPEF1O14829 653 aaPredicted RBP15.15■□□□□ 0.02
SYPL1-201ENST00000011473 ARHGAP27Q6ZUM4 889 aa15.15■□□□□ 0.02
SYPL1-201ENST00000011473 COG6Q9Y2V7 657 aa15.15■□□□□ 0.02
SYPL1-201ENST00000011473 SLX4Q8IY92 1834 aa15.14■□□□□ 0.02
SYPL1-201ENST00000011473 DCAF8L1A6NGE4 600 aa15.14■□□□□ 0.01
SYPL1-201ENST00000011473 ITGA6P23229 1130 aa15.14■□□□□ 0.01
SYPL1-201ENST00000011473 C7orf43Q8WVR3 580 aa15.14■□□□□ 0.01
SYPL1-201ENST00000011473 LRRFIP2Q9Y608 721 aaKnown RBP15.14■□□□□ 0.01
SYPL1-201ENST00000011473 CSF1RP07333 972 aa15.14■□□□□ 0.01
SYPL1-201ENST00000011473 TAF1P21675 1872 aa15.13■□□□□ 0.01
SYPL1-201ENST00000011473 CACNA1SQ13698 1873 aa15.13■□□□□ 0.01
SYPL1-201ENST00000011473 RRP1P56182 461 aaKnown RBP15.13■□□□□ 0.01
SYPL1-201ENST00000011473 ANKRD44Q8N8A2 993 aa15.13■□□□□ 0.01
SYPL1-201ENST00000011473 RASSF7Q02833 373 aa15.13■□□□□ 0.01
SYPL1-201ENST00000011473 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.13■□□□□ 0.01
SYPL1-201ENST00000011473 C1orf115Q9H7X2 142 aa15.13■□□□□ 0.01
SYPL1-201ENST00000011473 GRIN3BO60391 1043 aa15.12■□□□□ 0.01
SYPL1-201ENST00000011473 RPS8P62241 208 aaKnown RBP15.12■□□□□ 0.01
SYPL1-201ENST00000011473 ZNF594Q96JF6 807 aaPredicted RBP15.12■□□□□ 0.01
SYPL1-201ENST00000011473 NFKBIEO00221 500 aa15.11■□□□□ 0.01
SYPL1-201ENST00000011473 BBOX1O75936 387 aa15.11■□□□□ 0.01
SYPL1-201ENST00000011473 ZBTB7BO15156 539 aaPredicted RBP15.11■□□□□ 0.01
SYPL1-201ENST00000011473 GNAI3P08754 354 aa15.11■□□□□ 0.01
SYPL1-201ENST00000011473 IFIT5Q13325 482 aaKnown RBP15.11■□□□□ 0.01
SYPL1-201ENST00000011473 MVPQ14764 893 aaKnown RBP15.11■□□□□ 0.01
SYPL1-201ENST00000011473 RABL6Q3YEC7 729 aaPredicted RBP15.11■□□□□ 0.01
SYPL1-201ENST00000011473 ANKRD18AQ8IVF6 992 aa15.11■□□□□ 0.01
SYPL1-201ENST00000011473 KLHDC4Q8TBB5 520 aa15.11■□□□□ 0.01
SYPL1-201ENST00000011473 ATP6V0A2Q9Y487 856 aa15.11■□□□□ 0.01
SYPL1-201ENST00000011473 SUPT16HQ9Y5B9 1047 aaKnown RBP15.11■□□□□ 0.01
SYPL1-201ENST00000011473 ANKRD18BA2A2Z9 1011 aa15.1■□□□□ 0.01
SYPL1-201ENST00000011473 MS4A1P11836 297 aa15.1■□□□□ 0.01
SYPL1-201ENST00000011473 CCDC57Q2TAC2 916 aa15.1■□□□□ 0.01
SYPL1-201ENST00000011473 CCDC93Q567U6 631 aa15.1■□□□□ 0.01
SYPL1-201ENST00000011473 CDC5LQ99459 802 aaKnown RBP15.1■□□□□ 0.01
SYPL1-201ENST00000011473 RTL9Q8NET4 1388 aa15.09■□□□□ 0.01
SYPL1-201ENST00000011473 PRELPP51888 382 aa15.09■□□□□ 0.01
SYPL1-201ENST00000011473 PDE3AQ14432 1141 aa15.09■□□□□ 0.01
SYPL1-201ENST00000011473 GNAI2P04899 355 aa15.08■□□□□ 0.01
SYPL1-201ENST00000011473 NSFL1CQ9UNZ2 370 aaKnown RBP15.08■□□□□ 0.01
SYPL1-201ENST00000011473 WTIPA6NIX2 430 aaPredicted RBP15.08■□□□□ 0
SYPL1-201ENST00000011473 IGHMBP2P38935 993 aaKnown RBP15.08■□□□□ 0
SYPL1-201ENST00000011473 TAF7LQ5H9L4 462 aa15.08■□□□□ 0
SYPL1-201ENST00000011473 SP8Q8IXZ3 490 aa15.08■□□□□ 0
SYPL1-201ENST00000011473 MPHOSPH8Q99549 860 aa15.08■□□□□ 0
SYPL1-201ENST00000011473 SNED1Q8TER0 1413 aa15.07■□□□□ 0
SYPL1-201ENST00000011473 ARFGEF1Q9Y6D6 1849 aa15.07■□□□□ 0
SYPL1-201ENST00000011473 MYH3P11055 1940 aa15.07■□□□□ 0
SYPL1-201ENST00000011473 SOGA3Q5TF21 947 aa15.07■□□□□ 0
SYPL1-201ENST00000011473 TMX4Q9H1E5 349 aaPredicted RBP15.07■□□□□ 0
SYPL1-201ENST00000011473 TAOK3Q9H2K8 898 aa15.07■□□□□ 0
SYPL1-201ENST00000011473 ZNF277Q9NRM2 450 aaPredicted RBP15.07■□□□□ 0
SYPL1-201ENST00000011473 GPSM2P81274 684 aa15.07■□□□□ 0
SYPL1-201ENST00000011473 PUS3Q9BZE2 481 aaKnown RBP15.07■□□□□ 0
SYPL1-201ENST00000011473 BSDC1Q9NW68 430 aaPredicted RBP15.07■□□□□ 0
SYPL1-201ENST00000011473 PNMA6EA0A0J9YXQ4 647 aa15.06■□□□□ 0
SYPL1-201ENST00000011473 DPP8Q6V1X1 898 aaPredicted RBP15.06■□□□□ 0
SYPL1-201ENST00000011473 LDHAL6AQ6ZMR3 332 aa15.06■□□□□ 0
SYPL1-201ENST00000011473 RTKN2Q8IZC4 609 aa15.06■□□□□ 0
SYPL1-201ENST00000011473 GPR101Q96P66 508 aaPredicted RBP15.06■□□□□ 0
SYPL1-201ENST00000011473 ANKIB1Q9P2G1 1089 aa15.06■□□□□ 0
SYPL1-201ENST00000011473 DDX19BQ9UMR2 479 aa15.06■□□□□ 0
SYPL1-201ENST00000011473 MINPP1Q9UNW1 487 aa15.06■□□□□ 0
SYPL1-201ENST00000011473 SRGAP3O43295 1099 aa15.05■□□□□ 0
SYPL1-201ENST00000011473 MPNDQ8N594 471 aa15.05■□□□□ 0
SYPL1-201ENST00000011473 PA2G4Q9UQ80 394 aaKnown RBP15.05■□□□□ 0
SYPL1-201ENST00000011473 SNAP23O00161 211 aa15.05■□□□□ -0
SYPL1-201ENST00000011473 RFX5P48382 616 aaPredicted RBP15.05■□□□□ -0
SYPL1-201ENST00000011473 FKBP4Q02790 459 aaKnown RBP eCLIP15.05■□□□□ -0
SYPL1-201ENST00000011473 LRRC24Q50LG9 513 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms