RNA–Protein interactions for RNA: ENSMUST00000110520.9

Trim9-201, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-201ENSMUST00000110520 Znf653Q6YND2 615 aa11.19□□□□□ -0.62
Trim9-201ENSMUST00000110520 Igbp1bQ9QZ29 343 aa11.19□□□□□ -0.62
Trim9-201ENSMUST00000110520 Eif5P59325 429 aaKnown RBP11.19□□□□□ -0.62
Trim9-201ENSMUST00000110520 Pla2g4fQ50L41 855 aa11.19□□□□□ -0.62
Trim9-201ENSMUST00000110520 DbnlQ62418 436 aa11.19□□□□□ -0.62
Trim9-201ENSMUST00000110520 Cfap69Q8BH53 942 aa11.19□□□□□ -0.62
Trim9-201ENSMUST00000110520 Sugp2Q8CH09 1067 aa11.19□□□□□ -0.62
Trim9-201ENSMUST00000110520 Fam13bQ8K2H3 851 aa11.19□□□□□ -0.62
Trim9-201ENSMUST00000110520 Cdc45Q9Z1X9 566 aa11.19□□□□□ -0.62
Trim9-201ENSMUST00000110520 Pcdh10E9PXQ7 1057 aa11.18□□□□□ -0.62
Trim9-201ENSMUST00000110520 Nop14Q8R3N1 860 aaKnown RBP11.18□□□□□ -0.62
Trim9-201ENSMUST00000110520 Lrrc2Q8VDB8 371 aa11.18□□□□□ -0.62
Trim9-201ENSMUST00000110520 Kiaa0556Q8C753 1610 aa11.18□□□□□ -0.62
Trim9-201ENSMUST00000110520 LyarQ08288 388 aaKnown RBP11.18□□□□□ -0.62
Trim9-201ENSMUST00000110520 Kcna6Q61923 529 aa11.18□□□□□ -0.62
Trim9-201ENSMUST00000110520 Zkscan8Q8BSL0 588 aa11.18□□□□□ -0.62
Trim9-201ENSMUST00000110520 Cnot6lQ8VEG6 555 aa11.18□□□□□ -0.62
Trim9-201ENSMUST00000110520 Ncoa5Q91W39 579 aaKnown RBP11.18□□□□□ -0.62
Trim9-201ENSMUST00000110520 Mrpl44Q9CY73 333 aaKnown RBP11.18□□□□□ -0.62
Trim9-201ENSMUST00000110520 Hmg20bQ9Z104 317 aa11.18□□□□□ -0.62
Trim9-201ENSMUST00000110520 Col1a2Q01149 1372 aa11.18□□□□□ -0.62
Trim9-201ENSMUST00000110520 TnksQ6PFX9 1320 aa11.18□□□□□ -0.62
Trim9-201ENSMUST00000110520 Igsf1Q7TQA1 1317 aa11.18□□□□□ -0.62
Trim9-201ENSMUST00000110520 Dnm1P39053 867 aa11.18□□□□□ -0.62
Trim9-201ENSMUST00000110520 Ehmt1Q5DW34 1296 aa11.18□□□□□ -0.62
Trim9-201ENSMUST00000110520 TrhQ62361 256 aa11.18□□□□□ -0.62
Trim9-201ENSMUST00000110520 Rapgef3Q8VCC8 918 aa11.18□□□□□ -0.62
Trim9-201ENSMUST00000110520 Dctn1O08788 1281 aa11.17□□□□□ -0.62
Trim9-201ENSMUST00000110520 Ccdc82Q6PG04 518 aa11.17□□□□□ -0.62
Trim9-201ENSMUST00000110520 Me3Q8BMF3 604 aa11.17□□□□□ -0.62
Trim9-201ENSMUST00000110520 Rps6kb1Q8BSK8 525 aa11.17□□□□□ -0.62
Trim9-201ENSMUST00000110520 Atp1a3Q6PIC6 1013 aa11.17□□□□□ -0.62
Trim9-201ENSMUST00000110520 Ppp1r37Q8BKR5 712 aa11.17□□□□□ -0.62
Trim9-201ENSMUST00000110520 Mrpl50Q8VDT9 159 aaKnown RBP11.17□□□□□ -0.62
Trim9-201ENSMUST00000110520 CpvlQ9D3S9 478 aa11.17□□□□□ -0.62
Trim9-201ENSMUST00000110520 Tubgcp6G5E8P0 1769 aa11.17□□□□□ -0.62
Trim9-201ENSMUST00000110520 Eya2O08575 532 aa11.17□□□□□ -0.62
Trim9-201ENSMUST00000110520 Ccar2Q8VDP4 922 aaKnown RBP11.17□□□□□ -0.62
Trim9-201ENSMUST00000110520 Zscan29E9Q5B4 869 aa11.17□□□□□ -0.62
Trim9-201ENSMUST00000110520 Casp1P29452 402 aa11.17□□□□□ -0.62
Trim9-201ENSMUST00000110520 Hvcn1Q3U2S8 269 aa11.17□□□□□ -0.62
Trim9-201ENSMUST00000110520 Kiaa0753Q6A000 959 aa11.17□□□□□ -0.62
Trim9-201ENSMUST00000110520 Ppp1r10Q80W00 888 aaKnown RBP11.17□□□□□ -0.62
Trim9-201ENSMUST00000110520 Nup133Q8R0G9 1155 aa11.17□□□□□ -0.62
Trim9-201ENSMUST00000110520 Zeb2Q9R0G7 1215 aa11.17□□□□□ -0.62
Trim9-201ENSMUST00000110520 Tecpr2Q3UH45 1423 aa11.16□□□□□ -0.62
Trim9-201ENSMUST00000110520 Nrxn1Q9CS84 1514 aa11.16□□□□□ -0.62
Trim9-201ENSMUST00000110520 Prl7d1P04769 244 aa11.16□□□□□ -0.62
Trim9-201ENSMUST00000110520 Kif3aP28741 701 aa11.16□□□□□ -0.62
Trim9-201ENSMUST00000110520 Tpm2P58774 284 aa11.16□□□□□ -0.62
Trim9-201ENSMUST00000110520 Zdhhc9P59268 364 aa11.16□□□□□ -0.62
Trim9-201ENSMUST00000110520 Tmem266Q8BZB3 538 aa11.16□□□□□ -0.62
Trim9-201ENSMUST00000110520 Srgap1Q91Z69 1062 aa11.16□□□□□ -0.62
Trim9-201ENSMUST00000110520 Ncapd2Q8K2Z4 1392 aa11.16□□□□□ -0.62
Trim9-201ENSMUST00000110520 Cops6O88545 324 aa11.16□□□□□ -0.62
Trim9-201ENSMUST00000110520 Tmem143Q8VD26 458 aa11.16□□□□□ -0.62
Trim9-201ENSMUST00000110520 CltcQ68FD5 1675 aaKnown RBP11.16□□□□□ -0.62
Trim9-201ENSMUST00000110520 Tyro3P55144 880 aa11.16□□□□□ -0.62
Trim9-201ENSMUST00000110520 NsmfQ99NF2 532 aa11.16□□□□□ -0.62
Trim9-201ENSMUST00000110520 Cap2Q9CYT6 476 aa11.16□□□□□ -0.62
Trim9-201ENSMUST00000110520 Pik3ap1Q9EQ32 811 aa11.16□□□□□ -0.62
Trim9-201ENSMUST00000110520 Cdk12Q14AX6 1484 aaKnown RBP11.16□□□□□ -0.62
Trim9-201ENSMUST00000110520 Mybbp1aQ7TPV4 1344 aaKnown RBP11.16□□□□□ -0.62
Trim9-201ENSMUST00000110520 Kdm6aO70546 1401 aa11.15□□□□□ -0.62
Trim9-201ENSMUST00000110520 Zscan25B2RX31 543 aa11.15□□□□□ -0.62
Trim9-201ENSMUST00000110520 Elmsan1E9Q2I4 1089 aaKnown RBP11.15□□□□□ -0.62
Trim9-201ENSMUST00000110520 Ano8Q6PB70 1060 aa11.15□□□□□ -0.62
Trim9-201ENSMUST00000110520 Sgsm2Q80U12 1005 aa11.15□□□□□ -0.62
Trim9-201ENSMUST00000110520 Cnpy2Q9QXT0 182 aa11.15□□□□□ -0.62
Trim9-201ENSMUST00000110520 FanccP50652 591 aa11.15□□□□□ -0.62
Trim9-201ENSMUST00000110520 HellsQ60848 821 aa11.15□□□□□ -0.62
Trim9-201ENSMUST00000110520 Ano6Q6P9J9 911 aa11.15□□□□□ -0.62
Trim9-201ENSMUST00000110520 Fnbp4Q6ZQ03 1031 aa11.15□□□□□ -0.62
Trim9-201ENSMUST00000110520 Abca8aQ8K442 1620 aa11.15□□□□□ -0.62
Trim9-201ENSMUST00000110520 Myl3P09542 204 aa11.15□□□□□ -0.63
Trim9-201ENSMUST00000110520 NpeppsQ11011 920 aa11.15□□□□□ -0.63
Trim9-201ENSMUST00000110520 Metap2O08663 478 aaKnown RBP11.14□□□□□ -0.63
Trim9-201ENSMUST00000110520 CtcfQ61164 736 aaKnown RBP11.14□□□□□ -0.63
Trim9-201ENSMUST00000110520 Ppp4r3aQ6P2K6 820 aa11.14□□□□□ -0.63
Trim9-201ENSMUST00000110520 Vps16Q920Q4 839 aa11.14□□□□□ -0.63
Trim9-201ENSMUST00000110520 Stxbp4Q9WV89 557 aa11.14□□□□□ -0.63
Trim9-201ENSMUST00000110520 Gemin5Q8BX17 1502 aaKnown RBP11.14□□□□□ -0.63
Trim9-201ENSMUST00000110520 Cdk5rap2Q8K389 1822 aa11.14□□□□□ -0.63
Trim9-201ENSMUST00000110520 Acnat2Q8BGG9 420 aa11.14□□□□□ -0.63
Trim9-201ENSMUST00000110520 Iqca1Q9CUL5 857 aa11.14□□□□□ -0.63
Trim9-201ENSMUST00000110520 Zbtb43Q9DAI4 467 aa11.14□□□□□ -0.63
Trim9-201ENSMUST00000110520 Zscan20B2KFW1 1030 aa11.14□□□□□ -0.63
Trim9-201ENSMUST00000110520 Wdr93Q402B2 695 aa11.14□□□□□ -0.63
Trim9-201ENSMUST00000110520 Tmx1Q8VBT0 278 aa11.14□□□□□ -0.63
Trim9-201ENSMUST00000110520 Plekho1Q9JIY0 408 aa11.14□□□□□ -0.63
Trim9-201ENSMUST00000110520 Abca17E9PX95 1733 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 NcapgE9PWG6 1004 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Hap1O35668 628 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Cdkn1cP49919 348 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Gm12185Q5NCB2 835 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Slu7Q8BHJ9 585 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Riok1Q922Q2 567 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Ccdc39Q9D5Y1 937 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Topbp1Q6ZQF0 1515 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Dnai2A2AC93 623 aa11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 110.5 ms