RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 FIBINQ8TAL6 211 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 PAWRQ96IZ0 340 aaKnown RBP12.69□□□□□ -0.38
SCARB2-227ENST00000640957 PINK1Q9BXM7 581 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 ISYNA1Q9NPH2 558 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 LHX9Q9NQ69 397 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 NIT2Q9NQR4 276 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 CAMK2AQ9UQM7 478 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 HIDE1A8MVS5 230 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 F5H5P2 479 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 EIF3GO75821 320 aaKnown RBP eCLIP12.69□□□□□ -0.38
SCARB2-227ENST00000640957 ECDO95905 644 aaPredicted RBP12.69□□□□□ -0.38
SCARB2-227ENST00000640957 C6P13671 934 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 BSGP35613 385 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 IFNGR2P38484 337 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 CCR2P41597 374 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 RAP2BP61225 183 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 MAT1AQ00266 395 aaKnown RBP12.69□□□□□ -0.38
SCARB2-227ENST00000640957 MAMSTRQ6ZN01 415 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 ZNF546Q86UE3 836 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 DIO2Q92813 273 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 ELP4Q96EB1 424 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 IL21Q9HBE4 155 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 C14orf105Q9NVL8 296 aa12.69□□□□□ -0.38
SCARB2-227ENST00000640957 OR6C76A6NM76 312 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 HPP00738 406 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 F3P13726 295 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 IFNGR1P15260 489 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 C4BPBP20851 252 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 PPM1FP49593 454 aaPredicted RBP12.68□□□□□ -0.38
SCARB2-227ENST00000640957 RAB13P51153 203 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 CSRP2Q16527 193 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 SLC25A30Q5SVS4 291 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 TMEM71Q6P5X7 295 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 IKBIPQ70UQ0 350 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 SLC22A8Q8TCC7 542 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 PAQR8Q8TEZ7 354 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 OVCA2Q8WZ82 227 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 GLYATL1Q969I3 302 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 BCL2L14Q9BZR8 327 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 FBXO34Q9NWN3 711 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 KLHL9Q9P2J3 617 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 CTSFQ9UBX1 484 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 FAM96BQ9Y3D0 163 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 NPTNQ9Y639 398 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 TMEM272A0A1B0GTI8 110 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 SLC5A10A0PJK1 596 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 UBE2QL1A1L167 161 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 TXNL1O43396 289 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 SERPINA3P01011 423 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 P2RX1P51575 399 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 RAB12Q6IQ22 244 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 OR2A12Q8NGT7 310 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 THAP6Q8TBB0 222 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 ZNRF4Q8WWF5 429 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 ULBP3Q9BZM4 244 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 DNTTIP1Q9H147 329 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 IL20Q9NYY1 176 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 EXOGQ9Y2C4 368 aaKnown RBP12.68□□□□□ -0.38
SCARB2-227ENST00000640957 TRIOO75962 3097 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 FKTNO75072 461 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 SLC25A12O75746 678 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 POP7O75817 140 aaKnown RBP12.68□□□□□ -0.38
SCARB2-227ENST00000640957 NFATC1O95644 943 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 CRYBA1P05813 215 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 GIPP09681 153 aaPredicted RBP12.68□□□□□ -0.38
SCARB2-227ENST00000640957 ITPKBP27987 946 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 RAB33AQ14088 237 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 ZNF793Q6ZN11 406 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 FAM98AQ8NCA5 519 aaKnown RBP12.68□□□□□ -0.38
SCARB2-227ENST00000640957 OR52L1Q8NGH7 329 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 PDCD10Q9BUL8 212 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 SLC38A1Q9H2H9 487 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 NEUROD4Q9HD90 331 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 PURGQ9UJV8 347 aaKnown RBP12.68□□□□□ -0.38
SCARB2-227ENST00000640957 PLEKHA6Q9Y2H5 1048 aa12.68□□□□□ -0.38
SCARB2-227ENST00000640957 SERTM1A2A2V5 107 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 OR2M5A3KFT3 312 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 MAN2B1O00754 1011 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 PRAMEF2O60811 474 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 PCDH8O95206 1070 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 SBK2P0C263 348 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 PCBP4P57723 403 aaKnown RBP12.67□□□□□ -0.38
SCARB2-227ENST00000640957 BLOC1S1P78537 153 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 FOXK2Q01167 660 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 GRASPQ7Z6J2 395 aaPredicted RBP12.67□□□□□ -0.38
SCARB2-227ENST00000640957 C17orf64Q86WR6 236 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 OR52E2Q8NGJ4 325 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 KISS1RQ969F8 398 aaPredicted RBP12.67□□□□□ -0.38
SCARB2-227ENST00000640957 CNRIP1Q96F85 164 aaPredicted RBP12.67□□□□□ -0.38
SCARB2-227ENST00000640957 OR7D2Q96RA2 312 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 EXO5Q9H790 373 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 TREM1Q9NP99 234 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 SIDT1Q9NXL6 827 aaKnown RBP12.67□□□□□ -0.38
SCARB2-227ENST00000640957 COA4Q9NYJ1 87 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 FARSAQ9Y285 508 aaKnown RBP12.67□□□□□ -0.38
SCARB2-227ENST00000640957 A0A1B0GUH1 482 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 M0QYG6 137 aa12.67□□□□□ -0.38
SCARB2-227ENST00000640957 FOXE1O00358 373 aaPredicted RBP12.67□□□□□ -0.38
SCARB2-227ENST00000640957 ERI3O43414 337 aaKnown RBP12.67□□□□□ -0.38
SCARB2-227ENST00000640957 STX11O75558 287 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms