RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 PDE10AQ9Y233 779 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 PYGO1Q9Y3Y4 419 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 MAD1L1Q9Y6D9 718 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 CACNA1DQ01668 2161 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 NCOA6Q14686 2063 aaPredicted RBP3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 DNAJC13O75165 2243 aa3.15□□□□□ -1.91
CKS1BP3-201ENST00000600888 CENPEQ02224 2701 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 FREM3P0C091 2139 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 CACNA1CQ13936 2221 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 IGHV4-4A0A075B6R2 117 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 MEIOCA2RUB1 952 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 KRT87PA6NCN2 255 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 H0YGG7 62 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 H0YIG0 161 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 TTI1O43156 1089 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 NSA2O95478 260 aaKnown RBP3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 HPP00738 406 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 IGHV2-70P01814 119 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 C1QAP02745 245 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 RAF1P04049 648 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 ALPPP05187 535 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 GSTA2P09210 222 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 HIST1H2AGP0C0S8 130 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 SMIM18P0DKX4 95 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 IL10P22301 178 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 OTX2P32243 289 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 RAD52P43351 418 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 NKX2-1P43699 371 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 RPL21P46778 160 aaKnown RBP3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 VEGFCP49767 419 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 CDKN2DP55273 166 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 KRTAP10-7P60409 375 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 HERV-K104P61576 105 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 RPS15AP62244 130 aaKnown RBP3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 TBPL1P62380 186 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 CSNK1G2P78368 415 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 MAT1AQ00266 395 aaKnown RBP3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 CAV1Q03135 178 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 KLC1Q07866 573 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 CUL1Q13616 776 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 SNTB1Q13884 538 aaKnown RBP3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 NDUFA9Q16795 377 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 PPP1R3AQ16821 1122 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 KCTD19Q17RG1 926 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 KLHL26Q53HC5 615 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 CDKL4Q5MAI5 379 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 ELFN2Q5R3F8 820 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 C1orf189Q5VU69 101 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 DUPD1Q68J44 220 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 CAPN13Q6MZZ7 669 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 NIPAL1Q6NVV3 410 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 RPUSD3Q6P087 351 aaKnown RBP3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 AGTRAPQ6RW13 159 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 TMEM205Q6UW68 189 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 C16orf54Q6UWD8 224 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 SUSD1Q6UWL2 747 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 SBSNQ6UWP8 590 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 Q6ZS92 163 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 VN1R4Q7Z5H5 301 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 C17orf64Q86WR6 236 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 NUDT13Q86X67 352 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 KLHDC8AQ8IYD2 350 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 EID3Q8N140 333 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 C2orf73Q8N5S3 287 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 AMER3Q8N944 861 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 GPATCH11Q8N954 259 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 POMGNT2Q8NAT1 580 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 POGLUT1Q8NBL1 392 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 CLEC1AQ8NC01 280 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 CAMKVQ8NCB2 501 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 FBXO36Q8NEA4 188 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 SPATA4Q8NEY3 305 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 OR11G2Q8NGC1 345 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 OR2T11Q8NH01 316 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 MRGPRDQ8TDS7 321 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 EEF1AKMT1Q8WVE0 214 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 ATL1Q8WXF7 558 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 RERGQ96A58 199 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 C10orf90Q96M02 699 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 SEPHS2Q99611 448 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 ERP44Q9BS26 406 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 ACAT2Q9BWD1 397 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 DRC3Q9H069 523 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 WDR13Q9H1Z4 485 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 RHOJQ9H4E5 214 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 NOL11Q9H8H0 719 aaKnown RBP3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 ANKZF1Q9H8Y5 726 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 CCDC177Q9NQR7 707 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 ATAD3AQ9NVI7 634 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 ZNF282Q9UDV7 671 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 CIDEBQ9UHD4 219 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 PYCARDQ9ULZ3 195 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 CHMP2BQ9UQN3 213 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 SLC22A7Q9Y694 548 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 UTP20O75691 2785 aaKnown RBP3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 EXPH5Q8NEV8 1989 aa3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 PHF3Q92576 2039 aaKnown RBP3.14□□□□□ -1.91
CKS1BP3-201ENST00000600888 COL12A1Q99715 3063 aa3.13□□□□□ -1.91
CKS1BP3-201ENST00000600888 ARHGAP21Q5T5U3 1957 aa3.13□□□□□ -1.91
CKS1BP3-201ENST00000600888 ITPR2Q14571 2701 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 257.4 ms