RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 LRR1Q96L50 414 aa16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 COPS4Q9BT78 406 aa16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 LHPPQ9H008 270 aa16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 PTGES2Q9H7Z7 377 aa16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 AMBNQ9NP70 447 aa16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 STMN3Q9NZ72 180 aa16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 CNOT2Q9NZN8 540 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 DNAJC27Q9NZQ0 273 aa16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 RPL36Q9Y3U8 105 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 PCDHGB1Q9Y5G3 927 aa16.01■□□□□ 0.15
SHKBP1-224ENST00000600718 SNX4O95219 450 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 PCSK6P29122 969 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 PRPS1P60891 318 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 CAMK2BQ13554 666 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 SYT14P1Q58G82 188 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 AHSA2Q719I0 299 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 PLCZ1Q86YW0 608 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 CROCCP3Q8IVE0 287 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 MRGPRX4Q96LA9 322 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 FKRPQ9H9S5 495 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 PROK2Q9HC23 129 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 TBCCD1Q9NVR7 557 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 RHBDL2Q9NX52 303 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 RSL24D1Q9UHA3 163 aaKnown RBP16■□□□□ 0.15
SHKBP1-224ENST00000600718 ZNF229Q9UJW7 825 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 HRH3Q9Y5N1 445 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 PTPRBP23467 1997 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 MUC6Q6W4X9 2439 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 SNTNA6NMZ2 147 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 NPIPB7O75200 414 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 RPS4XP62701 263 aaKnown RBP16■□□□□ 0.15
SHKBP1-224ENST00000600718 LTBQ06643 244 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 TMEM44Q2T9K0 475 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 PLPPR5Q32ZL2 321 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 BEST3Q8N1M1 668 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 SVOPQ8N4V2 548 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 CLEC1AQ8NC01 280 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 ZNF582Q96NG8 517 aaPredicted RBP16■□□□□ 0.15
SHKBP1-224ENST00000600718 SIGLEC11Q96RL6 698 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 RHNO1Q9BSD3 238 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 ABI3Q9P2A4 366 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 VDAC3Q9Y277 283 aa16■□□□□ 0.15
SHKBP1-224ENST00000600718 WISP1O95388 367 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 MT-ATP6P00846 226 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 P04436 131 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 HIST1H2ABP04908 130 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 CDK1P06493 297 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 ASAH2BP0C7U1 165 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 PIPP12273 146 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 PEPDP12955 493 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 ITGA3P26006 1051 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 SLC15A1P46059 708 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 RPS5P46782 204 aaKnown RBP15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 CYB561P49447 251 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 FOXK2Q01167 660 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 INPP5JQ15735 1006 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 ABHD17BQ5VST6 288 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 DPY19L2P2Q6ZN68 376 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 HIST3H2AQ7L7L0 130 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 ZNF554Q86TJ5 538 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 OR6S1Q8NH40 331 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 HIST1H2ACQ93077 130 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 C1GALT1C1Q96EU7 318 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 MOGAT1Q96PD6 335 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 FN3KQ9H479 309 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 GPR83Q9NYM4 423 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 CHRNA9Q9UGM1 479 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 FBXL2Q9UKC9 423 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 HIF3AQ9Y2N7 669 aa15.99■□□□□ 0.15
SHKBP1-224ENST00000600718 A0A087WZY1 265 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 KDM4EB2RXH2 506 aaPredicted RBP15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 H3BSA7 217 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 SNPHO15079 494 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 ZNF208O43345 1280 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 BGLAPP02818 100 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 MLLT10P55197 1068 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 C1orf140Q5VVS0 124 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 STX19Q8N4C7 294 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 ANKK1Q8NFD2 765 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 THAP4Q8WY91 577 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 TMEM41AQ96HV5 264 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 TUBA1CQ9BQE3 449 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 NDEL1Q9GZM8 345 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 CMC2Q9NRP2 79 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 SACM1LQ9NTJ5 587 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 GPR52Q9Y2T5 361 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 hCG_2014768A0A024R1R8 64 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 ZC3H12DA2A288 527 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 PRODHO43272 600 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 OR2T1O43869 369 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 GFRA3O60609 400 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 PPP1R3DO95685 299 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 MT-ND2P03891 347 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 HK1P19367 917 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 PCMT1P22061 227 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 EIF1P41567 113 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 MASP1P48740 699 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 EMX1Q04741 257 aaPredicted RBP15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 ST3GAL4Q11206 333 aa15.98■□□□□ 0.15
SHKBP1-224ENST00000600718 FOXF1Q12946 379 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms