RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 FAM47E-STBD1D6RA91 191 aa18.81■□□□□ 0.6
PNKP-203ENST00000593946 WDPCPO95876 746 aa18.81■□□□□ 0.6
PNKP-203ENST00000593946 F10P00742 488 aa18.81■□□□□ 0.6
PNKP-203ENST00000593946 BGLAPP02818 100 aa18.81■□□□□ 0.6
PNKP-203ENST00000593946 DNASE1L1P49184 302 aa18.81■□□□□ 0.6
PNKP-203ENST00000593946 MAP2K6P52564 334 aa18.81■□□□□ 0.6
PNKP-203ENST00000593946 CSNK2BP67870 215 aa18.81■□□□□ 0.6
PNKP-203ENST00000593946 SNAPC1Q16533 368 aa18.81■□□□□ 0.6
PNKP-203ENST00000593946 AGAP7PQ5VUJ5 663 aa18.81■□□□□ 0.6
PNKP-203ENST00000593946 C1orf140Q5VVS0 124 aa18.81■□□□□ 0.6
PNKP-203ENST00000593946 SPINK14Q6IE38 97 aa18.81■□□□□ 0.6
PNKP-203ENST00000593946 LINC00696Q6ZRV3 163 aa18.81■□□□□ 0.6
PNKP-203ENST00000593946 LNX2Q8N448 690 aa18.81■□□□□ 0.6
PNKP-203ENST00000593946 AGAP4Q96P64 663 aa18.81■□□□□ 0.6
PNKP-203ENST00000593946 SIGLEC12Q96PQ1 595 aa18.81■□□□□ 0.6
PNKP-203ENST00000593946 SLC38A2Q96QD8 506 aa18.81■□□□□ 0.6
PNKP-203ENST00000593946 TEX12Q9BXU0 123 aa18.81■□□□□ 0.6
PNKP-203ENST00000593946 PLCXD1Q9NUJ7 323 aa18.81■□□□□ 0.6
PNKP-203ENST00000593946 GPR83Q9NYM4 423 aa18.81■□□□□ 0.6
PNKP-203ENST00000593946 PIEZO1Q92508 2521 aa18.81■□□□□ 0.6
PNKP-203ENST00000593946 MED12Q93074 2177 aa18.81■□□□□ 0.6
PNKP-203ENST00000593946 CFAP47Q6ZTR5 3102 aa18.81■□□□□ 0.6
PNKP-203ENST00000593946 CEP295Q9C0D2 2601 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 LOC400499M0QZD8 3231 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 SHISA8B8ZZ34 492 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 SURF4O15260 269 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 ZNF208O43345 1280 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 NDUFB2O95178 105 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 ATP6V1B1P15313 513 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 ADH6P28332 368 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 DSCR4P56555 118 aaPredicted RBP18.8■□□□□ 0.6
PNKP-203ENST00000593946 SLC25A30Q5SVS4 291 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 FAM26EQ8N5C1 309 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 C10orf53Q8N6V4 93 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 ZBTB8AQ96BR9 441 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 OR11A1Q9GZK7 315 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 DEPPQ9NTK1 212 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 PAK1IP1Q9NWT1 392 aaPredicted RBP18.8■□□□□ 0.6
PNKP-203ENST00000593946 TUBA8Q9NY65 449 aaPredicted RBP18.8■□□□□ 0.6
PNKP-203ENST00000593946 ZNF229Q9UJW7 825 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 HIF3AQ9Y2N7 669 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 A0A087WXM4 84 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 SH3D21A4FU49 640 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 A6NL46 340 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 EFNA2O43921 213 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 CBR3O75828 277 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 CLPTM1O96005 669 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 MT-ATP6P00846 226 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 HMGN1P05114 100 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 TSPAN19P0C672 248 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 DPP4P27487 766 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 SLC6A6P31641 620 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 GRK5P34947 590 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 EIF1P41567 113 aaKnown RBP18.8■□□□□ 0.6
PNKP-203ENST00000593946 TUBA4AP68366 448 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 ANKDD1AQ495B1 522 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 FAM69AQ5T7M9 428 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 TMEM163Q8TC26 289 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 KCNE4Q8WWG9 221 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 SGCDQ92629 289 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 JSRP1Q96MG2 331 aaPredicted RBP18.8■□□□□ 0.6
PNKP-203ENST00000593946 IFT27Q9BW83 186 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 DUSP21Q9H596 190 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 CLN6Q9NWW5 311 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 SCN3BQ9NY72 215 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 TPRKBQ9Y3C4 175 aa18.8■□□□□ 0.6
PNKP-203ENST00000593946 TLX2O43763 284 aaPredicted RBP18.79■□□□□ 0.6
PNKP-203ENST00000593946 FAM20BO75063 409 aa18.79■□□□□ 0.6
PNKP-203ENST00000593946 CNR1P21554 472 aa18.79■□□□□ 0.6
PNKP-203ENST00000593946 EEF1B2P24534 225 aaKnown RBP18.79■□□□□ 0.6
PNKP-203ENST00000593946 UQCRC1P31930 480 aa18.79■□□□□ 0.6
PNKP-203ENST00000593946 PRPS1P60891 318 aa18.79■□□□□ 0.6
PNKP-203ENST00000593946 SLC35A2P78381 396 aa18.79■□□□□ 0.6
PNKP-203ENST00000593946 OR1C1Q15619 314 aa18.79■□□□□ 0.6
PNKP-203ENST00000593946 OCLNQ16625 522 aa18.79■□□□□ 0.6
PNKP-203ENST00000593946 GXYLT1Q4G148 440 aa18.79■□□□□ 0.6
PNKP-203ENST00000593946 OR6S1Q8NH40 331 aa18.79■□□□□ 0.6
PNKP-203ENST00000593946 BATF3Q9NR55 127 aa18.79■□□□□ 0.6
PNKP-203ENST00000593946 PLA2G3Q9NZ20 509 aa18.79■□□□□ 0.6
PNKP-203ENST00000593946 BAIAP2Q9UQB8 552 aa18.79■□□□□ 0.6
PNKP-203ENST00000593946 LRRC3CA6NJW4 275 aa18.78■□□□□ 0.6
PNKP-203ENST00000593946 EFSO43281 561 aa18.78■□□□□ 0.6
PNKP-203ENST00000593946 TLX3O43711 291 aaPredicted RBP18.78■□□□□ 0.6
PNKP-203ENST00000593946 AHSA1O95433 338 aa18.78■□□□□ 0.6
PNKP-203ENST00000593946 HTR1AP08908 422 aa18.78■□□□□ 0.6
PNKP-203ENST00000593946 IL11P20809 199 aa18.78■□□□□ 0.6
PNKP-203ENST00000593946 FOXK1P85037 733 aa18.78■□□□□ 0.6
PNKP-203ENST00000593946 MFAP5Q13361 173 aa18.78■□□□□ 0.6
PNKP-203ENST00000593946 ZNF773Q6PK81 442 aa18.78■□□□□ 0.6
PNKP-203ENST00000593946 GTPBP8Q8N3Z3 284 aaPredicted RBP18.78■□□□□ 0.6
PNKP-203ENST00000593946 ZNF248Q8NDW4 579 aa18.78■□□□□ 0.6
PNKP-203ENST00000593946 DDIT4LQ96D03 193 aa18.78■□□□□ 0.6
PNKP-203ENST00000593946 Q96MT0 163 aa18.78■□□□□ 0.6
PNKP-203ENST00000593946 GPX7Q96SL4 187 aaPredicted RBP18.78■□□□□ 0.6
PNKP-203ENST00000593946 RHNO1Q9BSD3 238 aa18.78■□□□□ 0.6
PNKP-203ENST00000593946 RNF32Q9H0A6 362 aa18.78■□□□□ 0.6
PNKP-203ENST00000593946 ZNF552Q9H707 407 aaPredicted RBP18.78■□□□□ 0.6
PNKP-203ENST00000593946 APC2O95996 2303 aa18.78■□□□□ 0.6
PNKP-203ENST00000593946 MCIDASD6RGH6 385 aa18.77■□□□□ 0.6
PNKP-203ENST00000593946 PTGES3LE9PB15 166 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms