RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 HMGN4O00479 90 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 SCN2BO60939 215 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 KRT33AO76009 404 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 AKR7A3O95154 331 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 AGR2O95994 175 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 F12P00748 615 aaPredicted RBP5.61□□□□□ -1.51
SDF2-205ENST00000587629 GSNP06396 782 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 CHRM4P08173 479 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 GKN3PP0CG01 181 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 BMP4P12644 408 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 SLC25A16P16260 332 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 IL7RP16871 459 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 USF1P22415 310 aaPredicted RBP5.61□□□□□ -1.51
SDF2-205ENST00000587629 APOBEC3AP31941 199 aaPredicted RBP5.61□□□□□ -1.51
SDF2-205ENST00000587629 S100A3P33764 101 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 SERPINB5P36952 375 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 KHKP50053 298 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 POLR2HP52434 150 aaKnown RBP5.61□□□□□ -1.51
SDF2-205ENST00000587629 EFNA4P52798 201 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 SLC16A1P53985 500 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 TUBA1BP68363 451 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 TUBA4AP68366 448 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 SLC35A1P78382 337 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 H3F3AP84243 136 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 VLDLRP98155 873 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 BNIP2Q12982 314 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 CEACAM7Q14002 265 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 SLC17A1Q14916 467 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 OR7A5Q15622 319 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 CHI3L2Q15782 390 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 MST1LQ2TV78 715 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 KRTAP24-1Q3LI83 254 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 ELOA3BQ3SY89 546 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 FAM174BQ3ZCQ3 159 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 SPANXN4Q5MJ08 99 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 OTUD3Q5T2D3 398 aaPredicted RBP5.61□□□□□ -1.51
SDF2-205ENST00000587629 ANXA8L1Q5VT79 327 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 SAXO2Q658L1 398 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 ZNF544Q6NX49 715 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 VHLLQ6RSH7 139 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 TUBA1AQ71U36 451 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 SSX8Q7RTT4 187 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 AAED1Q7RTV5 226 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 SPATA19Q7Z5L4 167 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 GPAT4Q86UL3 456 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 HOMEZQ8IX15 550 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 TMEM99Q8N816 258 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 ANKS4BQ8N8V4 417 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 VPS37AQ8NEZ2 397 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 ELOA3Q8NG57 546 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 OR8J2Q8NGG1 315 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 MIPOL1Q8TD10 442 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 C10orf105Q8TEF2 133 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 DDIT4LQ96D03 193 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 NEURL3Q96EH8 262 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 AURKBQ96GD4 344 aaPredicted RBP5.61□□□□□ -1.51
SDF2-205ENST00000587629 TEX37Q96LM6 180 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 ZNF385AQ96PM9 386 aaKnown RBP5.61□□□□□ -1.51
SDF2-205ENST00000587629 VRK1Q99986 396 aaPredicted RBP5.61□□□□□ -1.51
SDF2-205ENST00000587629 NAA11Q9BSU3 229 aaPredicted RBP5.61□□□□□ -1.51
SDF2-205ENST00000587629 NUF2Q9BZD4 464 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 C20orf27Q9GZN8 174 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 SAP130Q9H0E3 1048 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 RLIMQ9NVW2 624 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 PARPBPQ9NWS1 579 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 ASIC5Q9NY37 505 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 LGALS13Q9UHV8 139 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 TRAPPC4Q9Y296 219 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 SLC9A8Q9Y2E8 581 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 FLVCR1Q9Y5Y0 555 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 PMF1-BGLAPU3KQ54 211 aa5.61□□□□□ -1.51
SDF2-205ENST00000587629 SVEP1Q4LDE5 3571 aa5.6□□□□□ -1.51
SDF2-205ENST00000587629 A0A096LPE4 126 aa5.6□□□□□ -1.51
SDF2-205ENST00000587629 LOC100289279A0A1B0GTE1 492 aa5.6□□□□□ -1.51
SDF2-205ENST00000587629 A0A1W2PPZ6 126 aa5.6□□□□□ -1.51
SDF2-205ENST00000587629 CFAP73A6NFT4 308 aa5.6□□□□□ -1.51
SDF2-205ENST00000587629 CCDC154A6NI56 674 aa5.6□□□□□ -1.51
SDF2-205ENST00000587629 AGAP5A6NIR3 686 aa5.6□□□□□ -1.51
SDF2-205ENST00000587629 PDLIM1O00151 329 aa5.6□□□□□ -1.51
SDF2-205ENST00000587629 NR5A2O00482 541 aa5.6□□□□□ -1.51
SDF2-205ENST00000587629 DNPH1O43598 174 aa5.6□□□□□ -1.51
SDF2-205ENST00000587629 TYROBPO43914 113 aa5.6□□□□□ -1.51
SDF2-205ENST00000587629 LMX1BO60663 402 aa5.6□□□□□ -1.51
SDF2-205ENST00000587629 EIF1BO60739 113 aaKnown RBP5.6□□□□□ -1.51
SDF2-205ENST00000587629 LGI1O95970 557 aa5.6□□□□□ -1.51
SDF2-205ENST00000587629 WNT11O96014 354 aa5.6□□□□□ -1.51
SDF2-205ENST00000587629 NUDT17P0C025 328 aa5.6□□□□□ -1.51
SDF2-205ENST00000587629 MYZAPP0CAP1 466 aa5.6□□□□□ -1.51
SDF2-205ENST00000587629 NR2F1P10589 423 aa5.6□□□□□ -1.51
SDF2-205ENST00000587629 APEHP13798 732 aaKnown RBP5.6□□□□□ -1.51
SDF2-205ENST00000587629 SRD5A1P18405 259 aa5.6□□□□□ -1.51
SDF2-205ENST00000587629 CXCR1P25024 350 aa5.6□□□□□ -1.51
SDF2-205ENST00000587629 FKBP2P26885 142 aaKnown RBP5.6□□□□□ -1.51
SDF2-205ENST00000587629 CDKN2CP42773 168 aa5.6□□□□□ -1.51
SDF2-205ENST00000587629 SLC1A3P43003 542 aa5.6□□□□□ -1.51
SDF2-205ENST00000587629 ETV4P43268 484 aa5.6□□□□□ -1.51
SDF2-205ENST00000587629 HTR3AP46098 478 aa5.6□□□□□ -1.51
SDF2-205ENST00000587629 CLK1P49759 484 aaKnown RBP5.6□□□□□ -1.51
SDF2-205ENST00000587629 RPL14P50914 215 aaKnown RBP5.6□□□□□ -1.51
SDF2-205ENST00000587629 PRPS1P60891 318 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms