RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 CASP12Q6UXS9 341 aa15.9■□□□□ 0.14
SRSF1-208ENST00000584773 ZNF433Q8N7K0 673 aaPredicted RBP15.9■□□□□ 0.14
SRSF1-208ENST00000584773 TMEM99Q8N816 258 aa15.9■□□□□ 0.14
SRSF1-208ENST00000584773 KBTBD8Q8NFY9 601 aa15.9■□□□□ 0.14
SRSF1-208ENST00000584773 BBS10Q8TAM1 723 aa15.9■□□□□ 0.14
SRSF1-208ENST00000584773 IGFBPL1Q8WX77 278 aa15.9■□□□□ 0.14
SRSF1-208ENST00000584773 HSD17B8Q92506 261 aa15.9■□□□□ 0.14
SRSF1-208ENST00000584773 C3orf49Q96BT1 292 aa15.9■□□□□ 0.14
SRSF1-208ENST00000584773 MAGEB18Q96M61 343 aa15.9■□□□□ 0.14
SRSF1-208ENST00000584773 NPAP1Q9NZP6 1156 aa15.9■□□□□ 0.14
SRSF1-208ENST00000584773 DCTN4Q9UJW0 460 aa15.9■□□□□ 0.14
SRSF1-208ENST00000584773 FLVCR1Q9Y5Y0 555 aa15.9■□□□□ 0.14
SRSF1-208ENST00000584773 NF1P21359 2839 aa15.9■□□□□ 0.14
SRSF1-208ENST00000584773 LIPT2A6NK58 231 aa15.89■□□□□ 0.13
SRSF1-208ENST00000584773 ARAFP10398 606 aa15.89■□□□□ 0.13
SRSF1-208ENST00000584773 FKBP2P26885 142 aaKnown RBP15.89■□□□□ 0.13
SRSF1-208ENST00000584773 ATP4BP51164 291 aa15.89■□□□□ 0.13
SRSF1-208ENST00000584773 BSPH1Q075Z2 132 aa15.89■□□□□ 0.13
SRSF1-208ENST00000584773 FAPQ12884 760 aa15.89■□□□□ 0.13
SRSF1-208ENST00000584773 SLC17A1Q14916 467 aa15.89■□□□□ 0.13
SRSF1-208ENST00000584773 PPA1Q15181 289 aa15.89■□□□□ 0.13
SRSF1-208ENST00000584773 GLIPR1L2Q4G1C9 344 aa15.89■□□□□ 0.13
SRSF1-208ENST00000584773 OTUD3Q5T2D3 398 aaPredicted RBP15.89■□□□□ 0.13
SRSF1-208ENST00000584773 FBXW9Q5XUX1 488 aa15.89■□□□□ 0.13
SRSF1-208ENST00000584773 ADAM5Q6NVV9 412 aa15.89■□□□□ 0.13
SRSF1-208ENST00000584773 CIARTQ8N365 385 aaPredicted RBP15.89■□□□□ 0.13
SRSF1-208ENST00000584773 PRR14Q9BWN1 585 aa15.89■□□□□ 0.13
SRSF1-208ENST00000584773 RAD21L1Q9H4I0 556 aa15.89■□□□□ 0.13
SRSF1-208ENST00000584773 VIPAS39Q9H9C1 493 aa15.89■□□□□ 0.13
SRSF1-208ENST00000584773 BCL2L10Q9HD36 194 aa15.89■□□□□ 0.13
SRSF1-208ENST00000584773 NPHS2Q9NP85 383 aa15.89■□□□□ 0.13
SRSF1-208ENST00000584773 ARGLU1Q9NWB6 273 aaPredicted RBP15.89■□□□□ 0.13
SRSF1-208ENST00000584773 THUMPD1Q9NXG2 353 aaKnown RBP15.89■□□□□ 0.13
SRSF1-208ENST00000584773 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.89■□□□□ 0.13
SRSF1-208ENST00000584773 ZNF232Q9UNY5 417 aa15.89■□□□□ 0.13
SRSF1-208ENST00000584773 RNF115Q9Y4L5 304 aa15.89■□□□□ 0.13
SRSF1-208ENST00000584773 C5orf58C9J3I9 102 aa15.88■□□□□ 0.13
SRSF1-208ENST00000584773 TPST1O60507 370 aa15.88■□□□□ 0.13
SRSF1-208ENST00000584773 MRPL33O75394 65 aaKnown RBP15.88■□□□□ 0.13
SRSF1-208ENST00000584773 CD3EP07766 207 aa15.88■□□□□ 0.13
SRSF1-208ENST00000584773 ITGA5P08648 1049 aa15.88■□□□□ 0.13
SRSF1-208ENST00000584773 GGT1P19440 569 aa15.88■□□□□ 0.13
SRSF1-208ENST00000584773 PTH2RP49190 550 aa15.88■□□□□ 0.13
SRSF1-208ENST00000584773 COPZ1P61923 177 aa15.88■□□□□ 0.13
SRSF1-208ENST00000584773 SHEQ5VZ18 495 aa15.88■□□□□ 0.13
SRSF1-208ENST00000584773 Q71RC1 249 aaPredicted RBP15.88■□□□□ 0.13
SRSF1-208ENST00000584773 YTHDF3Q7Z739 585 aaKnown RBP15.88■□□□□ 0.13
SRSF1-208ENST00000584773 LRRC75A-AS1Q8N1F1 130 aa15.88■□□□□ 0.13
SRSF1-208ENST00000584773 OR52N5Q8NH56 324 aa15.88■□□□□ 0.13
SRSF1-208ENST00000584773 Q96MF0 132 aa15.88■□□□□ 0.13
SRSF1-208ENST00000584773 ZNF385AQ96PM9 386 aaKnown RBP15.88■□□□□ 0.13
SRSF1-208ENST00000584773 CPPED1Q9BRF8 314 aaPredicted RBP15.88■□□□□ 0.13
SRSF1-208ENST00000584773 NAA11Q9BSU3 229 aaPredicted RBP15.88■□□□□ 0.13
SRSF1-208ENST00000584773 ZNF385DQ9H6B1 395 aa15.88■□□□□ 0.13
SRSF1-208ENST00000584773 CACYBPQ9HB71 228 aaKnown RBP15.88■□□□□ 0.13
SRSF1-208ENST00000584773 ADPRHL2Q9NX46 363 aa15.88■□□□□ 0.13
SRSF1-208ENST00000584773 IFT52Q9Y366 437 aa15.88■□□□□ 0.13
SRSF1-208ENST00000584773 TRIM64A6NGJ6 449 aa15.87■□□□□ 0.13
SRSF1-208ENST00000584773 TRIM64BA6NI03 449 aa15.87■□□□□ 0.13
SRSF1-208ENST00000584773 OR5H1A6NKK0 313 aa15.87■□□□□ 0.13
SRSF1-208ENST00000584773 CCT8L1PA6NM43 557 aa15.87■□□□□ 0.13
SRSF1-208ENST00000584773 TMEM229AB2RXF0 380 aa15.87■□□□□ 0.13
SRSF1-208ENST00000584773 GPR171O14626 319 aa15.87■□□□□ 0.13
SRSF1-208ENST00000584773 EIF1BO60739 113 aaKnown RBP15.87■□□□□ 0.13
SRSF1-208ENST00000584773 EDF1O60869 148 aaKnown RBP15.87■□□□□ 0.13
SRSF1-208ENST00000584773 HTR2AP28223 471 aa15.87■□□□□ 0.13
SRSF1-208ENST00000584773 AQP1P29972 269 aa15.87■□□□□ 0.13
SRSF1-208ENST00000584773 P2RY4P51582 365 aa15.87■□□□□ 0.13
SRSF1-208ENST00000584773 CDK6Q00534 326 aa15.87■□□□□ 0.13
SRSF1-208ENST00000584773 SF3A3Q12874 501 aaKnown RBP eCLIP15.87■□□□□ 0.131e-11■■■■□ 20.2
SRSF1-208ENST00000584773 SELPLGQ14242 412 aa15.87■□□□□ 0.13
SRSF1-208ENST00000584773 TSPO2Q5TGU0 170 aa15.87■□□□□ 0.13
SRSF1-208ENST00000584773 PRAMEF8Q5VWM4 474 aa15.87■□□□□ 0.13
SRSF1-208ENST00000584773 PRAMEF7Q5VXH5 474 aa15.87■□□□□ 0.13
SRSF1-208ENST00000584773 PAQR6Q6TCH4 344 aa15.87■□□□□ 0.13
SRSF1-208ENST00000584773 DLEU7Q6UYE1 221 aa15.87■□□□□ 0.13
SRSF1-208ENST00000584773 RETREG3Q86VR2 466 aa15.87■□□□□ 0.13
SRSF1-208ENST00000584773 ZNF611Q8N823 705 aa15.87■□□□□ 0.13
SRSF1-208ENST00000584773 ZIC4Q8N9L1 334 aa15.87■□□□□ 0.13
SRSF1-208ENST00000584773 WFDC6Q9BQY6 131 aa15.87■□□□□ 0.13
SRSF1-208ENST00000584773 ESRP2Q9H6T0 727 aaKnown RBP15.87■□□□□ 0.13
SRSF1-208ENST00000584773 SLC7A10Q9NS82 523 aa15.87■□□□□ 0.13
SRSF1-208ENST00000584773 ASB6Q9NWX5 421 aa15.87■□□□□ 0.13
SRSF1-208ENST00000584773 LAMP3Q9UQV4 416 aa15.87■□□□□ 0.13
SRSF1-208ENST00000584773 A0A1W2PP18 115 aa15.86■□□□□ 0.13
SRSF1-208ENST00000584773 CIB4A0PJX0 185 aa15.86■□□□□ 0.13
SRSF1-208ENST00000584773 A8MVM7 634 aa15.86■□□□□ 0.13
SRSF1-208ENST00000584773 ARHGEF9O43307 516 aa15.86■□□□□ 0.13
SRSF1-208ENST00000584773 CNOT4O95628 575 aaKnown RBP15.86■□□□□ 0.13
SRSF1-208ENST00000584773 GPIP06744 558 aa15.86■□□□□ 0.13
SRSF1-208ENST00000584773 SOD3P08294 240 aa15.86■□□□□ 0.13
SRSF1-208ENST00000584773 LGALS3BPQ08380 585 aa15.86■□□□□ 0.13
SRSF1-208ENST00000584773 SPOCK1Q08629 439 aa15.86■□□□□ 0.13
SRSF1-208ENST00000584773 SCARB2Q14108 478 aa15.86■□□□□ 0.13
SRSF1-208ENST00000584773 ADRM1Q16186 407 aa15.86■□□□□ 0.13
SRSF1-208ENST00000584773 TIMM23BQ5SRD1 257 aa15.86■□□□□ 0.13
SRSF1-208ENST00000584773 C1orf140Q5VVS0 124 aa15.86■□□□□ 0.13
SRSF1-208ENST00000584773 GPAT4Q86UL3 456 aa15.86■□□□□ 0.13
SRSF1-208ENST00000584773 OR9K2Q8NGE7 335 aa15.86■□□□□ 0.13
SRSF1-208ENST00000584773 TMEM171Q8WVE6 324 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 189.7 ms