RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 LOC100653049A0A140TA62 436 aa12.39□□□□□ -0.43
GGA3-215ENST00000582821 LIPT2A6NK58 231 aa12.39□□□□□ -0.43
GGA3-215ENST00000582821 ZNF814B7Z6K7 855 aa12.39□□□□□ -0.43
GGA3-215ENST00000582821 MRASO14807 208 aa12.39□□□□□ -0.43
GGA3-215ENST00000582821 FRS3O43559 492 aa12.39□□□□□ -0.43
GGA3-215ENST00000582821 CCDC22O60826 627 aa12.39□□□□□ -0.43
GGA3-215ENST00000582821 KRT34O76011 436 aa12.39□□□□□ -0.43
GGA3-215ENST00000582821 GPIP06744 558 aa12.39□□□□□ -0.43
GGA3-215ENST00000582821 HOXC5Q00444 222 aa12.39□□□□□ -0.43
GGA3-215ENST00000582821 GLIPR1L2Q4G1C9 344 aa12.39□□□□□ -0.43
GGA3-215ENST00000582821 INTS11Q5TA45 600 aaKnown RBP12.39□□□□□ -0.43
GGA3-215ENST00000582821 REP15Q6BDI9 236 aa12.39□□□□□ -0.43
GGA3-215ENST00000582821 C22orf34Q6ZV56 151 aa12.39□□□□□ -0.43
GGA3-215ENST00000582821 CCDC80Q76M96 950 aa12.39□□□□□ -0.43
GGA3-215ENST00000582821 PATL1Q86TB9 770 aaKnown RBP12.39□□□□□ -0.43
GGA3-215ENST00000582821 SNX32Q86XE0 403 aa12.39□□□□□ -0.43
GGA3-215ENST00000582821 CCDC103Q8IW40 242 aa12.39□□□□□ -0.43
GGA3-215ENST00000582821 PCYOX1LQ8NBM8 494 aa12.39□□□□□ -0.43
GGA3-215ENST00000582821 STEAP2Q8NFT2 490 aa12.39□□□□□ -0.43
GGA3-215ENST00000582821 RP9Q8TA86 221 aaKnown RBP12.39□□□□□ -0.43
GGA3-215ENST00000582821 USB1Q9BQ65 265 aaKnown RBP12.39□□□□□ -0.43
GGA3-215ENST00000582821 GID8Q9NWU2 228 aa12.39□□□□□ -0.43
GGA3-215ENST00000582821 KLHL28Q9NXS3 571 aa12.39□□□□□ -0.43
GGA3-215ENST00000582821 CADP27708 2225 aa12.39□□□□□ -0.43
GGA3-215ENST00000582821 DEFB108AA8MXU0 73 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 FMO6PO60774 539 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 FZD7O75084 574 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 LGI1O95970 557 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 THBDP07204 575 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 HTR2AP28223 471 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 AQP1P29972 269 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 IDUAP35475 653 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 BNIP2Q12982 314 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 ITGADQ13349 1161 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 CEACAM7Q14002 265 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 VEZF1Q14119 521 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 DUSP7Q16829 419 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 VMACQ2NL98 169 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 SFRP5Q5T4F7 317 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 C1orf140Q5VVS0 124 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 FAM91A1Q658Y4 838 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 C5orf46Q6UWT4 87 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 Q6ZT83 130 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 CXorf67Q86X51 503 aaPredicted RBP12.38□□□□□ -0.43
GGA3-215ENST00000582821 MFSD8Q8NHS3 518 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 NINJ1Q92982 152 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 ZNF775Q96BV0 537 aaPredicted RBP12.38□□□□□ -0.43
GGA3-215ENST00000582821 ZNF583Q96ND8 569 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 ECSITQ9BQ95 431 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 SF3B5Q9BWJ5 86 aaKnown RBP12.38□□□□□ -0.43
GGA3-215ENST00000582821 PLEKHF2Q9H8W4 249 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 RPS6KB2Q9UBS0 482 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 TESQ9UGI8 421 aaKnown RBP12.38□□□□□ -0.43
GGA3-215ENST00000582821 EDARQ9UNE0 448 aa12.38□□□□□ -0.43
GGA3-215ENST00000582821 A0A1B0GWA3 101 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 AQP7P3A6NL99 342 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 SIAH2O43255 324 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 TPST2O60704 377 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 RAMP1O60894 148 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 VAMP5O95183 116 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 ADAP00813 363 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 PNMTP11086 282 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 DNAJA1P31689 397 aaKnown RBP12.37□□□□□ -0.43
GGA3-215ENST00000582821 NTF4P34130 210 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 EGR4Q05215 589 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 SLC17A1Q14916 467 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 OR1Q1Q15612 314 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 OR7A5Q15622 319 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 RABL3Q5HYI8 236 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 ANKRD34AQ69YU3 496 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 ERICH5Q6P6B1 374 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 ULK3Q6PHR2 472 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 SPATA21Q7Z572 469 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 ZNF100Q8IYN0 542 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 OR52E4Q8NGH9 312 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 SLC38A4Q969I6 547 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 DNAJA3Q96EY1 480 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 ARHGDIGQ99819 225 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 WFDC6Q9BQY6 131 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 TAPBPLQ9BX59 468 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 ACTR6Q9GZN1 396 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 TMEM27Q9HBJ8 222 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 PARPBPQ9NWS1 579 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 ARMCX1Q9P291 453 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 SLC13A4Q9UKG4 626 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 AP3M1Q9Y2T2 418 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 NOSIPQ9Y314 301 aaKnown RBP12.37□□□□□ -0.43
GGA3-215ENST00000582821 FLVCR1Q9Y5Y0 555 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 PRRC2AP48634 2157 aaKnown RBP12.37□□□□□ -0.43
GGA3-215ENST00000582821 ARID1AO14497 2285 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 CELSR1Q9NYQ6 3014 aa12.37□□□□□ -0.43
GGA3-215ENST00000582821 A0A087WUJ7 227 aa12.36□□□□□ -0.43
GGA3-215ENST00000582821 A0A0B4J2E0 115 aa12.36□□□□□ -0.43
GGA3-215ENST00000582821 A0A1B0GX12 115 aa12.36□□□□□ -0.43
GGA3-215ENST00000582821 A0A1W2PPR1 153 aa12.36□□□□□ -0.43
GGA3-215ENST00000582821 ELOA3DA6NLF2 546 aaPredicted RBP12.36□□□□□ -0.43
GGA3-215ENST00000582821 FTCDNL1E5RQL4 147 aa12.36□□□□□ -0.43
GGA3-215ENST00000582821 KLF4O43474 513 aa12.36□□□□□ -0.43
GGA3-215ENST00000582821 MRPL33O75394 65 aaKnown RBP12.36□□□□□ -0.43
GGA3-215ENST00000582821 AHSA1O95433 338 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms