RNA–Protein interactions for RNA: ENST00000525004.5

UBXN1-205, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-205ENST00000525004 CCNA2P20248 432 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 FASP25445 335 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 DIO1P49895 249 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 CARD18P57730 90 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 RPS3AP61247 264 aaKnown RBP12.58□□□□□ -0.4
UBXN1-205ENST00000525004 ELF3P78545 371 aaPredicted RBP12.58□□□□□ -0.4
UBXN1-205ENST00000525004 LSM11P83369 360 aaKnown RBP eCLIP12.58□□□□□ -0.4
UBXN1-205ENST00000525004 SPIBQ01892 262 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 PRKCDQ05655 676 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 LTBQ06643 244 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 C19orf57Q0VDD7 668 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 SF3B4Q15427 424 aaKnown RBP eCLIP12.58□□□□□ -0.41e-7■■□□□ 12
UBXN1-205ENST00000525004 SEC23BQ15437 767 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 PDSS1Q5T2R2 415 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 FAM69AQ5T7M9 428 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 MBOAT2Q6ZWT7 520 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 DOLPP1Q86YN1 238 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 INTS1Q8N201 2190 aaKnown RBP12.58□□□□□ -0.4
UBXN1-205ENST00000525004 LINC00471Q8N535 108 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 ATP6V1C2Q8NEY4 427 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 OR10D3Q8NH80 312 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 OSTF1Q92882 214 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 NRBF2Q96F24 287 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 ALPK1Q96QP1 1244 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 OR5B2Q96R09 309 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 KLHL4Q9C0H6 718 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 CALHM2Q9HA72 323 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 PNPLA3Q9NST1 481 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 VNN3Q9NY84 501 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 MED31Q9Y3C7 131 aa12.58□□□□□ -0.4
UBXN1-205ENST00000525004 CD8B2A6NJW9 211 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 SULT2B1O00204 365 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 TNFRSF11BO00300 401 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 EIF1AYO14602 144 aaKnown RBP12.57□□□□□ -0.4
UBXN1-205ENST00000525004 PRRG2O14669 202 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 AHSA1O95433 338 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 MT-ATP6P00846 226 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 STSP08842 583 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 TSPAN19P0C672 248 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 TFPIP10646 304 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 ABOP16442 354 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 DNAJA1P31689 397 aaKnown RBP12.57□□□□□ -0.4
UBXN1-205ENST00000525004 IDUAP35475 653 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 CSNK2A1P68400 391 aaPredicted RBP12.57□□□□□ -0.4
UBXN1-205ENST00000525004 SLC35A1P78382 337 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 MFSD13AQ14CX5 517 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 ZNF74Q16587 644 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 HBMQ6B0K9 141 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 RTL6Q6ICC9 239 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 ZNF770Q6IQ21 691 aaPredicted RBP12.57□□□□□ -0.4
UBXN1-205ENST00000525004 HMBOX1Q6NT76 420 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 TBPL2Q6SJ96 375 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 TMPRSS11FQ6ZWK6 438 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 LSRQ86X29 649 aaPredicted RBP12.57□□□□□ -0.4
UBXN1-205ENST00000525004 UBQLNLQ8IYU4 475 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 OR52J3Q8NH60 311 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 RNF217Q8TC41 542 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 LRTOMTQ8WZ04 291 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 SMPDL3BQ92485 455 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 CPNE4Q96A23 557 aaPredicted RBP12.57□□□□□ -0.4
UBXN1-205ENST00000525004 TUBA1CQ9BQE3 449 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 PSD2Q9BQI7 771 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 BDH2Q9BUT1 245 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 TP63Q9H3D4 680 aaPredicted RBP12.57□□□□□ -0.4
UBXN1-205ENST00000525004 REEP1Q9H902 201 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 TIGARQ9NQ88 270 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 C20orf141Q9NUB4 165 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 CLCF1Q9UBD9 225 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 CAMK2AQ9UQM7 478 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 SAMHD1Q9Y3Z3 626 aaKnown RBP12.57□□□□□ -0.4
UBXN1-205ENST00000525004 ZNF175Q9Y473 711 aa12.57□□□□□ -0.4
UBXN1-205ENST00000525004 ARRDC5A6NEK1 342 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 FIGNL2A6NMB9 653 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 SEC14L5O43304 696 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 KLF4O43474 513 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 EIF1BO60739 113 aaKnown RBP12.56□□□□□ -0.4
UBXN1-205ENST00000525004 LDLRP01130 860 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 TPOP07202 933 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 ASAH2BP0C7U1 165 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 FPR1P21462 350 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 RPS5P46782 204 aaKnown RBP12.56□□□□□ -0.4
UBXN1-205ENST00000525004 OMPP47874 163 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 P2RY4P51582 365 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 SRYQ05066 204 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 C3AR1Q16581 482 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 MICAQ29983 383 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 EXOC3L2Q2M3D2 409 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 NSUN5P2Q63ZY6 315 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 C1orf94Q6P1W5 598 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 PAQR6Q6TCH4 344 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 ZNF730Q6ZMV8 503 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 PRICKLE2Q7Z3G6 844 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 SLC46A3Q7Z3Q1 461 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 ZER1Q7Z7L7 766 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 TMEM179BQ7Z7N9 219 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 CD163Q86VB7 1156 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 P3H2Q8IVL5 708 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 NRMQ8IXM6 262 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 OR4K5Q8NGD3 323 aa12.56□□□□□ -0.4
UBXN1-205ENST00000525004 PFN4Q8NHR9 129 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms